{"id":"https://openalex.org/W1839478649","doi":"https://doi.org/10.1186/1471-2105-5-46","title":"B.E.A.R. GeneInfo: A tool for identifying gene-related biomedical publications through user modifiable queries","display_name":"B.E.A.R. GeneInfo: A tool for identifying gene-related biomedical publications through user modifiable queries","publication_year":2004,"publication_date":"2004-04-29","ids":{"openalex":"https://openalex.org/W1839478649","doi":"https://doi.org/10.1186/1471-2105-5-46","mag":"1839478649","pmid":"https://pubmed.ncbi.nlm.nih.gov/15117422"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-5-46","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-5-46","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-5-46","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-5-46","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Guohui Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Guohui Zhou","raw_affiliation_strings":["Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. guohui@rocketmail.com","Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, USA. guohui@rocketmail.com","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007178705","display_name":"Xinyu Wen","orcid":"https://orcid.org/0000-0001-8233-5418"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xinyu Wen","raw_affiliation_strings":["Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100339046","display_name":"Hang Liu","orcid":"https://orcid.org/0000-0003-3012-6061"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hang Liu","raw_affiliation_strings":["Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005416827","display_name":"Michael J. Schlicht","orcid":null},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael J Schlicht","raw_affiliation_strings":["Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034542132","display_name":"Martin J. Hessner","orcid":"https://orcid.org/0000-0001-9941-0314"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin J Hessner","raw_affiliation_strings":["Department of Pediatrics and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","Department of Pediatrics and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pediatrics and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Pediatrics and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028127888","display_name":"Peter J. Tonellato","orcid":"https://orcid.org/0000-0003-0658-1734"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter J Tonellato","raw_affiliation_strings":["Department of Physiology and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","Department of Physiology and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physiology and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Physiology and Human and Molecular Genetics Center, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5080342341","display_name":"Milton W. Datta","orcid":null},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Milton W Datta","raw_affiliation_strings":["Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, WI, 53226, U.S.A","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Department of Pathology and Bioinformatics Program, Medical College of Wisconsin, Milwaukee, U.S.A","institution_ids":["https://openalex.org/I204308271"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5080342341"],"corresponding_institution_ids":["https://openalex.org/I204308271"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.7235,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.66611257,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"5","issue":"1","first_page":"46","last_page":"46"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4846000075340271,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.4846000075340271,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.1981000006198883,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.01810000091791153,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6304620504379272},{"id":"https://openalex.org/keywords/gene-nomenclature","display_name":"Gene nomenclature","score":0.6148130297660828},{"id":"https://openalex.org/keywords/unigene","display_name":"UniGene","score":0.5955605506896973},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.5261960625648499},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.5058853030204773},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.49052995443344116},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.44745156168937683},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4452635645866394},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4329044222831726},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3528544008731842},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.32717016339302063},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.255612313747406},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2333855926990509},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.20063340663909912},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19801026582717896},{"id":"https://openalex.org/keywords/expressed-sequence-tag","display_name":"Expressed sequence tag","score":0.17587658762931824}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6304620504379272},{"id":"https://openalex.org/C62177273","wikidata":"https://www.wikidata.org/wiki/Q5531556","display_name":"Gene nomenclature","level":4,"score":0.6148130297660828},{"id":"https://openalex.org/C2780330800","wikidata":"https://www.wikidata.org/wiki/Q7884647","display_name":"UniGene","level":5,"score":0.5955605506896973},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.5261960625648499},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.5058853030204773},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.49052995443344116},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.44745156168937683},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4452635645866394},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4329044222831726},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3528544008731842},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.32717016339302063},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.255612313747406},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2333855926990509},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.20063340663909912},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19801026582717896},{"id":"https://openalex.org/C149034497","wikidata":"https://www.wikidata.org/wiki/Q1384835","display_name":"Expressed sequence tag","level":4,"score":0.17587658762931824},{"id":"https://openalex.org/C514705636","wikidata":"https://www.wikidata.org/wiki/Q863247","display_name":"Nomenclature","level":3,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000188","qualifier_name":"drug therapy","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011471","descriptor_name":"Prostatic Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012643","descriptor_name":"Selenium","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D012643","descriptor_name":"Selenium","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D012643","descriptor_name":"Selenium","qualifier_ui":"Q000627","qualifier_name":"therapeutic use","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012985","descriptor_name":"Software Design","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-5-46","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-5-46","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-5-46","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:15117422","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/15117422","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:6a7cde5da7ad46b28b1a79c791f62a45","is_oa":true,"landing_page_url":"https://doaj.org/article/6a7cde5da7ad46b28b1a79c791f62a45","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 5, Iss 1, p 46 (2004)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:419696","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/419696","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-5-46","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-5-46","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-5-46","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4266258533","display_name":null,"funder_award_id":"R21 CA098032","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G4787364492","display_name":null,"funder_award_id":"R21CA098032","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G4882042709","display_name":null,"funder_award_id":"R01 HL064541","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"}],"funders":[{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1839478649.pdf","grobid_xml":"https://content.openalex.org/works/W1839478649.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W163833468","https://openalex.org/W1543602354","https://openalex.org/W1548263480","https://openalex.org/W1579871556","https://openalex.org/W1661470104","https://openalex.org/W1829312150","https://openalex.org/W1914602388","https://openalex.org/W1998902445","https://openalex.org/W2014164382","https://openalex.org/W2021239799","https://openalex.org/W2021410510","https://openalex.org/W2040898516","https://openalex.org/W2053852189","https://openalex.org/W2087840051","https://openalex.org/W2095641063","https://openalex.org/W2099373309","https://openalex.org/W2112236650","https://openalex.org/W2131989143","https://openalex.org/W2138814935","https://openalex.org/W2139084975","https://openalex.org/W2140947675","https://openalex.org/W2148115950","https://openalex.org/W2159203162","https://openalex.org/W2166438326","https://openalex.org/W4240689716"],"related_works":["https://openalex.org/W2027712757","https://openalex.org/W2123211219","https://openalex.org/W2990171052","https://openalex.org/W3028206028","https://openalex.org/W2160073543","https://openalex.org/W4386774076","https://openalex.org/W2152960199","https://openalex.org/W2146014453","https://openalex.org/W2116418175","https://openalex.org/W2182099107"],"abstract_inverted_index":{"BACKGROUND:":[0],"Once":[1],"specific":[2,134,280],"genes":[3,33,57,96,249,276],"are":[4,78],"identified":[5,95,210,253],"through":[6,254],"high":[7],"throughput":[8],"genomics":[9],"technologies":[10],"there":[11],"is":[12,133,235,287],"a":[13,22,84,110,144,148,197,246],"need":[14],"to":[15,21,43,135,146,179,190,243,275],"sort":[16],"the":[17,37,56,88,92,120,124,136,168,174,191,203,209,219,225,260,269,273,291,296],"final":[18],"gene":[19,44,159,170,177],"list":[20,93,198,247,274],"manageable":[23],"size":[24],"for":[25,74,86,129,207,212],"validation":[26],"studies.":[27,258],"The":[28,182,193,285],"triaging":[29],"and":[30,48,139,166,172,214,295,301],"sorting":[31],"of":[32,39,94,123,150,176,199,218,221,227,248,262],"often":[34],"relies":[35],"on":[36,119,290],"use":[38,220,261],"supplemental":[40],"information":[41],"related":[42],"structure,":[45],"metabolic":[46,66],"pathways,":[47,67],"chromosomal":[49,70],"location.":[50],"Yet":[51],"in":[52,224],"disease":[53],"states":[54],"where":[55],"may":[58],"not":[59],"have":[60,108,251],"identifiable":[61],"structural":[62],"elements,":[63],"poorly":[64],"defined":[65],"or":[68,158,256,283],"limited":[69],"data,":[71],"flexible":[72,116],"systems":[73],"obtaining":[75],"additional":[76,100,186,266],"data":[77,130],"necessary.":[79],"In":[80],"these":[81,164],"situations":[82],"having":[83],"tool":[85,142,223,239,286],"searching":[87],"biomedical":[89],"literature":[90],"using":[91],"while":[97],"simultaneously":[98],"defining":[99],"search":[101,188,267],"terms":[102,189,268],"would":[103],"be":[104,241],"useful.":[105],"RESULTS:":[106],"We":[107],"built":[109],"tool,":[111],"BEAR":[112,161],"GeneInfo,":[113],"that":[114,132,250,277],"allows":[115,143],"searches":[117,264],"based":[118],"investigators":[121],"knowledge":[122],"biological":[125],"process,":[126],"thus":[127],"allowing":[128],"mining":[131],"scientist's":[137],"strengths":[138],"interests.":[140],"This":[141,238],"user":[145],"upload":[147],"series":[149],"GenBank":[151],"accession":[152],"numbers,":[153],"Unigene":[154],"Ids,":[155,157],"Locuslink":[156],"names.":[160],"GeneInfo":[162],"takes":[163],"IDs":[165],"identifies":[167],"associated":[169,204],"names,":[171],"uses":[173],"lists":[175],"names":[178],"query":[180],"PubMed.":[181],"investigator":[183,270],"can":[184,240,271],"add":[185],"modifying":[187],"query.":[192],"subsequent":[194],"output":[195],"provides":[196],"publications,":[200],"along":[201],"with":[202,233,265],"reference":[205],"hyperlinks,":[206],"reviewing":[208],"articles":[211],"relevance":[213],"interest.":[215],"An":[216],"example":[217],"this":[222],"study":[226],"human":[228],"prostate":[229],"cancer":[230],"cells":[231],"treated":[232],"Selenium":[234],"presented.":[236],"CONCLUSIONS:":[237],"used":[242],"further":[244],"define":[245],"been":[252],"genomic":[255],"genetic":[257],"Through":[259],"targeted":[263],"limit":[272],"match":[278],"their":[279],"research":[281],"interests":[282],"needs.":[284],"freely":[288],"available":[289],"web":[292],"at":[293],"http://prostategenomics.org1,":[294],"authors":[297],"will":[298],"provide":[299],"scripts":[300],"database":[302],"components":[303],"if":[304],"requested":[305],"mdatta@mcw.edu":[306]},"counts_by_year":[],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2025-10-10T00:00:00"}
