{"id":"https://openalex.org/W2119437394","doi":"https://doi.org/10.1186/1471-2105-6-s4-s14","title":"Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical role in cell-cycle control","display_name":"Mining published lists of cancer related microarray experiments: Identification of a gene expression signature having a critical role in cell-cycle control","publication_year":2005,"publication_date":"2005-12-01","ids":{"openalex":"https://openalex.org/W2119437394","doi":"https://doi.org/10.1186/1471-2105-6-s4-s14","mag":"2119437394","pmid":"https://pubmed.ncbi.nlm.nih.gov/16351740"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-6-s4-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-6-s4-s14","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S4-S14","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S4-S14","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5031600072","display_name":"Giacomo Finocchiaro","orcid":null},"institutions":[{"id":"https://openalex.org/I4210123579","display_name":"Ripamonti","ror":"https://ror.org/03vcgp521","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210123579"]},{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giacomo Finocchiaro","raw_affiliation_strings":["European Institute of Oncology, Via Ripamonti 435, 20141 Milan, Italy. Giacomo.finocchiaro@ifom-ieo-campus.it","European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy","IFOM Foundation, Via Adamello 16, 20139, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Institute of Oncology, Via Ripamonti 435, 20141 Milan, Italy. Giacomo.finocchiaro@ifom-ieo-campus.it","institution_ids":["https://openalex.org/I6141010"]},{"raw_affiliation_string":"European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy","institution_ids":["https://openalex.org/I6141010","https://openalex.org/I4210123579"]},{"raw_affiliation_string":"IFOM Foundation, Via Adamello 16, 20139, Milan, Italy","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028414313","display_name":"Francesco M. Mancuso","orcid":"https://orcid.org/0000-0001-5499-6630"},"institutions":[{"id":"https://openalex.org/I4210123579","display_name":"Ripamonti","ror":"https://ror.org/03vcgp521","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210123579"]},{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Francesco Mancuso","raw_affiliation_strings":["European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy","IFOM Foundation, Via Adamello 16, 20139, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy","institution_ids":["https://openalex.org/I6141010","https://openalex.org/I4210123579"]},{"raw_affiliation_string":"IFOM Foundation, Via Adamello 16, 20139, Milan, Italy","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066665224","display_name":"Heiko M\u00fcller","orcid":"https://orcid.org/0000-0001-9873-3146"},"institutions":[{"id":"https://openalex.org/I4210123579","display_name":"Ripamonti","ror":"https://ror.org/03vcgp521","country_code":"IT","type":"company","lineage":["https://openalex.org/I4210123579"]},{"id":"https://openalex.org/I6141010","display_name":"European Institute of Oncology","ror":"https://ror.org/02vr0ne26","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210153126","https://openalex.org/I6141010"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Heiko Muller","raw_affiliation_strings":["European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy","IFOM Foundation, Via Adamello 16, 20139, Milan, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Institute of Oncology, Via Ripamonti 435, 20141, Milan, Italy","institution_ids":["https://openalex.org/I6141010","https://openalex.org/I4210123579"]},{"raw_affiliation_string":"IFOM Foundation, Via Adamello 16, 20139, Milan, Italy","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5066665224"],"corresponding_institution_ids":["https://openalex.org/I4210123579","https://openalex.org/I6141010"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.5169,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.81342679,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"6","issue":"S4","first_page":"S14","last_page":"S14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9197999835014343,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9197999835014343,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.03700000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.007000000216066837,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.681907594203949},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6548808813095093},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6124314665794373},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6048058271408081},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6011713147163391},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.5615919232368469},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5211134552955627},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.49487894773483276},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.4478955864906311},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.4470840096473694},{"id":"https://openalex.org/keywords/gene-signature","display_name":"Gene signature","score":0.41225725412368774},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3634979724884033},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35248318314552307},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3503425717353821},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3399241268634796}],"concepts":[{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.681907594203949},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6548808813095093},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6124314665794373},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6048058271408081},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6011713147163391},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.5615919232368469},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5211134552955627},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.49487894773483276},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.4478955864906311},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.4470840096473694},{"id":"https://openalex.org/C2779733811","wikidata":"https://www.wikidata.org/wiki/Q5531562","display_name":"Gene signature","level":4,"score":0.41225725412368774},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3634979724884033},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35248318314552307},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3503425717353821},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3399241268634796},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002453","descriptor_name":"Cell Cycle","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012107","descriptor_name":"Research Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015233","descriptor_name":"Models, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015514","descriptor_name":"Oncogene Proteins, Fusion","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D015514","descriptor_name":"Oncogene Proteins, Fusion","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D015514","descriptor_name":"Oncogene Proteins, Fusion","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015972","descriptor_name":"Gene Expression Regulation, Neoplastic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016160","descriptor_name":"Retinoblastoma Protein","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D016160","descriptor_name":"Retinoblastoma Protein","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D016160","descriptor_name":"Retinoblastoma Protein","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019941","descriptor_name":"Cyclin-Dependent Kinase Inhibitor p16","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D019941","descriptor_name":"Cyclin-Dependent Kinase Inhibitor p16","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D019941","descriptor_name":"Cyclin-Dependent Kinase Inhibitor p16","qualifier_ui":"Q000096","qualifier_name":"biosynthesis","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034802","descriptor_name":"RNA-Binding Protein EWS","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034802","descriptor_name":"RNA-Binding Protein EWS","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034802","descriptor_name":"RNA-Binding Protein EWS","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051789","descriptor_name":"Proto-Oncogene Protein c-fli-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051789","descriptor_name":"Proto-Oncogene Protein c-fli-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051789","descriptor_name":"Proto-Oncogene Protein c-fli-1","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-6-s4-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-6-s4-s14","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S4-S14","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16351740","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16351740","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:459908","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1866394","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1866394","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1866394","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-6-s4-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-6-s4-s14","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S4-S14","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323054","display_name":"Associazione Italiana per la Ricerca sul Cancro","ror":"https://ror.org/02g2x7380"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2119437394.pdf","grobid_xml":"https://content.openalex.org/works/W2119437394.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W1970156673","https://openalex.org/W1972295452","https://openalex.org/W1973614663","https://openalex.org/W1984328656","https://openalex.org/W2018843280","https://openalex.org/W2020541351","https://openalex.org/W2034260252","https://openalex.org/W2043329626","https://openalex.org/W2051912517","https://openalex.org/W2100471807","https://openalex.org/W2109972881","https://openalex.org/W2110065044","https://openalex.org/W2124201592","https://openalex.org/W2132786809","https://openalex.org/W2136182072","https://openalex.org/W2138247507","https://openalex.org/W2142437744","https://openalex.org/W2146264532","https://openalex.org/W2151526351","https://openalex.org/W2158940923","https://openalex.org/W2162871532","https://openalex.org/W2165728940","https://openalex.org/W2168459422","https://openalex.org/W2169536307","https://openalex.org/W2417702641","https://openalex.org/W3124412114","https://openalex.org/W4253759977"],"related_works":["https://openalex.org/W3152114242","https://openalex.org/W2796636403","https://openalex.org/W170658859","https://openalex.org/W1547158732","https://openalex.org/W2151007749","https://openalex.org/W2028324514","https://openalex.org/W2074092657","https://openalex.org/W4310366902","https://openalex.org/W1483316219","https://openalex.org/W3023720143"],"abstract_inverted_index":{"BACKGROUND:":[0],"Routine":[1],"application":[2],"of":[3,13,19,23,43,62,74,84,91,107,132,148,165,171,184,192,201,208,229],"gene":[4,86,124,203,212,232],"expression":[5,213,233],"microarray":[6,26,119,234],"technology":[7],"is":[8,37],"rapidly":[9],"producing":[10],"large":[11],"amounts":[12],"data":[14,45,167],"that":[15,109,199],"necessitate":[16],"new":[17],"approaches":[18],"analysis.":[20,101],"The":[21],"analysis":[22,164],"a":[24,82,144,216],"specific":[25],"experiment":[27],"profits":[28],"enormously":[29],"from":[30],"cross-comparing":[31],"to":[32,52,65,94,97,219],"other":[33],"experiments.":[34],"This":[35],"process":[36],"generally":[38],"performed":[39],"by":[40,135,157,190],"numerical":[41,100,163,209],"meta-analysis":[42],"published":[44,63,85,202],"where":[46],"the":[47,50,59,72,89,136,158,178,181,185,206,227],"researcher":[48],"chooses":[49],"datasets":[51,64,93],"be":[53,95],"analyzed":[54],"based":[55],"on":[56],"assumptions":[57],"about":[58,211],"biological":[60],"relations":[61],"his":[66],"own":[67],"data,":[68],"thus":[69],"severely":[70],"limiting":[71],"possibility":[73],"finding":[75],"surprising":[76],"connections.":[77],"Here":[78],"we":[79],"propose":[80],"using":[81],"repository":[83],"lists":[87,106,125,131,204],"for":[88,126],"identification":[90,228],"interesting":[92],"subjected":[96],"more":[98],"detailed":[99],"RESULTS:":[102],"We":[103,121,142,197],"have":[104,110],"compiled":[105],"genes":[108,133,153,155,172],"been":[111],"reported":[112],"as":[113,188],"differentially":[114],"regulated":[115,134,156],"in":[116,177,205],"cancer":[117],"related":[118,231],"studies.":[120],"searched":[122],"these":[123,166],"statistically":[127],"significant":[128,146],"overlaps":[129],"with":[130,154,173],"tumor":[137],"suppressors":[138],"p16":[139,149],"and":[140,150,180,223],"pRB.":[141],"identified":[143,168],"highly":[145],"overlap":[147],"pRB":[151],"target":[152],"EWS/FLI":[159],"fusion":[160],"protein.":[161],"Detailed":[162],"two":[169],"sets":[170],"clearly":[174],"distinct":[175],"roles":[176],"G1/S":[179],"G2/M":[182],"phases":[183],"cell":[186],"cycle,":[187],"measured":[189],"enrichment":[191],"Gene":[193],"Ontology":[194],"categories.":[195],"CONCLUSION:":[196],"show":[198],"mining":[200],"absence":[207],"detail":[210],"levels":[214],"constitutes":[215],"fast,":[217],"easy":[218],"perform,":[220],"widely":[221],"applicable,":[222],"unbiased":[224],"route":[225],"towards":[226],"biologically":[230],"datasets.":[235]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2025-10-10T00:00:00"}
