{"id":"https://openalex.org/W2081301114","doi":"https://doi.org/10.1186/1471-2105-14-s14-s14","title":"Circles within circles: crosstalk between protein Ser/Thr/Tyr-phosphorylation and Met oxidation","display_name":"Circles within circles: crosstalk between protein Ser/Thr/Tyr-phosphorylation and Met oxidation","publication_year":2013,"publication_date":"2013-10-01","ids":{"openalex":"https://openalex.org/W2081301114","doi":"https://doi.org/10.1186/1471-2105-14-s14-s14","mag":"2081301114","pmid":"https://pubmed.ncbi.nlm.nih.gov/24267725"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-s14-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-s14-s14","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-S14-S14","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-S14-S14","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5056675012","display_name":"R. Shyama Prasad Rao","orcid":"https://orcid.org/0000-0002-2285-6788"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"R Shyama Prasad Rao","raw_affiliation_strings":["Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA","Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082428303","display_name":"Dong Xu","orcid":"https://orcid.org/0000-0002-4809-0514"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dong Xu","raw_affiliation_strings":["Computer Science, University of Missouri, Columbia, MO, 65211, USA","Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033951572","display_name":"Jay J. Thelen","orcid":"https://orcid.org/0000-0001-5995-1562"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jay J Thelen","raw_affiliation_strings":["Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA","Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111990220","display_name":"J\u00e1n A. Miernyk","orcid":"https://orcid.org/0000-0003-3179-0247"},"institutions":[{"id":"https://openalex.org/I76835614","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06","country_code":"US","type":"education","lineage":["https://openalex.org/I76835614"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"J\u00e1n A Miernyk","raw_affiliation_strings":["Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA","Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA","Plant Genetics Research Unit, USDA, Agricultural Research Service, University of Missouri, Columbia, MO, 65211, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]},{"raw_affiliation_string":"Plant Genetics Research Unit, USDA, Agricultural Research Service, University of Missouri, Columbia, MO, 65211, USA","institution_ids":["https://openalex.org/I76835614"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5111990220"],"corresponding_institution_ids":["https://openalex.org/I76835614"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.9986,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.75544201,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"14","issue":"S14","first_page":"S14","last_page":"S14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10966","display_name":"Liver physiology and pathology","score":0.30869999527931213,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10966","display_name":"Liver physiology and pathology","score":0.30869999527931213,"subfield":{"id":"https://openalex.org/subfields/2721","display_name":"Hepatology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10155","display_name":"Nitric Oxide and Endothelin Effects","score":0.12630000710487366,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10169","display_name":"Protein Kinase Regulation and GTPase Signaling","score":0.11620000004768372,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phosphorylation","display_name":"Phosphorylation","score":0.9142951965332031},{"id":"https://openalex.org/keywords/crosstalk","display_name":"Crosstalk","score":0.7543866634368896},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.6116819381713867},{"id":"https://openalex.org/keywords/kinase","display_name":"Kinase","score":0.6003970503807068},{"id":"https://openalex.org/keywords/protein-phosphorylation","display_name":"Protein phosphorylation","score":0.5905380249023438},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5766863226890564},{"id":"https://openalex.org/keywords/oxidative-phosphorylation","display_name":"Oxidative phosphorylation","score":0.5136634707450867},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.5031809210777283},{"id":"https://openalex.org/keywords/residue","display_name":"Residue (chemistry)","score":0.47034695744514465},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.4694755971431732},{"id":"https://openalex.org/keywords/signalling","display_name":"Signalling","score":0.46066394448280334},{"id":"https://openalex.org/keywords/cell-biology","display_name":"Cell biology","score":0.37335312366485596},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32436349987983704},{"id":"https://openalex.org/keywords/protein-kinase-a","display_name":"Protein kinase A","score":0.25036826729774475},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19263958930969238}],"concepts":[{"id":"https://openalex.org/C11960822","wikidata":"https://www.wikidata.org/wiki/Q242736","display_name":"Phosphorylation","level":2,"score":0.9142951965332031},{"id":"https://openalex.org/C169822122","wikidata":"https://www.wikidata.org/wiki/Q230187","display_name":"Crosstalk","level":2,"score":0.7543866634368896},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.6116819381713867},{"id":"https://openalex.org/C184235292","wikidata":"https://www.wikidata.org/wiki/Q421851","display_name":"Kinase","level":2,"score":0.6003970503807068},{"id":"https://openalex.org/C87325107","wikidata":"https://www.wikidata.org/wiki/Q7251493","display_name":"Protein phosphorylation","level":4,"score":0.5905380249023438},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5766863226890564},{"id":"https://openalex.org/C57600042","wikidata":"https://www.wikidata.org/wiki/Q227564","display_name":"Oxidative phosphorylation","level":2,"score":0.5136634707450867},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.5031809210777283},{"id":"https://openalex.org/C2781338088","wikidata":"https://www.wikidata.org/wiki/Q903495","display_name":"Residue (chemistry)","level":2,"score":0.47034695744514465},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.4694755971431732},{"id":"https://openalex.org/C39743133","wikidata":"https://www.wikidata.org/wiki/Q3262595","display_name":"Signalling","level":2,"score":0.46066394448280334},{"id":"https://openalex.org/C95444343","wikidata":"https://www.wikidata.org/wiki/Q7141","display_name":"Cell biology","level":1,"score":0.37335312366485596},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32436349987983704},{"id":"https://openalex.org/C97029542","wikidata":"https://www.wikidata.org/wiki/Q281417","display_name":"Protein kinase A","level":3,"score":0.25036826729774475},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19263958930969238},{"id":"https://openalex.org/C120665830","wikidata":"https://www.wikidata.org/wiki/Q14620","display_name":"Optics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010084","descriptor_name":"Oxidation-Reduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010766","descriptor_name":"Phosphorylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011494","descriptor_name":"Protein Kinases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-14-s14-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-s14-s14","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-S14-S14","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24267725","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24267725","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2845974","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3851202","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-s14-s14","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-s14-s14","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-S14-S14","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/6","display_name":"Clean water and sanitation","score":0.5299999713897705}],"awards":[{"id":"https://openalex.org/G1748469293","display_name":"Identification and Absolute Quantitation of Protein Phosphorylation Networks in Oilseeds","funder_award_id":"0604439","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332605","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2081301114.pdf","grobid_xml":"https://content.openalex.org/works/W2081301114.grobid-xml"},"referenced_works_count":84,"referenced_works":["https://openalex.org/W1481571505","https://openalex.org/W1594773772","https://openalex.org/W1964119268","https://openalex.org/W1964471811","https://openalex.org/W1972378799","https://openalex.org/W1975304761","https://openalex.org/W1975379800","https://openalex.org/W1980473471","https://openalex.org/W1988151613","https://openalex.org/W1991863758","https://openalex.org/W1992512552","https://openalex.org/W1995286508","https://openalex.org/W1996786134","https://openalex.org/W1999483710","https://openalex.org/W2000569488","https://openalex.org/W2002810812","https://openalex.org/W2013632954","https://openalex.org/W2013853442","https://openalex.org/W2014696237","https://openalex.org/W2014977126","https://openalex.org/W2018350156","https://openalex.org/W2018711046","https://openalex.org/W2025163408","https://openalex.org/W2028161249","https://openalex.org/W2029032182","https://openalex.org/W2034614265","https://openalex.org/W2038601075","https://openalex.org/W2041408621","https://openalex.org/W2043025235","https://openalex.org/W2044340366","https://openalex.org/W2044573154","https://openalex.org/W2050067448","https://openalex.org/W2059519613","https://openalex.org/W2060211561","https://openalex.org/W2065002581","https://openalex.org/W2069959344","https://openalex.org/W2070537300","https://openalex.org/W2071149605","https://openalex.org/W2071354103","https://openalex.org/W2072259452","https://openalex.org/W2075394150","https://openalex.org/W2079056345","https://openalex.org/W2083580766","https://openalex.org/W2084046266","https://openalex.org/W2086091776","https://openalex.org/W2088088066","https://openalex.org/W2091583229","https://openalex.org/W2094848622","https://openalex.org/W2095232949","https://openalex.org/W2097675199","https://openalex.org/W2097775940","https://openalex.org/W2098419466","https://openalex.org/W2098621040","https://openalex.org/W2101876702","https://openalex.org/W2102025585","https://openalex.org/W2103404876","https://openalex.org/W2107003257","https://openalex.org/W2111896563","https://openalex.org/W2115643744","https://openalex.org/W2117480021","https://openalex.org/W2117665293","https://openalex.org/W2118439154","https://openalex.org/W2120239584","https://openalex.org/W2121325121","https://openalex.org/W2124471305","https://openalex.org/W2124954099","https://openalex.org/W2127236662","https://openalex.org/W2129777487","https://openalex.org/W2133462086","https://openalex.org/W2134724797","https://openalex.org/W2135238438","https://openalex.org/W2140409722","https://openalex.org/W2145658930","https://openalex.org/W2147013899","https://openalex.org/W2148350911","https://openalex.org/W2161638389","https://openalex.org/W2167321414","https://openalex.org/W2168277231","https://openalex.org/W2168772506","https://openalex.org/W2170295606","https://openalex.org/W2170346203","https://openalex.org/W2315820927","https://openalex.org/W3000547444","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W3025383677","https://openalex.org/W1982829397","https://openalex.org/W2106414650","https://openalex.org/W2347437365","https://openalex.org/W1999412725","https://openalex.org/W1492131881","https://openalex.org/W4390205769","https://openalex.org/W2124137418","https://openalex.org/W2391458050","https://openalex.org/W2086860678"],"abstract_inverted_index":{"BACKGROUND:":[0],"Reversible":[1],"posttranslational":[2],"protein":[3],"modifications":[4,24],"such":[5],"as":[6],"phosphorylation":[7,72,85,144,163,184,204],"of":[8,42,60,70,84,104,133,182],"Ser/Thr/Tyr":[9,45,97,110],"and":[10,19,36,80,164,173,216],"Met":[11,43,90,105,112,148,165,187,202],"oxidation":[12,166],"are":[13,25,114,199,208],"critical":[14],"for":[15,34,162,195,201,211],"both":[16],"metabolic":[17],"regulation":[18],"cellular":[20],"signalling.":[21,177],"Although":[22],"these":[23],"typically":[26],"studied":[27],"individually,":[28],"herein":[29],"we":[30,64,128],"describe":[31],"the":[32,47,58,102,124,151,160,189,192],"potential":[33,161],"cross-talk":[35,212],"hierarchical":[37],"regulation.":[38],"RESULTS:":[39],"The":[40,82,179],"proximity":[41,107,190],"to":[44,56,108,120],"within":[46,91,123],"proteome":[48],"has":[49],"not":[50],"previously":[51],"been":[52],"addressed.":[53],"In":[54],"order":[55],"consider":[57],"possibility":[59],"a":[61,66,89,92,147],"generalized":[62],"interaction,":[63],"performed":[65],"trans-kingdom":[67],"sequence":[68],"analysis":[69,132,157],"known":[71,183],"sites":[73,86,145,185],"in":[74,106,150,171,176,188],"proteins":[75,174,198],"from":[76,135,154],"bacteria,":[77],"fungi,":[78],"plants,":[79],"animals.":[81],"proportion":[83,181],"that":[87,127,141,159],"include":[88],"13-residue":[93,125],"window":[94,126],"centered":[95],"upon":[96],"is":[98,168],"significantly":[99],"less":[100],"than":[101],"occurrence":[103],"all":[109,117],"residues.":[111],"residues":[113],"present":[115],"at":[116],"positions":[118],"(-6":[119],"+6,":[121],"inclusive)":[122],"have":[129,146],"considered.":[130],"Detailed":[131],"sequences":[134],"eight":[136],"disparate":[137],"plant":[138],"taxa":[139],"revealed":[140],"many":[142],"conserved":[143],"residue":[149],"proximity.":[152],"Results":[153],"GO":[155],"enrichment":[156],"indicated":[158],"crosstalk":[167],"most":[169],"prevalent":[170],"kinases":[172],"involved":[175],"CONCLUSION:":[178],"large":[180],"with":[186],"fulfils":[191],"necessary":[193],"condition":[194],"cross-talk.":[196],"Kinases/signalling":[197],"enriched":[200],"around":[203],"sites.":[205],"These":[206],"proteins/sites":[207],"likely":[209],"candidates":[210],"between":[213],"oxidative":[214],"signalling":[215],"reversible":[217],"phosphorylation.":[218]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}