{"id":"https://openalex.org/W1979033523","doi":"https://doi.org/10.1186/1471-2105-15-15","title":"OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer","display_name":"OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer","publication_year":2014,"publication_date":"2014-01-15","ids":{"openalex":"https://openalex.org/W1979033523","doi":"https://doi.org/10.1186/1471-2105-15-15","mag":"1979033523","pmid":"https://pubmed.ncbi.nlm.nih.gov/24428888"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-15-15","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-15","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-15","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-15","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049543850","display_name":"Rimpi Khurana","orcid":"https://orcid.org/0000-0002-0493-6266"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rimpi Khurana","raw_affiliation_strings":["Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102811665","display_name":"Vinod Kumar Verma","orcid":"https://orcid.org/0000-0001-5758-8261"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Vinod Kumar Verma","raw_affiliation_strings":["Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067579209","display_name":"Abdul Rawoof","orcid":"https://orcid.org/0000-0001-7473-7273"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Abdul Rawoof","raw_affiliation_strings":["Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024146313","display_name":"Shrish Tiwari","orcid":"https://orcid.org/0000-0003-2020-1830"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Shrish Tiwari","raw_affiliation_strings":["Bioinformatics, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","Bioinformatics, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Bioinformatics, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110195632","display_name":"Rekha A. Nair","orcid":null},"institutions":[{"id":"https://openalex.org/I2800611740","display_name":"Regional Cancer Center, Thiruvananthapuram","ror":"https://ror.org/011azg567","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I2800611740"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rekha A Nair","raw_affiliation_strings":["Department of Pathology, Regional Cancer Centre, Trivandrum, Kerala, India","Department of Pathology, Regional Cancer Centre, Trivandrum, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Regional Cancer Centre, Trivandrum, Kerala, India","institution_ids":["https://openalex.org/I2800611740"]},{"raw_affiliation_string":"Department of Pathology, Regional Cancer Centre, Trivandrum, India","institution_ids":["https://openalex.org/I2800611740"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086847850","display_name":"Ganesh Mahidhara","orcid":"https://orcid.org/0009-0009-8359-6308"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ganesh Mahidhara","raw_affiliation_strings":["Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054844589","display_name":"Mohammed M. Idris","orcid":"https://orcid.org/0000-0002-1462-3458"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Mohammed M Idris","raw_affiliation_strings":["Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A.P, India","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001013132","display_name":"Alan R. Clarke","orcid":"https://orcid.org/0000-0002-4281-426X"},"institutions":[{"id":"https://openalex.org/I79510175","display_name":"Cardiff University","ror":"https://ror.org/03kk7td41","country_code":"GB","type":"education","lineage":["https://openalex.org/I79510175"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Alan R Clarke","raw_affiliation_strings":["School of Biosciences, Cardiff University, Cardiff, South Glamorgan, UK","School of Biosciences Cardiff University  Cardiff UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Biosciences, Cardiff University, Cardiff, South Glamorgan, UK","institution_ids":["https://openalex.org/I79510175"]},{"raw_affiliation_string":"School of Biosciences Cardiff University  Cardiff UK","institution_ids":["https://openalex.org/I79510175"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060133330","display_name":"Lekha Dinesh Kumar","orcid":"https://orcid.org/0000-0002-1263-7135"},"institutions":[{"id":"https://openalex.org/I185638415","display_name":"Centre for Cellular and Molecular Biology","ror":"https://ror.org/05shq4n12","country_code":"IN","type":"facility","lineage":["https://openalex.org/I185638415","https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I66760702"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Lekha Dinesh Kumar","raw_affiliation_strings":["Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A,P, India. lekha@ccmb.res.in","Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, A,P, India. lekha@ccmb.res.in","institution_ids":["https://openalex.org/I185638415"]},{"raw_affiliation_string":"Cancer Biology, Centre for Cellular & Molecular Biology, Council of scientific and Industrial Research, Hyderabad, India","institution_ids":["https://openalex.org/I185638415"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5001013132","https://openalex.org/A5060133330"],"corresponding_institution_ids":["https://openalex.org/I185638415","https://openalex.org/I79510175"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.9959,"has_fulltext":true,"cited_by_count":33,"citation_normalized_percentile":{"value":0.7269213,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"15","issue":"1","first_page":"15","last_page":"15"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9293000102043152,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9293000102043152,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.007300000172108412,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.005200000014156103,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6120823621749878},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4749041795730591},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4659377634525299},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.4535570442676544},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40732306241989136},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.37589773535728455},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.369390606880188},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.2944261431694031},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.22820118069648743}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6120823621749878},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4749041795730591},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4659377634525299},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.4535570442676544},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40732306241989136},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.37589773535728455},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.369390606880188},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.2944261431694031},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.22820118069648743},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020413","descriptor_name":"3' Untranslated Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020413","descriptor_name":"3' Untranslated Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020413","descriptor_name":"3' Untranslated Regions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-15-15","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-15","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-15","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24428888","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24428888","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:https://orca.cardiff.ac.uk:58430","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401195","display_name":"ORCA Online Research @Cardiff (Cardiff University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79510175","host_organization_name":"Cardiff University","host_organization_lineage":["https://openalex.org/I79510175"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:europepmc.org:2908760","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3926854","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-15-15","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-15-15","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-15-15","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3","score":0.550000011920929}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1979033523.pdf","grobid_xml":"https://content.openalex.org/works/W1979033523.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W1587026990","https://openalex.org/W1722795217","https://openalex.org/W1920303762","https://openalex.org/W1973903209","https://openalex.org/W2006079840","https://openalex.org/W2017199818","https://openalex.org/W2020324446","https://openalex.org/W2035459770","https://openalex.org/W2036557617","https://openalex.org/W2039065483","https://openalex.org/W2043169862","https://openalex.org/W2044832480","https://openalex.org/W2050159684","https://openalex.org/W2050869737","https://openalex.org/W2052750490","https://openalex.org/W2058059940","https://openalex.org/W2061283291","https://openalex.org/W2087064593","https://openalex.org/W2091576301","https://openalex.org/W2110101814","https://openalex.org/W2110193816","https://openalex.org/W2110792972","https://openalex.org/W2112192177","https://openalex.org/W2115565175","https://openalex.org/W2116661471","https://openalex.org/W2120177894","https://openalex.org/W2120456037","https://openalex.org/W2128768066","https://openalex.org/W2133992949","https://openalex.org/W2134118500","https://openalex.org/W2134497014","https://openalex.org/W2150863711","https://openalex.org/W2153210075","https://openalex.org/W2154085311","https://openalex.org/W2163199119","https://openalex.org/W2164940236","https://openalex.org/W2167534419"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2565797512","https://openalex.org/W2050308539","https://openalex.org/W2793648706","https://openalex.org/W3043187607","https://openalex.org/W2019096591","https://openalex.org/W3032012916","https://openalex.org/W1744006947","https://openalex.org/W4243758701"],"abstract_inverted_index":{"BACKGROUND:":[0],"Given":[1],"the":[2,19,80,178,208,214,236],"estimate":[3],"that":[4,16,31,109],"30%":[5],"of":[6,57,82,94,170,189,207,210,216,226],"our":[7],"genes":[8,153,173],"are":[9,28],"controlled":[10],"by":[11,65,143],"microRNAs,":[12],"it":[13,63],"is":[14,51,69,183,230],"essential":[15],"we":[17,110],"understand":[18],"precise":[20],"relationship":[21],"between":[22],"microRNAs":[23,29],"and":[24,48,103,136,154,159,168,186,191,213,218,224],"their":[25,122,131,160,192],"targets.":[26,85],"OncomiRs":[27],"(miRNAs)":[30],"have":[32,45,111],"been":[33,46],"frequently":[34],"shown":[35],"to":[36,78],"be":[37],"deregulated":[38],"in":[39,74,113,194],"cancer.":[40],"However,":[41],"although":[42],"several":[43],"oncomiRs":[44,95,108,190],"identified":[47,126],"characterized,":[49],"there":[50],"as":[52],"yet":[53],"no":[54],"comprehensive":[55,92,185],"compilation":[56],"this":[58],"data":[59],"which":[60,201],"has":[61],"rendered":[62],"underutilized":[64],"cancer":[66,116,196,212],"biologists.":[67],"There":[68],"therefore":[70],"an":[71],"unmet":[72],"need":[73],"generating":[75],"bioinformatic":[76],"platforms":[77],"speed":[79],"identification":[81],"novel":[83,107],"therapeutic":[84,227],"DESCRIPTION:":[86],"We":[87],"describe":[88],"here":[89],"OncomiRdbB,":[90],"a":[91,184],"database":[93,119,140,188],"mined":[96],"from":[97],"different":[98,171],"existing":[99],"databases":[100],"for":[101,233],"mouse":[102],"humans":[104],"along":[105,129],"with":[106,130,162,197],"validated":[112],"human":[114],"breast":[115,195,211],"samples.":[117],"The":[118,156],"also":[120,175],"lists":[121],"respective":[123,163],"predicted":[124],"targets,":[125],"using":[127,177],"miRanda,":[128],"IDs,":[132],"sequences,":[133],"chromosome":[134],"location":[135],"detailed":[137],"description.":[138],"This":[139],"facilitates":[141],"querying":[142],"search":[144],"strings":[145],"including":[146],"microRNA":[147,157,220],"name,":[148],"sequence,":[149],"accession":[150],"number,":[151],"target":[152],"organisms.":[155],"networks":[158],"hubs":[161],"targets":[164,193,225],"at":[165],"3'UTR,":[166],"5'UTR":[167],"exons":[169],"pathway":[172],"were":[174],"deciphered":[176],"'R'":[179],"algorithm.":[180],"CONCLUSION:":[181],"OncomiRdbB":[182,229],"integrated":[187],"multiple":[198],"query":[199],"options":[200],"will":[202],"help":[203],"enhance":[204],"both":[205],"understanding":[206],"biology":[209],"development":[215],"new":[217],"innovative":[219],"based":[221],"diagnostic":[222],"tools":[223],"significance.":[228],"freely":[231],"available":[232],"download":[234],"through":[235],"URL":[237],"link":[238],"http://tdb.ccmb.res.in/OncomiRdbB/index.htm.":[239]},"counts_by_year":[{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":4}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
