{"id":"https://openalex.org/W1852325076","doi":"https://doi.org/10.1186/1471-2105-7-158","title":"2DDB \u2013 a bioinformatics solution for analysis of quantitative proteomics data","display_name":"2DDB \u2013 a bioinformatics solution for analysis of quantitative proteomics data","publication_year":2006,"publication_date":"2006-03-20","ids":{"openalex":"https://openalex.org/W1852325076","doi":"https://doi.org/10.1186/1471-2105-7-158","mag":"1852325076","pmid":"https://pubmed.ncbi.nlm.nih.gov/16549013"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-7-158","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-158","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-158","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-158","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5089221737","display_name":"Lars Malmstr\u00f6m","orcid":"https://orcid.org/0000-0001-9885-9312"},"institutions":[{"id":"https://openalex.org/I187531555","display_name":"Lund University","ror":"https://ror.org/012a77v79","country_code":"SE","type":"education","lineage":["https://openalex.org/I187531555"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"Lars Malmstr\u00f6m","raw_affiliation_strings":["Department of Electrical Measurements, LTH, P,O Box 118, SE-221 00, Lund, Sweden. lars.malmstrom@elmat.lth.se","Department of Electrical Measurements, LTH, P.O Box 118, SE-221 00, Lund, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Measurements, LTH, P,O Box 118, SE-221 00, Lund, Sweden. lars.malmstrom@elmat.lth.se","institution_ids":[]},{"raw_affiliation_string":"Department of Electrical Measurements, LTH, P.O Box 118, SE-221 00, Lund, Sweden","institution_ids":["https://openalex.org/I187531555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025688013","display_name":"Gy\u00f6rgy Marko\u2010Varga","orcid":"https://orcid.org/0000-0001-7140-8925"},"institutions":[{"id":"https://openalex.org/I187531555","display_name":"Lund University","ror":"https://ror.org/012a77v79","country_code":"SE","type":"education","lineage":["https://openalex.org/I187531555"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Gy\u00f6rgy Marko-Varga","raw_affiliation_strings":["Department of Analytical Chemistry, Lund University, SE-221 87, Lund, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Analytical Chemistry, Lund University, SE-221 87, Lund, Sweden","institution_ids":["https://openalex.org/I187531555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070146866","display_name":"Gunilla Westergren\u2010Thorsson","orcid":"https://orcid.org/0000-0001-5327-8805"},"institutions":[{"id":"https://openalex.org/I187531555","display_name":"Lund University","ror":"https://ror.org/012a77v79","country_code":"SE","type":"education","lineage":["https://openalex.org/I187531555"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Gunilla Westergren-Thorsson","raw_affiliation_strings":["Department of Cell and Molecular Biology, C13, BMC, University of Lund, SE-221 84, Lund, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cell and Molecular Biology, C13, BMC, University of Lund, SE-221 84, Lund, Sweden","institution_ids":["https://openalex.org/I187531555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053411065","display_name":"Thomas Laurell","orcid":"https://orcid.org/0000-0002-2486-3607"},"institutions":[{"id":"https://openalex.org/I187531555","display_name":"Lund University","ror":"https://ror.org/012a77v79","country_code":"SE","type":"education","lineage":["https://openalex.org/I187531555"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"Thomas Laurell","raw_affiliation_strings":["Department of Electrical Measurements, LTH, P.O Box 118, SE-221 00, Lund, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical Measurements, LTH, P.O Box 118, SE-221 00, Lund, Sweden","institution_ids":["https://openalex.org/I187531555"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5036451897","display_name":"Johan Malmstr\u00f6m","orcid":"https://orcid.org/0000-0002-2889-7169"},"institutions":[{"id":"https://openalex.org/I187531555","display_name":"Lund University","ror":"https://ror.org/012a77v79","country_code":"SE","type":"education","lineage":["https://openalex.org/I187531555"]},{"id":"https://openalex.org/I35440088","display_name":"ETH Zurich","ror":"https://ror.org/05a28rw58","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I35440088"]},{"id":"https://openalex.org/I4210142651","display_name":"Wolfgang Pauli Institute","ror":"https://ror.org/048qkq105","country_code":"AT","type":"education","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210142651"]}],"countries":["AT","CH","SE"],"is_corresponding":false,"raw_author_name":"Johan Malmstr\u00f6m","raw_affiliation_strings":["Department of Cell and Molecular Biology, C13, BMC, University of Lund, SE-221 84, Lund, Sweden","Institute for Molecular Systems Biology, ETH H\u00f6nggerberg, HPT E 53, Wolfgang Pauli-Str. 16, CH-8093, Z\u00fcrich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Cell and Molecular Biology, C13, BMC, University of Lund, SE-221 84, Lund, Sweden","institution_ids":["https://openalex.org/I187531555"]},{"raw_affiliation_string":"Institute for Molecular Systems Biology, ETH H\u00f6nggerberg, HPT E 53, Wolfgang Pauli-Str. 16, CH-8093, Z\u00fcrich, Switzerland","institution_ids":["https://openalex.org/I35440088","https://openalex.org/I4210142651"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5089221737"],"corresponding_institution_ids":["https://openalex.org/I187531555"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.1471,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.7352132,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"7","issue":"1","first_page":"158","last_page":"158"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9355999827384949,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9355999827384949,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T14364","display_name":"Clusterin in disease pathology","score":0.010300000198185444,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.00559999980032444,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.6840535998344421},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5579546689987183},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5167979001998901},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5129179954528809},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.44531989097595215},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.44277510046958923},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.28249573707580566},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12192434072494507},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.05954363942146301},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.056043803691864014}],"concepts":[{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.6840535998344421},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5579546689987183},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5167979001998901},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5129179954528809},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.44531989097595215},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.44277510046958923},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.28249573707580566},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12192434072494507},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.05954363942146301},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.056043803691864014}],"mesh":[{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003628","descriptor_name":"Database Management Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1186/1471-2105-7-158","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-158","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-158","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16549013","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16549013","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:185784","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1435938","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1435938","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1435938","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:c8cd5291afc34036bd5322ad92349c10","is_oa":false,"landing_page_url":"https://doaj.org/article/c8cd5291afc34036bd5322ad92349c10","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 7, Iss 1, p 158 (2006)","raw_type":"article"},{"id":"pmh:oai:lup.lub.lu.se:c48f32ff-0a51-49fe-ad8d-2732ed46ca3e","is_oa":false,"landing_page_url":"https://lup.lub.lu.se/record/749035","pdf_url":null,"source":{"id":"https://openalex.org/S4306400536","display_name":"Lund University Publications (Lund University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I187531555","host_organization_name":"Lund University","host_organization_lineage":["https://openalex.org/I187531555"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1471-2105","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:www.research-collection.ethz.ch:20.500.11850/37099","is_oa":true,"landing_page_url":"http://hdl.handle.net/20.500.11850/37099","pdf_url":null,"source":{"id":"https://openalex.org/S4306402302","display_name":"Repository for Publications and Research Data (ETH Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I35440088","host_organization_name":"ETH Zurich","host_organization_lineage":["https://openalex.org/I35440088"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 7","raw_type":"info:eu-repo/semantics/article"},{"id":"doi:10.3929/ethz-b-000037099","is_oa":true,"landing_page_url":"https://doi.org/10.3929/ethz-b-000037099","pdf_url":null,"source":{"id":"https://openalex.org/S7407051236","display_name":"ETH Z\u00fcrich Research Collection","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-7-158","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-7-158","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-7-158","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.4699999988079071,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1852325076.pdf","grobid_xml":"https://content.openalex.org/works/W1852325076.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1797925867","https://openalex.org/W1836367264","https://openalex.org/W1981593008","https://openalex.org/W2004407704","https://openalex.org/W2015556811","https://openalex.org/W2024101066","https://openalex.org/W2051997502","https://openalex.org/W2057761395","https://openalex.org/W2059572899","https://openalex.org/W2072849975","https://openalex.org/W2086216615","https://openalex.org/W2096525273","https://openalex.org/W2096721473","https://openalex.org/W2101595316","https://openalex.org/W2103017472","https://openalex.org/W2106882534","https://openalex.org/W2110041134","https://openalex.org/W2112078820","https://openalex.org/W2114083522","https://openalex.org/W2119452210","https://openalex.org/W2146103026","https://openalex.org/W2152235308","https://openalex.org/W2153187042","https://openalex.org/W2158714788","https://openalex.org/W2161529001","https://openalex.org/W4241391257","https://openalex.org/W4246395620","https://openalex.org/W4255619361"],"related_works":["https://openalex.org/W1488408180","https://openalex.org/W2360290178","https://openalex.org/W3005464483","https://openalex.org/W415785311","https://openalex.org/W3145527116","https://openalex.org/W2350543355","https://openalex.org/W3143512440","https://openalex.org/W2389042962","https://openalex.org/W1979675584","https://openalex.org/W2088324202"],"abstract_inverted_index":{"BACKGROUND:":[0],"We":[1],"present":[2],"2DDB,":[3],"a":[4,45,137],"bioinformatics":[5],"solution":[6],"for":[7,35,108,169],"storage,":[8],"integration":[9],"and":[10,20,55,84,102,110,123],"analysis":[11,37,147,159],"of":[12,66,76,81,97,139,148,160],"quantitative":[13,117,143],"proteomics":[14,31],"data.":[15,78,99],"As":[16],"the":[17,21,30,33,67,77,91],"data":[18,47,60,69,118],"complexity":[19],"rate":[22],"with":[23],"which":[24],"it":[25],"is":[26,42,106,167],"produced":[27],"increases":[28],"in":[29,136],"field,":[32],"need":[34],"flexible":[36],"software":[38,131,166],"increases.":[39],"RESULTS:":[40],"2DDB":[41],"based":[43,146],"on":[44,64],"core":[46,68],"model":[48,70],"describing":[49],"fundamentals":[50],"such":[51],"as":[52],"experiment":[53],"description":[54],"identified":[56],"proteins.":[57],"The":[58,113,130,165],"extended":[59],"models":[61],"are":[62],"built":[63],"top":[65],"to":[71,94,154],"capture":[72],"more":[73],"specific":[74],"aspects":[75],"A":[79,100],"number":[80,138],"public":[82],"databases":[83],"bioinformatical":[85],"tools":[86],"have":[87],"been":[88,134],"integrated":[89],"giving":[90],"user":[92],"access":[93],"large":[95],"amounts":[96],"relevant":[98],"statistical":[101,109],"graphical":[103,111],"package,":[104],"R,":[105],"used":[107],"analysis.":[112],"current":[114],"implementation":[115],"handles":[116],"from":[119,142,162],"2D":[120,155],"gel":[121,156],"electrophoresis":[122],"multidimensional":[124],"liquid":[125],"chromatography/mass":[126],"spectrometry":[127,145,158],"experiments.":[128],"CONCLUSION:":[129],"has":[132],"successfully":[133],"employed":[135],"projects":[140],"ranging":[141],"liquid-chromatography-mass":[144],"transforming":[149],"growth":[150],"factor-beta":[151],"stimulated":[152],"fi-broblasts":[153],"electrophoresis/mass":[157],"biopsies":[161],"human":[163],"cervix.":[164],"available":[168],"download":[170],"at":[171],"SourceForge.":[172]},"counts_by_year":[{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":4}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
