{"id":"https://openalex.org/W2144120272","doi":"https://doi.org/10.1186/1471-2105-6-s2-s11","title":"Microarray scanner calibration curves: characteristics and implications","display_name":"Microarray scanner calibration curves: characteristics and implications","publication_year":2005,"publication_date":"2005-07-01","ids":{"openalex":"https://openalex.org/W2144120272","doi":"https://doi.org/10.1186/1471-2105-6-s2-s11","mag":"2144120272","pmid":"https://pubmed.ncbi.nlm.nih.gov/16026596"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-6-s2-s11","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-6-s2-s11","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S2-S11","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S2-S11","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5102979537","display_name":"Leming Shi","orcid":"https://orcid.org/0000-0002-7143-2033"},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Leming Shi","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas 72079, USA. leming.shi@fda.hhs.gov","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas 72079, USA. leming.shi@fda.hhs.gov","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068886380","display_name":"Weida Tong","orcid":"https://orcid.org/0000-0003-3488-6148"},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Weida Tong","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110507775","display_name":"Zhenqiang Su","orcid":null},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhenqiang Su","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001024551","display_name":"Tao Han","orcid":"https://orcid.org/0000-0003-3463-3319"},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tao Han","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101535588","display_name":"Jing Han","orcid":"https://orcid.org/0000-0002-8657-4851"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jing Han","raw_affiliation_strings":["Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, NIH Campus Building 29B, 29 Lincoln Drive, Bethesda, Maryland, 20892, USA","Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, Bethesda, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, NIH Campus Building 29B, 29 Lincoln Drive, Bethesda, Maryland, 20892, USA","institution_ids":["https://openalex.org/I1318287680","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, Bethesda, USA","institution_ids":["https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067972591","display_name":"Raj K. Puri","orcid":"https://orcid.org/0000-0003-2548-346X"},"institutions":[{"id":"https://openalex.org/I1318287680","display_name":"Center for Biologics Evaluation and Research","ror":"https://ror.org/02nr3fr97","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1318287680","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Raj K Puri","raw_affiliation_strings":["Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, NIH Campus Building 29B, 29 Lincoln Drive, Bethesda, Maryland, 20892, USA","Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, Bethesda, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, NIH Campus Building 29B, 29 Lincoln Drive, Bethesda, Maryland, 20892, USA","institution_ids":["https://openalex.org/I1318287680","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"Center for Biologics Evaluation and Research, U.S. Food and Drug Administration, Bethesda, USA","institution_ids":["https://openalex.org/I1318287680","https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103228349","display_name":"Hong Fang","orcid":"https://orcid.org/0000-0002-2330-1469"},"institutions":[{"id":"https://openalex.org/I4210147108","display_name":"Hi-Z Technology (United States)","ror":"https://ror.org/03x8f0b85","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147108"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hong Fang","raw_affiliation_strings":["Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","Z-Tech Corporation, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I4210147108"]},{"raw_affiliation_string":"Z-Tech Corporation, Jefferson, USA","institution_ids":["https://openalex.org/I4210147108"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056523134","display_name":"Felix W. Frueh","orcid":"https://orcid.org/0000-0003-0995-8939"},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1333606569","display_name":"Center for Drug Evaluation and Research","ror":"https://ror.org/00yf3tm42","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Felix W Frueh","raw_affiliation_strings":["Center for Drug Evaluation and Research, U.S. Food and Drug Administration, 1451 Rockville Pike, Rockville, Maryland, 20852, USA","Center for Drug Evaluation and Research, U.S. Food and Drug Administration, Rockville, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Drug Evaluation and Research, U.S. Food and Drug Administration, 1451 Rockville Pike, Rockville, Maryland, 20852, USA","institution_ids":["https://openalex.org/I1320320070","https://openalex.org/I1333606569"]},{"raw_affiliation_string":"Center for Drug Evaluation and Research, U.S. Food and Drug Administration, Rockville, USA","institution_ids":["https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076838888","display_name":"Federico Goodsaid","orcid":"https://orcid.org/0009-0000-8824-9502"},"institutions":[{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1333606569","display_name":"Center for Drug Evaluation and Research","ror":"https://ror.org/00yf3tm42","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Federico M Goodsaid","raw_affiliation_strings":["Center for Drug Evaluation and Research, U.S. Food and Drug Administration, 1451 Rockville Pike, Rockville, Maryland, 20852, USA","Center for Drug Evaluation and Research, U.S. Food and Drug Administration, Rockville, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Drug Evaluation and Research, U.S. Food and Drug Administration, 1451 Rockville Pike, Rockville, Maryland, 20852, USA","institution_ids":["https://openalex.org/I1320320070","https://openalex.org/I1333606569"]},{"raw_affiliation_string":"Center for Drug Evaluation and Research, U.S. Food and Drug Administration, Rockville, USA","institution_ids":["https://openalex.org/I1320320070","https://openalex.org/I1333606569"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079261300","display_name":"Lei Guo","orcid":"https://orcid.org/0000-0002-0402-4152"},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lei Guo","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072153166","display_name":"William S. Branham","orcid":null},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William S Branham","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051461953","display_name":"James J. Chen","orcid":"https://orcid.org/0000-0001-6967-6349"},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James J Chen","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111954762","display_name":"Z. Alex Xu","orcid":null},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Z Alex Xu","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102982187","display_name":"Stephen Harris","orcid":"https://orcid.org/0009-0006-8660-5597"},"institutions":[{"id":"https://openalex.org/I4210147108","display_name":"Hi-Z Technology (United States)","ror":"https://ror.org/03x8f0b85","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147108"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen C Harris","raw_affiliation_strings":["Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","Z-Tech Corporation, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I4210147108"]},{"raw_affiliation_string":"Z-Tech Corporation, Jefferson, USA","institution_ids":["https://openalex.org/I4210147108"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100742819","display_name":"Huixiao Hong","orcid":"https://orcid.org/0000-0001-8087-3968"},"institutions":[{"id":"https://openalex.org/I4210147108","display_name":"Hi-Z Technology (United States)","ror":"https://ror.org/03x8f0b85","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147108"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Huixiao Hong","raw_affiliation_strings":["Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","Z-Tech Corporation, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I4210147108"]},{"raw_affiliation_string":"Z-Tech Corporation, Jefferson, USA","institution_ids":["https://openalex.org/I4210147108"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010087179","display_name":"Qian Xie","orcid":"https://orcid.org/0000-0002-3755-8599"},"institutions":[{"id":"https://openalex.org/I4210147108","display_name":"Hi-Z Technology (United States)","ror":"https://ror.org/03x8f0b85","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147108"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qian Xie","raw_affiliation_strings":["Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","Z-Tech Corporation, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I4210147108"]},{"raw_affiliation_string":"Z-Tech Corporation, Jefferson, USA","institution_ids":["https://openalex.org/I4210147108"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048655816","display_name":"Roger Perkins","orcid":null},"institutions":[{"id":"https://openalex.org/I4210147108","display_name":"Hi-Z Technology (United States)","ror":"https://ror.org/03x8f0b85","country_code":"US","type":"company","lineage":["https://openalex.org/I4210147108"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Roger G Perkins","raw_affiliation_strings":["Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","Z-Tech Corporation, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Z-Tech Corporation, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I4210147108"]},{"raw_affiliation_string":"Z-Tech Corporation, Jefferson, USA","institution_ids":["https://openalex.org/I4210147108"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018882292","display_name":"James C. Fuscoe","orcid":null},"institutions":[{"id":"https://openalex.org/I1304557061","display_name":"National Center for Toxicological Research","ror":"https://ror.org/05jmhh281","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"id":"https://openalex.org/I1320320070","display_name":"United States Food and Drug Administration","ror":"https://ror.org/034xvzb47","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1320320070"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James C Fuscoe","raw_affiliation_strings":["National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food and Drug Administration, 3900 NCTR Road, Jefferson, Arkansas, 72079, USA","institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"]},{"raw_affiliation_string":"National Center for Toxicological Research, U.S. Food & Drug Administration, Jefferson, USA","institution_ids":["https://openalex.org/I1320320070"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5102979537"],"corresponding_institution_ids":["https://openalex.org/I1304557061","https://openalex.org/I1320320070"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":6.4068,"has_fulltext":true,"cited_by_count":124,"citation_normalized_percentile":{"value":0.97636925,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"6","issue":"S2","first_page":"S11","last_page":"S11"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.8378999829292297,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.8378999829292297,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.07259999960660934,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.026499999687075615,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/reproducibility","display_name":"Reproducibility","score":0.7600109577178955},{"id":"https://openalex.org/keywords/calibration-curve","display_name":"Calibration curve","score":0.7479343414306641},{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.7040814161300659},{"id":"https://openalex.org/keywords/linearity","display_name":"Linearity","score":0.6353837251663208},{"id":"https://openalex.org/keywords/calibration","display_name":"Calibration","score":0.6166366934776306},{"id":"https://openalex.org/keywords/curve-fitting","display_name":"Curve fitting","score":0.41210728883743286},{"id":"https://openalex.org/keywords/analytical-chemistry","display_name":"Analytical Chemistry (journal)","score":0.4011930823326111},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.343830406665802},{"id":"https://openalex.org/keywords/materials-science","display_name":"Materials science","score":0.33714962005615234},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3270421326160431},{"id":"https://openalex.org/keywords/optics","display_name":"Optics","score":0.3244500756263733},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.255160391330719},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.23784244060516357},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.23171678185462952},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16956806182861328},{"id":"https://openalex.org/keywords/detection-limit","display_name":"Detection limit","score":0.1342352330684662},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.11922222375869751}],"concepts":[{"id":"https://openalex.org/C9893847","wikidata":"https://www.wikidata.org/wiki/Q1425625","display_name":"Reproducibility","level":2,"score":0.7600109577178955},{"id":"https://openalex.org/C23531484","wikidata":"https://www.wikidata.org/wiki/Q3196863","display_name":"Calibration curve","level":3,"score":0.7479343414306641},{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.7040814161300659},{"id":"https://openalex.org/C77170095","wikidata":"https://www.wikidata.org/wiki/Q1753188","display_name":"Linearity","level":2,"score":0.6353837251663208},{"id":"https://openalex.org/C165838908","wikidata":"https://www.wikidata.org/wiki/Q736777","display_name":"Calibration","level":2,"score":0.6166366934776306},{"id":"https://openalex.org/C184389593","wikidata":"https://www.wikidata.org/wiki/Q603159","display_name":"Curve fitting","level":2,"score":0.41210728883743286},{"id":"https://openalex.org/C113196181","wikidata":"https://www.wikidata.org/wiki/Q485223","display_name":"Analytical Chemistry (journal)","level":2,"score":0.4011930823326111},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.343830406665802},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.33714962005615234},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3270421326160431},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.3244500756263733},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.255160391330719},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.23784244060516357},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.23171678185462952},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16956806182861328},{"id":"https://openalex.org/C119128265","wikidata":"https://www.wikidata.org/wiki/Q900165","display_name":"Detection limit","level":2,"score":0.1342352330684662},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.11922222375869751},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002138","descriptor_name":"Calibration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002138","descriptor_name":"Calibration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002138","descriptor_name":"Calibration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D040081","descriptor_name":"Protein Array Analysis","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-6-s2-s11","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-6-s2-s11","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S2-S11","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:16026596","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16026596","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:9e0429f61be84f2c910d8910180dec34","is_oa":true,"landing_page_url":"https://doaj.org/article/9e0429f61be84f2c910d8910180dec34","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 6, Iss Suppl 2, p S11 (2005)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:367594","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1637029","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1637029","is_oa":true,"landing_page_url":"http://doi.org/10.1186/1471-2105-6-S2-S11","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-6-s2-s11","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-6-s2-s11","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-6-S2-S11","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2144120272.pdf","grobid_xml":"https://content.openalex.org/works/W2144120272.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1557844666","https://openalex.org/W1967668617","https://openalex.org/W1983891087","https://openalex.org/W1983911102","https://openalex.org/W2008863883","https://openalex.org/W2015341941","https://openalex.org/W2021670746","https://openalex.org/W2043789476","https://openalex.org/W2059550141","https://openalex.org/W2098453858","https://openalex.org/W2100668965","https://openalex.org/W2103164463","https://openalex.org/W2104143846","https://openalex.org/W2116449269","https://openalex.org/W2120423769","https://openalex.org/W2127299993","https://openalex.org/W2133111499","https://openalex.org/W2145576538","https://openalex.org/W2147955536","https://openalex.org/W2153006842","https://openalex.org/W2158306079","https://openalex.org/W2160456513","https://openalex.org/W2164155888","https://openalex.org/W2164550342","https://openalex.org/W2167395325","https://openalex.org/W4230395858"],"related_works":["https://openalex.org/W2413717610","https://openalex.org/W1973270181","https://openalex.org/W2417696084","https://openalex.org/W2368782778","https://openalex.org/W2087830269","https://openalex.org/W3106281778","https://openalex.org/W2003643616","https://openalex.org/W2973642506","https://openalex.org/W2370987858","https://openalex.org/W1994333228"],"abstract_inverted_index":{"BACKGROUND:":[0],"Microarray-based":[1],"measurement":[2],"of":[3,38,55,85,87,129,137,157,161,166,182,195,240],"mRNA":[4,139],"abundance":[5,140],"assumes":[6],"a":[7,30],"linear":[8],"relationship":[9],"between":[10,229],"the":[11,15,21,50,60,64,68,76,83,88,93,97,108,112,116,124,133,142,155,180,185,203,227],"fluorescence":[12],"intensity":[13,80,114,232],"and":[14,57,78,102,135,141,164,231],"dye":[16,66],"concentration.":[17],"In":[18],"reality,":[19],"however,":[20],"calibration":[22,33,53,61,89,204],"curve":[23,62,90],"can":[24],"be":[25],"nonlinear.":[26],"RESULTS:":[27],"By":[28],"scanning":[29],"microarray":[31,218,241],"scanner":[32],"slide":[34],"containing":[35],"known":[36],"concentrations":[37,200],"fluorescent":[39],"dyes":[40],"under":[41,67,107,225],"18":[42],"PMT":[43,70,94],"gains,":[44],"we":[45,151],"were":[46],"able":[47],"to":[48,154,216],"evaluate":[49],"differences":[51],"in":[52,168,247],"characteristics":[54,131],"Cy5":[56,101,125],"Cy3.":[58],"First,":[59],"for":[63,115,123,208],"same":[65,69,109],"gain":[71,223],"is":[72,119,214,233],"nonlinear":[73],"at":[74,220],"both":[75],"high":[77],"low":[79],"ends.":[81],"Second,":[82],"degree":[84],"nonlinearity":[86],"depends":[91],"on":[92,132,199],"gain.":[95,110],"Third,":[96],"two":[98],"PMTs":[99],"(for":[100],"Cy3)":[103],"behave":[104],"differently":[105],"even":[106],"Fourth,":[111],"background":[113],"Cy3":[117],"channel":[118],"higher":[120],"than":[121],"that":[122,174],"channel.":[126],"The":[127],"impact":[128],"such":[130],"accuracy":[134],"reproducibility":[136,239],"measured":[138],"calculated":[143],"ratios":[144,167,190,197],"was":[145,206],"demonstrated.":[146],"Combined":[147],"with":[148],"simulation":[149],"results,":[150],"provided":[152],"explanations":[153],"existence":[156],"ratio":[158,162,183,210],"underestimation,":[159],"intensity-dependence":[160,181],"bias,":[163,184],"anti-correlation":[165],"dye-swap":[169],"replicates.":[170],"We":[171],"further":[172],"demonstrated":[173],"although":[175],"Lowess":[176],"normalization":[177,236],"effectively":[178],"eliminates":[179],"systematic":[186],"deviation":[187],"from":[188,202],"true":[189],"largely":[191],"remained.":[192],"A":[193],"method":[194],"calculating":[196],"based":[198],"estimated":[201],"curves":[205],"proposed":[207],"correcting":[209],"bias.":[211],"CONCLUSION:":[212],"It":[213],"preferable":[215],"scan":[217],"slides":[219],"fixed,":[221],"optimal":[222],"settings":[224],"which":[226],"linearity":[228],"concentration":[230],"maximized.":[234],"Although":[235],"methods":[237],"improve":[238],"measurements,":[242],"they":[243],"appear":[244],"less":[245],"effective":[246],"improving":[248],"accuracy.":[249]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":11},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":6}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
