{"id":"https://openalex.org/W1820803539","doi":"https://doi.org/10.1186/1471-2105-16-s12-s3","title":"Protein complex detection in PPI networks based on data integration and supervised learning method","display_name":"Protein complex detection in PPI networks based on data integration and supervised learning method","publication_year":2015,"publication_date":"2015-08-25","ids":{"openalex":"https://openalex.org/W1820803539","doi":"https://doi.org/10.1186/1471-2105-16-s12-s3","mag":"1820803539","pmid":"https://pubmed.ncbi.nlm.nih.gov/26329886"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-16-s12-s3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-16-s12-s3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S12-S3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S12-S3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5016815561","display_name":"Feng Yu","orcid":"https://orcid.org/0000-0002-6417-5884"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Feng Ying Yu","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, DaLian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, DaLian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055392628","display_name":"Zhi Yang","orcid":"https://orcid.org/0000-0001-8905-3392"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Zhi Hao Yang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, DaLian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, DaLian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103372432","display_name":"Xiao Hua Hu","orcid":null},"institutions":[{"id":"https://openalex.org/I72816309","display_name":"Drexel University","ror":"https://ror.org/04bdffz58","country_code":"US","type":"education","lineage":["https://openalex.org/I72816309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Xiao Hua Hu","raw_affiliation_strings":["College of Computing &Informatics, Drexel University, Philadelphia, PA, 19104, USA","College of Computing &Informatics, Drexel University, Philadelphia, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computing &Informatics, Drexel University, Philadelphia, PA, 19104, USA","institution_ids":["https://openalex.org/I72816309"]},{"raw_affiliation_string":"College of Computing &Informatics, Drexel University, Philadelphia, USA","institution_ids":["https://openalex.org/I72816309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048746096","display_name":"Yuan Sun","orcid":"https://orcid.org/0000-0003-2911-0070"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan Yuan Sun","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, DaLian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, DaLian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066502769","display_name":"Hong Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hong Fei Lin","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, DaLian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, DaLian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100696824","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0002-4316-932X"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, China","College of Computer Science and Technology, DaLian University of Technology, Dalian, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]},{"raw_affiliation_string":"College of Computer Science and Technology, DaLian University of Technology, Dalian, China","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5055392628"],"corresponding_institution_ids":["https://openalex.org/I27357992"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.1018,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.76092266,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"16","issue":"S12","first_page":"S3","last_page":"S3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9708999991416931,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9708999991416931,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.013299999758601189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.002199999988079071,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5924642086029053},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5601201057434082},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4872802495956421},{"id":"https://openalex.org/keywords/limit","display_name":"Limit (mathematics)","score":0.4686153531074524},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.46309804916381836},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.45447832345962524},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.43724849820137024},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4322625696659088},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.42758530378341675},{"id":"https://openalex.org/keywords/matching","display_name":"Matching (statistics)","score":0.4268420338630676},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4229544997215271},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.3472612202167511},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19130155444145203},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1580810546875},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.11503392457962036},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.08742460608482361}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5924642086029053},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5601201057434082},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4872802495956421},{"id":"https://openalex.org/C151201525","wikidata":"https://www.wikidata.org/wiki/Q177239","display_name":"Limit (mathematics)","level":2,"score":0.4686153531074524},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.46309804916381836},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.45447832345962524},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.43724849820137024},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4322625696659088},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.42758530378341675},{"id":"https://openalex.org/C165064840","wikidata":"https://www.wikidata.org/wiki/Q1321061","display_name":"Matching (statistics)","level":2,"score":0.4268420338630676},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4229544997215271},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.3472612202167511},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19130155444145203},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1580810546875},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.11503392457962036},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.08742460608482361},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000069553","descriptor_name":"Supervised Machine Learning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-16-s12-s3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-16-s12-s3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S12-S3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26329886","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26329886","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4705505","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4705505","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-16-s12-s3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-16-s12-s3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S12-S3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2320491387","display_name":null,"funder_award_id":"NCET-13-0084","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2505898708","display_name":null,"funder_award_id":"61070098","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G2591554445","display_name":null,"funder_award_id":"61340020","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G2895212994","display_name":null,"funder_award_id":"NCET-13","funder_id":"https://openalex.org/F4320334924","funder_display_name":"Program for New Century Excellent Talents in University"},{"id":"https://openalex.org/G3061476762","display_name":null,"funder_award_id":"61070098","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3180814013","display_name":null,"funder_award_id":"DUT13JB09","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G3250738741","display_name":null,"funder_award_id":"DUT14YQ213","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G327815063","display_name":null,"funder_award_id":"61340020","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G442701522","display_name":null,"funder_award_id":"DUT14YQ213","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4988359416","display_name":null,"funder_award_id":"DUT13JB09","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5608981898","display_name":null,"funder_award_id":"61070098","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G5683716505","display_name":null,"funder_award_id":"61340020","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G5737247194","display_name":null,"funder_award_id":"DUT13JB09","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G710307346","display_name":null,"funder_award_id":"NCET-13-0084","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G7117473931","display_name":null,"funder_award_id":"DUT14YQ213","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G72686002","display_name":null,"funder_award_id":"NCET-13-0084","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G7459829649","display_name":null,"funder_award_id":"61272373","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G8108786737","display_name":"\u57fa\u4e8e\u751f\u7269\u533b\u5b66\u6587\u732e\u7684\u9690\u542b\u77e5\u8bc6\u53d1\u73b0\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61272373","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8388280645","display_name":null,"funder_award_id":"NCET-13-","funder_id":"https://openalex.org/F4320334924","funder_display_name":"Program for New Century Excellent Talents in University"},{"id":"https://openalex.org/G877393814","display_name":null,"funder_award_id":"NCET-13","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8920186992","display_name":null,"funder_award_id":"61272373","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321106","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934"},{"id":"https://openalex.org/F4320334924","display_name":"Program for New Century Excellent Talents in University","ror":"https://ror.org/01mv9t934"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1820803539.pdf","grobid_xml":"https://content.openalex.org/works/W1820803539.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1783384641","https://openalex.org/W1986214964","https://openalex.org/W2020314029","https://openalex.org/W2021025020","https://openalex.org/W2050721857","https://openalex.org/W2069074200","https://openalex.org/W2076640061","https://openalex.org/W2082565035","https://openalex.org/W2100371004","https://openalex.org/W2101181377","https://openalex.org/W2103017472","https://openalex.org/W2116117181","https://openalex.org/W2117720828","https://openalex.org/W2122964432","https://openalex.org/W2124166542","https://openalex.org/W2124354935","https://openalex.org/W2132582966","https://openalex.org/W2136850043","https://openalex.org/W2140280811","https://openalex.org/W2158246396","https://openalex.org/W2165533101","https://openalex.org/W2168708357"],"related_works":["https://openalex.org/W3183633970","https://openalex.org/W2900794075","https://openalex.org/W3208309985","https://openalex.org/W2102298087","https://openalex.org/W2113360617","https://openalex.org/W4206811943","https://openalex.org/W2089099363","https://openalex.org/W1578069856","https://openalex.org/W4200494388","https://openalex.org/W1987231763"],"abstract_inverted_index":{"BACKGROUND:":[0],"Revealing":[1],"protein":[2,23,31,48,100,120,267],"complexes":[3,32,268],"are":[4,56,82,171,197,229],"important":[5],"for":[6],"understanding":[7],"principles":[8],"of":[9,22,42,92,109,112,131,142,155,184,218,240,248],"cellular":[10],"organization":[11],"and":[12,65,73,89,158,166,187,195,220,227,260],"function.":[13],"High-throughput":[14],"experimental":[15,129,234],"techniques":[16],"have":[17,242],"produced":[18],"a":[19,243],"large":[20,64,244],"amount":[21,41],"interactions,":[24],"which":[25,104],"makes":[26],"it":[27],"possible":[28],"to":[29,118],"predict":[30],"from":[33,70,253],"protein-protein":[34],"interaction":[35],"(PPI)":[36],"networks.":[37,126,263],"However,":[38],"the":[39,63,75,93,97,110,123,143,147,151,163,176,180,192,203,210,215,225,238],"small":[40],"known":[43,114],"physical":[44],"interactions":[45],"may":[46],"limit":[47],"complex":[49,101,121,206],"detection.":[50],"METHODS:":[51],"The":[52,128,233],"new":[53,124,249],"PPI":[54,60,68,78,125,138,149,178,213,251,258,262],"networks":[55,139,259],"constructed":[57],"by":[58],"integrating":[59],"datasets":[61],"with":[62,146,175,201],"readily":[66],"available":[67,113],"data":[69,252],"biomedical":[71,254],"literature,":[72],"then":[74],"less":[76],"reliable":[77],"between":[79],"two":[80,94,134],"proteins":[81],"filtered":[83],"out":[84],"based":[85],"on":[86,122,133,209],"semantic":[87],"similarity":[88,91],"topological":[90],"proteins.":[95],"Finally,":[96],"supervised":[98],"learning":[99],"detection":[102,207,269],"(SLPC),":[103],"can":[105,271],"make":[106],"full":[107],"use":[108],"information":[111],"complexes,":[115],"is":[116],"applied":[117],"detect":[119],"RESULTS:":[127],"results":[130,235],"SLPC":[132,241],"different":[135],"categories":[136],"yeast":[137],"demonstrate":[140],"effectiveness":[141],"approach:":[144],"compared":[145,174,200],"original":[148,257],"networks,":[150,179,214],"best":[152,181],"average":[153,182,216],"improvements":[154,183,217],"4.76,":[156],"6.81":[157],"15.75":[159],"percentage":[160,189,222],"units":[161,190,223],"in":[162,191,224],"F-score,":[164,193],"accuracy":[165,194],"maximum":[167],"matching":[168],"ratio":[169],"(MMR)":[170],"achieved":[172,198,230],"respectively;":[173,199],"denoising":[177,211,261],"3.91,":[185],"4.61":[186],"12.10":[188],"MMR":[196,228],"ClusterONE,":[202],"start-of":[204],"the-art":[205],"method,":[208],"extended":[212],"26.02":[219],"22.40":[221],"F-score":[226],"respectively.":[231],"CONCLUSIONS:":[232],"show":[236],"that":[237],"performances":[239],"improvement":[245],"through":[246],"integration":[247],"receivable":[250],"literature":[255],"into":[256],"In":[264],"addition,":[265],"our":[266],"method":[270],"achieve":[272],"better":[273],"performance":[274],"than":[275],"ClusterONE.":[276]},"counts_by_year":[{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
