{"id":"https://openalex.org/W1919684990","doi":"https://doi.org/10.1186/1471-2105-16-s10-s6","title":"The contribution of co-reference resolution to supervised relation detection between bacteria and biotopes entities","display_name":"The contribution of co-reference resolution to supervised relation detection between bacteria and biotopes entities","publication_year":2015,"publication_date":"2015-06-23","ids":{"openalex":"https://openalex.org/W1919684990","doi":"https://doi.org/10.1186/1471-2105-16-s10-s6","mag":"1919684990","pmid":"https://pubmed.ncbi.nlm.nih.gov/26201352"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-16-s10-s6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-16-s10-s6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S10-S6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S10-S6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100774746","display_name":"Thomas Lavergne","orcid":"https://orcid.org/0000-0002-9498-4551"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I102197404","display_name":"Universit\u00e9 Paris-Sud","ror":"https://ror.org/028rypz17","country_code":"FR","type":"education","lineage":["https://openalex.org/I102197404"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Thomas Lavergne","raw_affiliation_strings":["LIMSI-CNRS, 91405, Orsay, France","Universit\u00e9 Paris-Sud, 91405, Orsay, France","Universit\u00e9 Paris Sud, Orsay, France","LIMSI\u2013CNRS, Orsay, France"],"affiliations":[{"raw_affiliation_string":"LIMSI-CNRS, 91405, Orsay, France","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"Universit\u00e9 Paris-Sud, 91405, Orsay, France","institution_ids":["https://openalex.org/I102197404"]},{"raw_affiliation_string":"Universit\u00e9 Paris Sud, Orsay, France","institution_ids":["https://openalex.org/I102197404"]},{"raw_affiliation_string":"LIMSI\u2013CNRS, Orsay, France","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047002517","display_name":"Cyril Grouin","orcid":"https://orcid.org/0000-0001-5809-188X"},"institutions":[{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Cyril Grouin","raw_affiliation_strings":["LIMSI-CNRS, 91405, Orsay, France","LIMSI CNRS, Orsay, France"],"affiliations":[{"raw_affiliation_string":"LIMSI-CNRS, 91405, Orsay, France","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"LIMSI CNRS, Orsay, France","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090195478","display_name":"Pierre Zweigenbaum","orcid":"https://orcid.org/0000-0001-8410-4808"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210115485","display_name":"Laboratoire d'Informatique pour la M\u00e9canique et les Sciences de l'Ing\u00e9nieur","ror":"https://ror.org/01raq4x89","country_code":"FR","type":"facility","lineage":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485","https://openalex.org/I4210159245"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Pierre Zweigenbaum","raw_affiliation_strings":["LIMSI-CNRS, 91405, Orsay, France","LIMSI CNRS, Orsay, France"],"affiliations":[{"raw_affiliation_string":"LIMSI-CNRS, 91405, Orsay, France","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"LIMSI CNRS, Orsay, France","institution_ids":["https://openalex.org/I4210115485","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100774746"],"corresponding_institution_ids":["https://openalex.org/I102197404","https://openalex.org/I1294671590","https://openalex.org/I4210115485"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.9581,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.85883829,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"16","issue":"S10","first_page":"S6","last_page":"S6"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biotope","display_name":"Biotope","score":0.702920138835907},{"id":"https://openalex.org/keywords/relation","display_name":"Relation (database)","score":0.6167219281196594},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5285543203353882},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.484636127948761},{"id":"https://openalex.org/keywords/resolution","display_name":"Resolution (logic)","score":0.47500455379486084},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.4686158299446106},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3573139011859894},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.3291320204734802},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3108457624912262},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.2727185785770416},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2649381756782532},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20529529452323914},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.19160199165344238}],"concepts":[{"id":"https://openalex.org/C112149622","wikidata":"https://www.wikidata.org/wiki/Q175208","display_name":"Biotope","level":3,"score":0.702920138835907},{"id":"https://openalex.org/C25343380","wikidata":"https://www.wikidata.org/wiki/Q277521","display_name":"Relation (database)","level":2,"score":0.6167219281196594},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5285543203353882},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.484636127948761},{"id":"https://openalex.org/C138268822","wikidata":"https://www.wikidata.org/wiki/Q1051925","display_name":"Resolution (logic)","level":2,"score":0.47500455379486084},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.4686158299446106},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3573139011859894},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.3291320204734802},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3108457624912262},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.2727185785770416},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2649381756782532},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20529529452323914},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.19160199165344238},{"id":"https://openalex.org/C185933670","wikidata":"https://www.wikidata.org/wiki/Q52105","display_name":"Habitat","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001419","descriptor_name":"Bacteria","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004783","descriptor_name":"Environmental Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004783","descriptor_name":"Environmental Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004783","descriptor_name":"Environmental Microbiology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017753","descriptor_name":"Ecosystem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-16-s10-s6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-16-s10-s6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S10-S6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26201352","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26201352","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3492661","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4511182","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-16-s10-s6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-16-s10-s6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-16-S10-S6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2675002076","display_name":"Contents and Knowledge aggregation for case-based reasoning in the field of f\u0153tal dysmorphology","funder_award_id":"ANR-12-CORD-0007","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"},{"id":"https://openalex.org/G6702880738","display_name":null,"funder_award_id":"ANR-12","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1919684990.pdf","grobid_xml":"https://content.openalex.org/works/W1919684990.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W21476260","https://openalex.org/W22087513","https://openalex.org/W76749362","https://openalex.org/W97262253","https://openalex.org/W243734986","https://openalex.org/W1495981708","https://openalex.org/W1507317106","https://openalex.org/W1585529040","https://openalex.org/W1647671624","https://openalex.org/W1672757658","https://openalex.org/W1766290689","https://openalex.org/W1914733988","https://openalex.org/W2007450471","https://openalex.org/W2016071726","https://openalex.org/W2031647041","https://openalex.org/W2044593983","https://openalex.org/W2096175520","https://openalex.org/W2098921539","https://openalex.org/W2099486982","https://openalex.org/W2106419350","https://openalex.org/W2107530479","https://openalex.org/W2110408238","https://openalex.org/W2114363816","https://openalex.org/W2116093010","https://openalex.org/W2121227244","https://openalex.org/W2124214517","https://openalex.org/W2124741472","https://openalex.org/W2135411671","https://openalex.org/W2138679451","https://openalex.org/W2142678031","https://openalex.org/W2147218300","https://openalex.org/W2147880316","https://openalex.org/W2148209062","https://openalex.org/W2150131767","https://openalex.org/W2152228269","https://openalex.org/W2158049734","https://openalex.org/W2160986985","https://openalex.org/W2163552363","https://openalex.org/W2171691447","https://openalex.org/W2179169834","https://openalex.org/W2250930171","https://openalex.org/W2251236846","https://openalex.org/W2251279337","https://openalex.org/W2489487449","https://openalex.org/W2914431807","https://openalex.org/W2916355958","https://openalex.org/W2930957955","https://openalex.org/W4211138600","https://openalex.org/W4214671568","https://openalex.org/W4229607628","https://openalex.org/W4231741839","https://openalex.org/W6735469392"],"related_works":["https://openalex.org/W2427798806","https://openalex.org/W1965419689","https://openalex.org/W311807596","https://openalex.org/W3116059436","https://openalex.org/W2383221697","https://openalex.org/W4319065316","https://openalex.org/W2317314181","https://openalex.org/W1975083272","https://openalex.org/W3008934627","https://openalex.org/W2184460272"],"abstract_inverted_index":{"We":[0,80],"show":[1],"that":[2,66],"co-reference":[3,15,93],"resolution":[4],"substantially":[5],"improves":[6],"over":[7],"a":[8,70,89,99],"baseline":[9,72],"system":[10,28,56],"which":[11,74,95],"does":[12],"not":[13],"use":[14],"information:":[16],"about":[17],"3.5":[18],"F-measure":[19,37],"points":[20,30,38],"on":[21,31,39,57,105],"the":[22,26,32,53,58,83,106],"test":[23,43],"corpus":[24],"for":[25],"end-to-end":[27],"(5.5":[29],"development":[33,41],"corpus)":[34],"and":[35,42,85],"7":[36],"both":[40],"corpora":[44],"when":[45],"gold":[46,91],"mentions":[47],"are":[48],"used.":[49],"While":[50],"this":[51],"outperforms":[52],"best":[54],"published":[55],"BioNLP-ST":[59],"2013":[60],"Bacteria":[61],"Biotope":[62],"dataset,":[63],"we":[64,96],"consider":[65],"it":[67],"provides":[68],"mostly":[69],"stronger":[71],"from":[73],"more":[75],"work":[76],"can":[77],"be":[78],"started.":[79],"also":[81],"emphasize":[82],"importance":[84],"difficulty":[86],"of":[87],"designing":[88],"comprehensive":[90],"standard":[92],"annotation,":[94],"explain":[97],"is":[98],"key":[100],"point":[101],"to":[102],"further":[103],"progress":[104],"task.":[107]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}