{"id":"https://openalex.org/W2033952228","doi":"https://doi.org/10.1186/1471-2105-15-244","title":"DBSecSys: a database of Burkholderia malleisecretion systems","display_name":"DBSecSys: a database of Burkholderia malleisecretion systems","publication_year":2014,"publication_date":"2014-07-16","ids":{"openalex":"https://openalex.org/W2033952228","doi":"https://doi.org/10.1186/1471-2105-15-244","mag":"2033952228","pmid":"https://pubmed.ncbi.nlm.nih.gov/25030112"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-15-244","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-244","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-244","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-244","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004210800","display_name":"Vesna Memi\u0161evi\u0107","orcid":null},"institutions":[{"id":"https://openalex.org/I2800986571","display_name":"Telemedicine & Advanced Technology Research Center","ror":"https://ror.org/014pvr265","country_code":"US","type":"other","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"id":"https://openalex.org/I2802581893","display_name":"United States Army Medical Research and Development Command","ror":"https://ror.org/03cd02q50","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vesna Memi\u0161evi\u0107","raw_affiliation_strings":["Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063347483","display_name":"Kamal Kumar","orcid":"https://orcid.org/0000-0002-9470-6682"},"institutions":[{"id":"https://openalex.org/I2800986571","display_name":"Telemedicine & Advanced Technology Research Center","ror":"https://ror.org/014pvr265","country_code":"US","type":"other","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"id":"https://openalex.org/I2802581893","display_name":"United States Army Medical Research and Development Command","ror":"https://ror.org/03cd02q50","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kamal Kumar","raw_affiliation_strings":["Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101964102","display_name":"Li Cheng","orcid":"https://orcid.org/0000-0002-5043-6019"},"institutions":[{"id":"https://openalex.org/I2800986571","display_name":"Telemedicine & Advanced Technology Research Center","ror":"https://ror.org/014pvr265","country_code":"US","type":"other","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"id":"https://openalex.org/I2802581893","display_name":"United States Army Medical Research and Development Command","ror":"https://ror.org/03cd02q50","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Li Cheng","raw_affiliation_strings":["Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016155546","display_name":"Nela Zavaljevski","orcid":null},"institutions":[{"id":"https://openalex.org/I2800986571","display_name":"Telemedicine & Advanced Technology Research Center","ror":"https://ror.org/014pvr265","country_code":"US","type":"other","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"id":"https://openalex.org/I2802581893","display_name":"United States Army Medical Research and Development Command","ror":"https://ror.org/03cd02q50","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nela Zavaljevski","raw_affiliation_strings":["Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000934588","display_name":"David DeShazer","orcid":"https://orcid.org/0000-0003-1758-1238"},"institutions":[{"id":"https://openalex.org/I2801122164","display_name":"United States Army Medical Research Institute of Infectious Diseases","ror":"https://ror.org/01pveve47","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2801122164","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David DeShazer","raw_affiliation_strings":["Bacteriology Division, U.S. Army Medical Research Institute of Infectious Diseases, Fort Detrick, MD, 21702, USA","Bacteriology Division, U.S. Army Medical Research Institute of Infectious Diseases, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bacteriology Division, U.S. Army Medical Research Institute of Infectious Diseases, Fort Detrick, MD, 21702, USA","institution_ids":["https://openalex.org/I2801122164"]},{"raw_affiliation_string":"Bacteriology Division, U.S. Army Medical Research Institute of Infectious Diseases, Fort Detrick, USA","institution_ids":["https://openalex.org/I2801122164"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030271505","display_name":"Anders Wallqvist","orcid":"https://orcid.org/0000-0002-9775-7469"},"institutions":[{"id":"https://openalex.org/I2800986571","display_name":"Telemedicine & Advanced Technology Research Center","ror":"https://ror.org/014pvr265","country_code":"US","type":"other","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"id":"https://openalex.org/I2802581893","display_name":"United States Army Medical Research and Development Command","ror":"https://ror.org/03cd02q50","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anders Wallqvist","raw_affiliation_strings":["Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, MD, 21702, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020594190","display_name":"Jaques Reifman","orcid":"https://orcid.org/0000-0001-7292-2029"},"institutions":[{"id":"https://openalex.org/I2800986571","display_name":"Telemedicine & Advanced Technology Research Center","ror":"https://ror.org/014pvr265","country_code":"US","type":"other","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2800986571","https://openalex.org/I2802581893"]},{"id":"https://openalex.org/I2802581893","display_name":"United States Army Medical Research and Development Command","ror":"https://ror.org/03cd02q50","country_code":"US","type":"facility","lineage":["https://openalex.org/I106965489","https://openalex.org/I1304082316","https://openalex.org/I1330347796","https://openalex.org/I2802581893"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jaques Reifman","raw_affiliation_strings":["Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U,S, Army Medical Research and Materiel Command, Fort Detrick, MD 21702, USA. jaques.reifman.civ@mail.mil","Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U,S, Army Medical Research and Materiel Command, Fort Detrick, MD 21702, USA. jaques.reifman.civ@mail.mil","institution_ids":["https://openalex.org/I2802581893"]},{"raw_affiliation_string":"Department of Defense Biotechnology High Performance Computing Software Applications Institute, Telemedicine and Advanced Technology Research Center, U.S. Army Medical Research and Materiel Command, Fort Detrick, USA","institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5020594190"],"corresponding_institution_ids":["https://openalex.org/I2800986571","https://openalex.org/I2802581893"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.6263,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.82610744,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"15","issue":"1","first_page":"244","last_page":"244"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12951","display_name":"Burkholderia infections and melioidosis","score":0.9753000140190125,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T12951","display_name":"Burkholderia infections and melioidosis","score":0.9753000140190125,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10665","display_name":"Cystic Fibrosis Research Advances","score":0.006899999920278788,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11578","display_name":"Plant Pathogenic Bacteria Studies","score":0.0034000000450760126,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/secretion","display_name":"Secretion","score":0.7678852081298828},{"id":"https://openalex.org/keywords/virulence","display_name":"Virulence","score":0.7144309878349304},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5754034519195557},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.551397979259491},{"id":"https://openalex.org/keywords/pathogenicity-island","display_name":"Pathogenicity island","score":0.5102808475494385},{"id":"https://openalex.org/keywords/effector","display_name":"Effector","score":0.4840375781059265},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.4332488477230072},{"id":"https://openalex.org/keywords/type-three-secretion-system","display_name":"Type three secretion system","score":0.4245869517326355},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.29888594150543213},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17215347290039062},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.103680819272995},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.06936296820640564}],"concepts":[{"id":"https://openalex.org/C49039625","wikidata":"https://www.wikidata.org/wiki/Q84230","display_name":"Secretion","level":2,"score":0.7678852081298828},{"id":"https://openalex.org/C60987743","wikidata":"https://www.wikidata.org/wiki/Q1460232","display_name":"Virulence","level":3,"score":0.7144309878349304},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5754034519195557},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.551397979259491},{"id":"https://openalex.org/C62130838","wikidata":"https://www.wikidata.org/wiki/Q5196163","display_name":"Pathogenicity island","level":4,"score":0.5102808475494385},{"id":"https://openalex.org/C51785407","wikidata":"https://www.wikidata.org/wiki/Q2627568","display_name":"Effector","level":2,"score":0.4840375781059265},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.4332488477230072},{"id":"https://openalex.org/C130211564","wikidata":"https://www.wikidata.org/wiki/Q21199165","display_name":"Type three secretion system","level":4,"score":0.4245869517326355},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.29888594150543213},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17215347290039062},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.103680819272995},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.06936296820640564}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000472","qualifier_name":"pathogenicity","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D042726","descriptor_name":"Burkholderia mallei","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058947","descriptor_name":"Bacterial Secretion Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058947","descriptor_name":"Bacterial Secretion Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058947","descriptor_name":"Bacterial Secretion Systems","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-15-244","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-244","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-244","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25030112","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25030112","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4112206","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4112206","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-15-244","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-244","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-244","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5600000023841858,"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12"}],"awards":[{"id":"https://openalex.org/G7389097685","display_name":null,"funder_award_id":"CBS.MEDBIO.02.10.BH.021","funder_id":"https://openalex.org/F4320332186","funder_display_name":"Defense Threat Reduction Agency"}],"funders":[{"id":"https://openalex.org/F4320332186","display_name":"Defense Threat Reduction Agency","ror":"https://ror.org/04tz64554"},{"id":"https://openalex.org/F4320338280","display_name":"Medical Research and Materiel Command","ror":"https://ror.org/03cd02q50"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2033952228.pdf","grobid_xml":"https://content.openalex.org/works/W2033952228.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W1550463251","https://openalex.org/W1558730833","https://openalex.org/W1969942705","https://openalex.org/W1990452068","https://openalex.org/W1998767819","https://openalex.org/W2003516452","https://openalex.org/W2025767948","https://openalex.org/W2043545998","https://openalex.org/W2048656742","https://openalex.org/W2056351919","https://openalex.org/W2060081211","https://openalex.org/W2069699505","https://openalex.org/W2072967720","https://openalex.org/W2090728933","https://openalex.org/W2096525273","https://openalex.org/W2103017472","https://openalex.org/W2107249189","https://openalex.org/W2110238351","https://openalex.org/W2111051291","https://openalex.org/W2113849888","https://openalex.org/W2116042511","https://openalex.org/W2122274181","https://openalex.org/W2122446797","https://openalex.org/W2126316536","https://openalex.org/W2127683898","https://openalex.org/W2129872128","https://openalex.org/W2134212466","https://openalex.org/W2135415614","https://openalex.org/W2137087452","https://openalex.org/W2137749186","https://openalex.org/W2143387738","https://openalex.org/W2143398242","https://openalex.org/W2144878722","https://openalex.org/W2145514756","https://openalex.org/W2149615908","https://openalex.org/W2155431291","https://openalex.org/W2158439765","https://openalex.org/W2159482845","https://openalex.org/W2163485494","https://openalex.org/W2166270664","https://openalex.org/W2167155938","https://openalex.org/W2170836818","https://openalex.org/W2605068739","https://openalex.org/W4212920271","https://openalex.org/W4231170962","https://openalex.org/W4245803912","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2470108822","https://openalex.org/W1970386319","https://openalex.org/W1985396638","https://openalex.org/W2742891955","https://openalex.org/W4295414647","https://openalex.org/W2156062114","https://openalex.org/W3082644454","https://openalex.org/W2161513080","https://openalex.org/W2115696210","https://openalex.org/W2123680076"],"abstract_inverted_index":{"BACKGROUND:":[0],"Bacterial":[1],"pathogenicity":[2],"represents":[3],"a":[4,13,43,94,194,209],"major":[5],"public":[6],"health":[7],"concern":[8],"worldwide.":[9],"Secretion":[10],"systems":[11,50,233],"are":[12,68,81],"key":[14],"component":[15],"of":[16,61,76,89,96,160,214,238,247],"bacterial":[17,25,102],"pathogenicity,":[18],"as":[19],"they":[20],"provide":[21],"the":[22,36,59,87,145,170,227],"means":[23],"for":[24,65,162,182,199],"proteins":[26,64,105,131,167],"to":[27,230],"penetrate":[28],"host-cell":[29],"membranes":[30],"and":[31,72,78,99,106,115,140,144,204,216],"insert":[32],"themselves":[33],"directly":[34],"into":[35],"host":[37,53,79,108],"cells'":[38],"cytosol.":[39],"Burkholderia":[40,90],"mallei":[41,67,121,130,149,164,185,222],"is":[42,252],"Gram-negative":[44],"bacterium":[45],"that":[46,197],"uses":[47],"multiple":[48],"secretion":[49,62,103,135,165,186,223,232],"during":[51],"its":[52],"infection":[54],"life":[55],"cycle.":[56],"To":[57],"date,":[58],"identities":[60],"system":[63,104,166,187],"B.":[66,120,129,163,184,221],"not":[69,234],"well":[70],"known,":[71],"their":[73,107,137,239,248],"pathogenic":[74,158],"mechanisms":[75,159],"action":[77,161],"factors":[80],"largely":[82],"uncharacterized.":[83],"DESCRIPTION:":[84],"We":[85],"present":[86],"Database":[88],"malleiSecretion":[91],"Systems":[92],"(DBSecSys),":[93],"compilation":[95],"manually":[97],"curated":[98],"computationally":[100,116],"predicted":[101],"factors.":[109],"Currently,":[110],"DBSecSys":[111,174,192,207],"contains":[112],"comprehensive":[113],"experimentally":[114],"derived":[117],"information":[118,155],"about":[119,156,177],"strain":[122],"ATCC":[123],"23344.":[124],"The":[125,151],"database":[126,152,251],"includes":[127,154],"143":[128],"associated":[132,219],"with":[133,191,220],"five":[134],"systems,":[136],"1,635":[138],"human":[139],"murine":[141],"interacting":[142],"targets,":[143],"corresponding":[146,240],"2,400":[147],"host-B.":[148],"interactions.":[150],"also":[153,244],"10":[157],"inferred":[168],"from":[169],"available":[171,253],"literature.":[172],"Additionally,":[173],"provides":[175,208,226],"details":[176],"42":[178],"virulence":[179],"attenuation":[180],"experiments":[181],"27":[183],"proteins.":[188],"Users":[189],"interact":[190],"through":[193,236,245],"Web":[195],"interface":[196],"allows":[198],"data":[200,218],"browsing,":[201],"querying,":[202],"visualizing,":[203],"downloading.":[205],"CONCLUSIONS:":[206],"comprehensive,":[210],"systematically":[211],"organized":[212],"resource":[213],"experimental":[215],"computational":[217],"systems.":[224],"It":[225],"unique":[228],"ability":[229],"study":[231],"only":[235],"characterization":[237,246],"pathogen":[241],"proteins,":[242],"but":[243],"host-interacting":[249],"partners.The":[250],"at":[254],"https://applications.bhsai.org/dbsecsys.":[255]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
