{"id":"https://openalex.org/W2103304056","doi":"https://doi.org/10.1186/1471-2105-15-184","title":"Insights into mechanism kinematics for protein motion simulation","display_name":"Insights into mechanism kinematics for protein motion simulation","publication_year":2014,"publication_date":"2014-06-12","ids":{"openalex":"https://openalex.org/W2103304056","doi":"https://doi.org/10.1186/1471-2105-15-184","mag":"2103304056","pmid":"https://pubmed.ncbi.nlm.nih.gov/24923224"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-15-184","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-184","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-184","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-184","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5070269527","display_name":"Mikel D\u00edez","orcid":"https://orcid.org/0000-0002-3364-5003"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Mikel Diez","raw_affiliation_strings":["Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Alameda de Urquijo s/n, 48013 Bilbao, Spain. mikel.diez@ehu.es","Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Bilbao, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Alameda de Urquijo s/n, 48013 Bilbao, Spain. mikel.diez@ehu.es","institution_ids":["https://openalex.org/I169108374"]},{"raw_affiliation_string":"Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Bilbao, Spain","institution_ids":["https://openalex.org/I169108374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002518876","display_name":"V\u00edctor Petuya","orcid":"https://orcid.org/0000-0002-4120-3838"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"V\u00edctor Petuya","raw_affiliation_strings":["Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Alameda de Urquijo s/n, 48013, Bilbao, Spain","Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Bilbao, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Alameda de Urquijo s/n, 48013, Bilbao, Spain","institution_ids":["https://openalex.org/I169108374"]},{"raw_affiliation_string":"Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Bilbao, Spain","institution_ids":["https://openalex.org/I169108374"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101836939","display_name":"Luis Alfonso Mart\u00ednez\u2010Cruz","orcid":"https://orcid.org/0000-0002-5856-9377"},"institutions":[{"id":"https://openalex.org/I4210112728","display_name":"CIC bioGUNE","ror":"https://ror.org/02x5c5y60","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210112728"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Luis Alfonso Mart\u00ednez-Cruz","raw_affiliation_strings":["CIC bioGUNE Research Centre, Ed. 800 Parque Tecnolgico de Bizkaia, 48160, Derio, Spain","CIC bioGUNE Research Centre, Ed. 800 Parque Tecnolgico de Bizkaia, Derio, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CIC bioGUNE Research Centre, Ed. 800 Parque Tecnolgico de Bizkaia, 48160, Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]},{"raw_affiliation_string":"CIC bioGUNE Research Centre, Ed. 800 Parque Tecnolgico de Bizkaia, Derio, Spain","institution_ids":["https://openalex.org/I4210112728"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5001121191","display_name":"A. Hern\u00e1ndez","orcid":"https://orcid.org/0000-0001-5475-6960"},"institutions":[{"id":"https://openalex.org/I169108374","display_name":"University of the Basque Country","ror":"https://ror.org/000xsnr85","country_code":"ES","type":"education","lineage":["https://openalex.org/I169108374"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alfonso Hern\u00e1ndez","raw_affiliation_strings":["Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Alameda de Urquijo s/n, 48013, Bilbao, Spain","Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Bilbao, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Alameda de Urquijo s/n, 48013, Bilbao, Spain","institution_ids":["https://openalex.org/I169108374"]},{"raw_affiliation_string":"Faculty of Engineering in Bilbao, University of the Basque Country UPV/EHU, Department of Mechanical Engineering, Bilbao, Spain","institution_ids":["https://openalex.org/I169108374"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5070269527"],"corresponding_institution_ids":["https://openalex.org/I169108374"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.2846,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.60509472,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"15","issue":"1","first_page":"184","last_page":"184"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.7746999859809875,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.7746999859809875,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.039799999445676804,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10492","display_name":"Microtubule and mitosis dynamics","score":0.025800000876188278,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/kinematics","display_name":"Kinematics","score":0.831869900226593},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6793725490570068},{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.5311682820320129},{"id":"https://openalex.org/keywords/motion","display_name":"Motion (physics)","score":0.461794376373291},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.45982861518859863},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.3954734206199646},{"id":"https://openalex.org/keywords/control-theory","display_name":"Control theory (sociology)","score":0.3713799715042114},{"id":"https://openalex.org/keywords/simulation","display_name":"Simulation","score":0.36237138509750366},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.33315354585647583},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.0988113284111023}],"concepts":[{"id":"https://openalex.org/C39920418","wikidata":"https://www.wikidata.org/wiki/Q11476","display_name":"Kinematics","level":2,"score":0.831869900226593},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6793725490570068},{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.5311682820320129},{"id":"https://openalex.org/C104114177","wikidata":"https://www.wikidata.org/wiki/Q79782","display_name":"Motion (physics)","level":2,"score":0.461794376373291},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.45982861518859863},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.3954734206199646},{"id":"https://openalex.org/C47446073","wikidata":"https://www.wikidata.org/wiki/Q5165890","display_name":"Control theory (sociology)","level":3,"score":0.3713799715042114},{"id":"https://openalex.org/C44154836","wikidata":"https://www.wikidata.org/wiki/Q45045","display_name":"Simulation","level":1,"score":0.36237138509750366},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.33315354585647583},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0988113284111023},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C2775924081","wikidata":"https://www.wikidata.org/wiki/Q55608371","display_name":"Control (management)","level":2,"score":0.0},{"id":"https://openalex.org/C74650414","wikidata":"https://www.wikidata.org/wiki/Q11397","display_name":"Classical mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007700","descriptor_name":"Kinetics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017433","descriptor_name":"Protein Structure, Secondary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-15-184","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-184","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-184","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24923224","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24923224","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:addi.ehu.es:10810/16489","is_oa":true,"landing_page_url":"http://hdl.handle.net/10810/16489","pdf_url":null,"source":{"id":"https://openalex.org/S4306400469","display_name":"Communities in ADDI (Universidad del Pais Vasco)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210131160","host_organization_name":"Material Physics Center","host_organization_lineage":["https://openalex.org/I4210131160"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:3071099","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4080786","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-15-184","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-184","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-184","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8199999928474426,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"}],"awards":[{"id":"https://openalex.org/G2315118631","display_name":null,"funder_award_id":"UFI 11/29","funder_id":"https://openalex.org/F4320321919","funder_display_name":"Euskal Herriko Unibertsitatea"},{"id":"https://openalex.org/G3103648662","display_name":null,"funder_award_id":"IE07-202","funder_id":"https://openalex.org/F4320321705","funder_display_name":"Eusko Jaurlaritza"},{"id":"https://openalex.org/G474378483","display_name":null,"funder_award_id":"CSD2008-00005","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G7906797769","display_name":null,"funder_award_id":"DPI2011-22955","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"}],"funders":[{"id":"https://openalex.org/F4320321705","display_name":"Eusko Jaurlaritza","ror":"https://ror.org/00pz2fp31"},{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320321919","display_name":"Euskal Herriko Unibertsitatea","ror":"https://ror.org/000xsnr85"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2103304056.pdf","grobid_xml":"https://content.openalex.org/works/W2103304056.grobid-xml"},"referenced_works_count":49,"referenced_works":["https://openalex.org/W64641334","https://openalex.org/W191068586","https://openalex.org/W1530308325","https://openalex.org/W1566694705","https://openalex.org/W1653812874","https://openalex.org/W1673352269","https://openalex.org/W1964410776","https://openalex.org/W1966299504","https://openalex.org/W1969548780","https://openalex.org/W1971355878","https://openalex.org/W1981021420","https://openalex.org/W1990593157","https://openalex.org/W2001008407","https://openalex.org/W2001561947","https://openalex.org/W2003585773","https://openalex.org/W2004370807","https://openalex.org/W2018917669","https://openalex.org/W2020497848","https://openalex.org/W2020846029","https://openalex.org/W2021765900","https://openalex.org/W2024908197","https://openalex.org/W2037348371","https://openalex.org/W2041402034","https://openalex.org/W2044877050","https://openalex.org/W2049902088","https://openalex.org/W2050213954","https://openalex.org/W2050519084","https://openalex.org/W2061090993","https://openalex.org/W2061629466","https://openalex.org/W2061995492","https://openalex.org/W2062809320","https://openalex.org/W2069777230","https://openalex.org/W2084631697","https://openalex.org/W2092516289","https://openalex.org/W2093381148","https://openalex.org/W2110847661","https://openalex.org/W2113994268","https://openalex.org/W2122199548","https://openalex.org/W2126162505","https://openalex.org/W2154212025","https://openalex.org/W2156790586","https://openalex.org/W2159093377","https://openalex.org/W2160544821","https://openalex.org/W2164548935","https://openalex.org/W2169046190","https://openalex.org/W2219883856","https://openalex.org/W2314730711","https://openalex.org/W4249658256","https://openalex.org/W6605225202"],"related_works":["https://openalex.org/W2789522126","https://openalex.org/W2066693961","https://openalex.org/W2953716828","https://openalex.org/W2368363778","https://openalex.org/W2904857019","https://openalex.org/W2944728705","https://openalex.org/W3011538607","https://openalex.org/W2354642913","https://openalex.org/W2043642088","https://openalex.org/W2384143566"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,162,185,223,248],"high":[2],"demanding":[3],"computational":[4,32,143,202],"requirements":[5],"necessary":[6],"to":[7,16,20,34,68,75,105,136,192,232,268],"carry":[8],"out":[9],"protein":[10,21,78,107,115,138,153,243,276],"motion":[11,37,139,154],"simulations":[12,274],"make":[13],"it":[14,72],"difficult":[15],"obtain":[17,193,269],"information":[18],"related":[19],"motion.":[22,108,221,277],"On":[23,39],"the":[24,40,56,77,114,123,129,207,211,215,219,234,237],"one":[25],"hand,":[26,42],"molecular":[27],"dynamics":[28],"simulation":[29,178,235,253],"requires":[30],"huge":[31],"resources":[33],"achieve":[35],"satisfactory":[36],"simulations.":[38],"other":[41],"less":[43],"accurate":[44],"procedures":[45,190],"such":[46,172],"as":[47,80,173],"interpolation":[48],"methods,":[49],"do":[50],"not":[51],"generate":[52],"realistic":[53],"morphs":[54,195],"from":[55],"kinematic":[57,194,216],"point":[58],"of":[59,85,88,167,187,196,210,218,236,250,275],"view.":[60],"Analyzing":[61],"a":[62,81,119,141,149,165,199,242,251,257,262,270],"protein's":[63],"movement":[64],"is":[65,73,160],"very":[66,200],"similar":[67],"serial":[69,82],"robots;":[70],"thus,":[71],"possible":[74],"treat":[76],"chain":[79,264],"mechanism":[83,101,158],"composed":[84],"rotational":[86],"degrees":[87],"freedom.":[89],"Recently,":[90],"based":[91,99,156],"on":[92,100,157],"this":[93,147,227],"hypothesis,":[94],"new":[95,150],"methodologies":[96],"have":[97],"arisen,":[98],"and":[102,180,214,261,272],"robot":[103],"kinematics,":[104],"simulate":[106,137],"Probabilistic":[109],"roadmap":[110],"method,":[111],"which":[112],"discretizes":[113],"configurational":[116],"space":[117],"against":[118],"scoring":[120],"function,":[121],"or":[122],"kinetostatic":[124],"compliance":[125],"method":[126],"that":[127,131],"minimizes":[128],"torques":[130],"appear":[132],"in":[133,226],"bonds,":[134],"aim":[135],"with":[140],"reduced":[142],"cost.":[144],"RESULTS:":[145],"In":[146],"paper":[148,163],"viewpoint":[151],"for":[152],"simulation,":[155],"kinematics":[159],"presented.":[161],"describes":[164],"set":[166],"methodologies,":[168],"combining":[169],"different":[170,230],"techniques":[171],"structure":[174,182,259],"normalization":[175,176],"processes,":[177],"algorithms":[179],"secondary":[181,258],"detection":[183],"procedures.":[184],"combination":[186,249],"all":[188],"these":[189],"allows":[191,267],"proteins":[197],"achieving":[198],"good":[201],"cost-error":[203],"rate,":[204],"while":[205],"maintaining":[206],"biological":[208],"meaning":[209],"obtained":[212,220],"structures":[213],"viability":[217],"CONCLUSIONS:":[222],"procedure":[224,254],"presented":[225],"paper,":[228],"implements":[229],"modules":[231],"perform":[233],"conformational":[238],"change":[239],"suffered":[240],"by":[241,256],"when":[244],"exerting":[245],"its":[246],"function.":[247],"main":[252],"assisted":[255],"process,":[260],"side":[263],"orientation":[265],"strategy,":[266],"fast":[271],"reliable":[273]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
