{"id":"https://openalex.org/W2098141194","doi":"https://doi.org/10.1186/1471-2105-15-18","title":"ISAAC - InterSpecies Analysing Application using Containers","display_name":"ISAAC - InterSpecies Analysing Application using Containers","publication_year":2014,"publication_date":"2014-01-15","ids":{"openalex":"https://openalex.org/W2098141194","doi":"https://doi.org/10.1186/1471-2105-15-18","mag":"2098141194","pmid":"https://pubmed.ncbi.nlm.nih.gov/24428905"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-15-18","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-18","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-18","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-18","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066690683","display_name":"Herbert Baier","orcid":"https://orcid.org/0000-0002-0049-5643"},"institutions":[{"id":"https://openalex.org/I25974101","display_name":"University of W\u00fcrzburg","ror":"https://ror.org/00fbnyb24","country_code":"DE","type":"education","lineage":["https://openalex.org/I25974101"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Herbert Baier","raw_affiliation_strings":["Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, W\u00fcrzburg, 97074, Germany","Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, W\u00fcrzburg, 97074, Germany","institution_ids":["https://openalex.org/I25974101"]},{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, Germany","institution_ids":["https://openalex.org/I25974101"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108354950","display_name":"J\u00f6rg Schultz","orcid":"https://orcid.org/0000-0002-0838-7700"},"institutions":[{"id":"https://openalex.org/I25974101","display_name":"University of W\u00fcrzburg","ror":"https://ror.org/00fbnyb24","country_code":"DE","type":"education","lineage":["https://openalex.org/I25974101"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"J\u00f6rg Schultz","raw_affiliation_strings":["Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, W\u00fcrzburg 97074, Germany. joerg.schultz@biozentrum.uni-wuerzburg.de","Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, W\u00fcrzburg 97074, Germany. joerg.schultz@biozentrum.uni-wuerzburg.de","institution_ids":["https://openalex.org/I25974101"]},{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, Am Hubland, Germany","institution_ids":["https://openalex.org/I25974101"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5108354950"],"corresponding_institution_ids":["https://openalex.org/I25974101"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":1442,"currency":"EUR","value_usd":1555},"fwci":0.0,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.09413143,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"15","issue":"1","first_page":"18","last_page":"18"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.8734999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.8734999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.0340999998152256,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.03189999982714653,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.621399998664856},{"id":"https://openalex.org/keywords/snapshot","display_name":"Snapshot (computer storage)","score":0.5274826884269714},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.4927957355976105},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.4871382415294647},{"id":"https://openalex.org/keywords/tracing","display_name":"Tracing","score":0.4704160988330841},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.46640434861183167},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.43859827518463135},{"id":"https://openalex.org/keywords/viewpoints","display_name":"Viewpoints","score":0.4349808692932129},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3824833035469055},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3295826315879822},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32539495825767517},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2633773386478424},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.26213014125823975},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2359224557876587},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15647119283676147},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11640685796737671}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.621399998664856},{"id":"https://openalex.org/C55282118","wikidata":"https://www.wikidata.org/wiki/Q252683","display_name":"Snapshot (computer storage)","level":2,"score":0.5274826884269714},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.4927957355976105},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.4871382415294647},{"id":"https://openalex.org/C138673069","wikidata":"https://www.wikidata.org/wiki/Q322229","display_name":"Tracing","level":2,"score":0.4704160988330841},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.46640434861183167},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.43859827518463135},{"id":"https://openalex.org/C2776035091","wikidata":"https://www.wikidata.org/wiki/Q7928819","display_name":"Viewpoints","level":2,"score":0.4349808692932129},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3824833035469055},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3295826315879822},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32539495825767517},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2633773386478424},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.26213014125823975},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2359224557876587},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15647119283676147},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11640685796737671},{"id":"https://openalex.org/C153349607","wikidata":"https://www.wikidata.org/wiki/Q36649","display_name":"Visual arts","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-15-18","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-18","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-18","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24428905","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24428905","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2899959","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3897929","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3897929","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3897929","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:opus.bibliothek.uni-wuerzburg.de:11012","is_oa":true,"landing_page_url":"https://opus.bibliothek.uni-wuerzburg.de/frontdoor/index/index/docId/11012","pdf_url":null,"source":{"id":"https://openalex.org/S4306401635","display_name":"Online Publication Service of W\u00fcrzburg University (W\u00fcrzburg University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I25974101","host_organization_name":"University of W\u00fcrzburg","host_organization_lineage":["https://openalex.org/I25974101"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-15-18","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-18","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-18","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5338348843","display_name":null,"funder_award_id":"SPP 1464","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2098141194.pdf","grobid_xml":"https://content.openalex.org/works/W2098141194.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1912468900","https://openalex.org/W1971425971","https://openalex.org/W1980548655","https://openalex.org/W1987847236","https://openalex.org/W1997921822","https://openalex.org/W1998902445","https://openalex.org/W2000351757","https://openalex.org/W2006338143","https://openalex.org/W2017426710","https://openalex.org/W2019234246","https://openalex.org/W2028133290","https://openalex.org/W2039760291","https://openalex.org/W2057545775","https://openalex.org/W2061912939","https://openalex.org/W2065702910","https://openalex.org/W2090969569","https://openalex.org/W2103017472","https://openalex.org/W2107644675","https://openalex.org/W2116211027","https://openalex.org/W2116398954","https://openalex.org/W2122683221","https://openalex.org/W2128016314","https://openalex.org/W2131989143","https://openalex.org/W2133096997","https://openalex.org/W2133465414","https://openalex.org/W2137052779","https://openalex.org/W2140628921","https://openalex.org/W2144907278","https://openalex.org/W2150782426","https://openalex.org/W2153032620","https://openalex.org/W2156443053","https://openalex.org/W2156564520","https://openalex.org/W2158217645","https://openalex.org/W2159482845","https://openalex.org/W2159675211","https://openalex.org/W2160913143","https://openalex.org/W4210290733","https://openalex.org/W4210347168","https://openalex.org/W4233334497","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2018207484","https://openalex.org/W4248144539","https://openalex.org/W2386088810","https://openalex.org/W1603543036","https://openalex.org/W142583359","https://openalex.org/W1917151005","https://openalex.org/W2169501356","https://openalex.org/W2034854683","https://openalex.org/W1983357553","https://openalex.org/W2795964999"],"abstract_inverted_index":{"BACKGROUND:":[0],"Information":[1],"about":[2],"genes,":[3,96],"transcripts":[4,97],"and":[5,54,98,104,118,134,155,182,212,275],"proteins":[6,99],"is":[7,88,177,233,258,264],"spread":[8],"over":[9],"a":[10,255,279],"wide":[11],"variety":[12],"of":[13,39,83,93,95,113,146,169,195,202,217,230,250,272],"databases.":[14],"Different":[15],"tools":[16,44,213,246],"have":[17,71],"been":[18],"developed":[19,72],"using":[20,78],"these":[21,43,108],"databases":[22,211],"to":[23,55,61,89,105,131],"identify":[24],"biological":[25,102],"signals":[26],"in":[27,143,179,278],"gene":[28,58,171,219],"lists":[29,59],"from":[30],"large":[31,218],"scale":[32],"analysis.":[33,115],"Mostly,":[34],"they":[35],"search":[36],"for":[37,214,247,267],"enrichments":[38],"specific":[40],"features.":[41],"But,":[42],"do":[45],"not":[46],"allow":[47],"an":[48,164,240],"explorative":[49,269],"walk":[50],"through":[51],"different":[52,101],"views":[53],"change":[56],"the":[57,74,91,114,144,207,215,228,248],"according":[60],"newly":[62],"upcoming":[63],"stories.":[64],"RESULTS:":[65],"To":[66],"fill":[67],"this":[68,84],"niche,":[69],"we":[70],"ISAAC,":[73],"InterSpecies":[75],"Analysing":[76],"Application":[77],"Containers.":[79],"The":[80],"central":[81],"idea":[82],"web":[85],"based":[86,167,187,226],"tool":[87],"enable":[90],"analysis":[92,216],"sets":[94,109,139,190,277],"under":[100],"viewpoints":[103],"interactively":[106],"modify":[107],"at":[110],"any":[111],"point":[112],"Detailed":[116],"history":[117],"snapshot":[119],"information":[120],"allows":[121],"tracing":[122],"each":[123],"action.":[124],"Furthermore,":[125,236],"one":[126],"can":[127,140,159,197],"easily":[128,259],"switch":[129,160],"back":[130],"previous":[132],"states":[133],"perform":[135],"new":[136,231],"analyses.":[137],"Currently,":[138],"be":[141,198],"viewed":[142],"context":[145],"genomes,":[147],"protein":[148,150,276],"functions,":[149],"interactions,":[151],"pathways,":[152],"regulation,":[153],"diseases":[154],"drugs.":[156],"Additionally,":[157],"users":[158],"between":[161,200,209],"species":[162],"with":[163,239],"automatic,":[165],"orthology":[166],"translation":[168],"existing":[170],"sets.":[172],"As":[173],"todays":[174],"research":[175],"usually":[176],"performed":[178],"larger":[180],"teams":[181],"consortia,":[183],"ISAAC":[184,205,237,263],"provides":[185],"group":[186],"functionalities.":[188],"Here,":[189],"as":[191,193],"well":[192],"results":[194],"analyses":[196,271],"exchanged":[199],"members":[201],"groups.":[203],"CONCLUSIONS:":[204],"fills":[206],"gap":[208],"primary":[210],"lists.":[220],"With":[221],"its":[222],"highly":[223,268],"modular,":[224],"JavaEE":[225],"design,":[227],"implementation":[229],"modules":[232],"straight":[234],"forward.":[235],"comes":[238],"extensive":[241],"web-based":[242],"administration":[243],"interface":[244],"including":[245],"integration":[249],"third":[251],"party":[252],"data.":[253],"Thus,":[254],"local":[256],"installation":[257],"feasible.":[260],"In":[261],"summary,":[262],"tailor":[265],"made":[266],"interactive":[270],"gene,":[273],"transcript":[274],"collaborative":[280],"environment.":[281]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":3}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
