{"id":"https://openalex.org/W2149705092","doi":"https://doi.org/10.1186/1471-2105-14-235","title":"The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases","display_name":"The KUPNetViz: a biological network viewer for multiple -omics datasets in kidney diseases","publication_year":2013,"publication_date":"2013-07-24","ids":{"openalex":"https://openalex.org/W2149705092","doi":"https://doi.org/10.1186/1471-2105-14-235","mag":"2149705092"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-235","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-235","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-235","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-235","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079422639","display_name":"Panagiotis Moulos","orcid":"https://orcid.org/0000-0002-4199-0333"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I4210147779","display_name":"Institut des Maladies M\u00e9taboliques et Cardiovasculaires","ror":"https://ror.org/04d73z393","country_code":"FR","type":"facility","lineage":["https://openalex.org/I134560555","https://openalex.org/I154526488","https://openalex.org/I4210147779","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Panagiotis Moulos","raw_affiliation_strings":["Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM), U1048, Institute of Cardiovascular and Metabolic Disease, 1 avenue Jean Poulh\u00e8s, 31432, Toulouse, France","Universit\u00e9 Toulouse III Paul-Sabatier, 118 route de Narbonne, 31062, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM), U1048, Institute of Cardiovascular and Metabolic Disease, 1 avenue Jean Poulh\u00e8s, 31432, Toulouse, France","institution_ids":["https://openalex.org/I4210147779","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III Paul-Sabatier, 118 route de Narbonne, 31062, Toulouse, France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045393131","display_name":"Julie Klein","orcid":"https://orcid.org/0000-0002-3279-0559"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Julie Klein","raw_affiliation_strings":["School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, M13 9PL, United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, M13 9PL, United Kingdom","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024899492","display_name":"Simon Jupp","orcid":"https://orcid.org/0000-0002-0643-3144"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Simon Jupp","raw_affiliation_strings":["School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, M13 9PL, United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, M13 9PL, United Kingdom","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049799218","display_name":"Robert Stevens","orcid":"https://orcid.org/0000-0002-6038-9025"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Robert Stevens","raw_affiliation_strings":["School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, M13 9PL, United Kingdom"],"affiliations":[{"raw_affiliation_string":"School of Computer Science, University of Manchester, Kilburn Building, Oxford Road, Manchester, M13 9PL, United Kingdom","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090325119","display_name":"Jean\u2010Loup Bascands","orcid":"https://orcid.org/0000-0002-1667-5913"},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I4210147779","display_name":"Institut des Maladies M\u00e9taboliques et Cardiovasculaires","ror":"https://ror.org/04d73z393","country_code":"FR","type":"facility","lineage":["https://openalex.org/I134560555","https://openalex.org/I154526488","https://openalex.org/I4210147779","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jean-Loup Bascands","raw_affiliation_strings":["Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM), U1048, Institute of Cardiovascular and Metabolic Disease, 1 avenue Jean Poulh\u00e8s, 31432, Toulouse, France","Universit\u00e9 Toulouse III Paul-Sabatier, 118 route de Narbonne, 31062, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM), U1048, Institute of Cardiovascular and Metabolic Disease, 1 avenue Jean Poulh\u00e8s, 31432, Toulouse, France","institution_ids":["https://openalex.org/I4210147779","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III Paul-Sabatier, 118 route de Narbonne, 31062, Toulouse, France","institution_ids":["https://openalex.org/I134560555"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009141968","display_name":"Joost P. Schanstra","orcid":"https://orcid.org/0000-0002-7471-372X"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555","https://openalex.org/I4405258862"]},{"id":"https://openalex.org/I4210147779","display_name":"Institut des Maladies M\u00e9taboliques et Cardiovasculaires","ror":"https://ror.org/04d73z393","country_code":"FR","type":"facility","lineage":["https://openalex.org/I134560555","https://openalex.org/I154526488","https://openalex.org/I4210147779","https://openalex.org/I4405258862"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Joost P Schanstra","raw_affiliation_strings":["Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM), U1048, Institute of Cardiovascular and Metabolic Disease, 1 avenue Jean Poulh\u00e8s, 31432, Toulouse, France","Universit\u00e9 Toulouse III Paul-Sabatier, 118 route de Narbonne, 31062, Toulouse, France"],"affiliations":[{"raw_affiliation_string":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale (INSERM), U1048, Institute of Cardiovascular and Metabolic Disease, 1 avenue Jean Poulh\u00e8s, 31432, Toulouse, France","institution_ids":["https://openalex.org/I4210147779","https://openalex.org/I154526488"]},{"raw_affiliation_string":"Universit\u00e9 Toulouse III Paul-Sabatier, 118 route de Narbonne, 31062, Toulouse, France","institution_ids":["https://openalex.org/I134560555"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5079422639"],"corresponding_institution_ids":["https://openalex.org/I134560555","https://openalex.org/I154526488","https://openalex.org/I4210147779"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.3454,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.80846119,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"14","issue":"1","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9800000190734863,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9682999849319458,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.7372424602508545},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6264946460723877},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.6165697574615479},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.5635409951210022},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.5188214182853699},{"id":"https://openalex.org/keywords/graph-drawing","display_name":"Graph drawing","score":0.4494844377040863},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.4252653419971466},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.42437517642974854},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4134325385093689},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34533852338790894},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.30115848779678345},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.2853984236717224},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.11281734704971313}],"concepts":[{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.7372424602508545},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6264946460723877},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.6165697574615479},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.5635409951210022},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.5188214182853699},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.4494844377040863},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.4252653419971466},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.42437517642974854},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4134325385093689},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34533852338790894},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.30115848779678345},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.2853984236717224},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.11281734704971313}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-14-235","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-235","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-235","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/d959862c-03b5-4e61-bc14-b6f9e3a4c4ff","is_oa":false,"landing_page_url":"https://research.manchester.ac.uk/en/publications/d959862c-03b5-4e61-bc14-b6f9e3a4c4ff","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Moulos, P, Klein, J, Jupp, S, Stevens, R, Bascands, J L & Schanstra, J P 2013, 'The KUPNetViz: A biological network viewer for multiple -omics datasets in kidney diseases', BMC Bioinformatics, vol. 14, no. 1, 235. https://doi.org/10.1186/1471-2105-14-235","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:HAL:inserm-00848670v1","is_oa":true,"landing_page_url":"https://inserm.hal.science/inserm-00848670","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2013, 14 (1), pp.235. &#x27E8;10.1186/1471-2105-14-235&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:europepmc.org:2716166","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3725151","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/d959862c-03b5-4e61-bc14-b6f9e3a4c4ff","is_oa":true,"landing_page_url":"http://www.biomedcentral.com/1471-2105/14/235","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Moulos, P, Klein, J, Jupp, S, Stevens, R, Bascands, J L & Schanstra, J P 2013, 'The KUPNetViz: A biological network viewer for multiple -omics datasets in kidney diseases', BMC Bioinformatics, vol. 14, no. 1, 235. https://doi.org/10.1186/1471-2105-14-235","raw_type":"info:eu-repo/semantics/publishedVersion"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-235","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-235","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-235","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2149705092.pdf","grobid_xml":"https://content.openalex.org/works/W2149705092.grobid-xml"},"referenced_works_count":56,"referenced_works":["https://openalex.org/W1600348603","https://openalex.org/W1916339519","https://openalex.org/W1946371345","https://openalex.org/W1971606140","https://openalex.org/W1980980780","https://openalex.org/W1996882626","https://openalex.org/W1998767819","https://openalex.org/W2004053140","https://openalex.org/W2010099799","https://openalex.org/W2017426710","https://openalex.org/W2019012138","https://openalex.org/W2023098599","https://openalex.org/W2034016215","https://openalex.org/W2037548921","https://openalex.org/W2037550429","https://openalex.org/W2041932634","https://openalex.org/W2051922690","https://openalex.org/W2053893264","https://openalex.org/W2057545775","https://openalex.org/W2058865791","https://openalex.org/W2059018062","https://openalex.org/W2076382102","https://openalex.org/W2078022480","https://openalex.org/W2084890338","https://openalex.org/W2086605453","https://openalex.org/W2091789479","https://openalex.org/W2097474120","https://openalex.org/W2099501356","https://openalex.org/W2099953660","https://openalex.org/W2100773022","https://openalex.org/W2105556644","https://openalex.org/W2106502044","https://openalex.org/W2107249189","https://openalex.org/W2109278577","https://openalex.org/W2111222260","https://openalex.org/W2116398954","https://openalex.org/W2118526609","https://openalex.org/W2119406479","https://openalex.org/W2120607558","https://openalex.org/W2124577658","https://openalex.org/W2129348353","https://openalex.org/W2133465414","https://openalex.org/W2135900087","https://openalex.org/W2137522673","https://openalex.org/W2138074715","https://openalex.org/W2139939149","https://openalex.org/W2140635350","https://openalex.org/W2145889895","https://openalex.org/W2149671003","https://openalex.org/W2153490111","https://openalex.org/W2161236251","https://openalex.org/W2169049983","https://openalex.org/W2171039931","https://openalex.org/W2171822840","https://openalex.org/W4210347168","https://openalex.org/W4233334497"],"related_works":["https://openalex.org/W2155492529","https://openalex.org/W4252504573","https://openalex.org/W2158714033","https://openalex.org/W4385510321","https://openalex.org/W78967844","https://openalex.org/W2171298469","https://openalex.org/W2098027521","https://openalex.org/W4214598766","https://openalex.org/W2082199132","https://openalex.org/W1561795279"],"abstract_inverted_index":{"Constant":[0],"technological":[1],"advances":[2],"have":[3],"allowed":[4],"scientists":[5],"in":[6,26,148,203,208,261],"biology":[7,28],"to":[8,13,19,108,167,178],"migrate":[9],"from":[10],"conventional":[11],"single-omics":[12],"multi-omics":[14,63],"experimental":[15,98],"approaches,":[16],"challenging":[17],"bioinformatics":[18],"bridge":[20],"this":[21,55,70],"multi-tiered":[22],"information.":[23],"Ongoing":[24],"research":[25],"renal":[27,67,103,106,209,241],"is":[29,228],"no":[30],"exception.":[31],"The":[32,226],"results":[33],"of":[34,43,83,89,96,132,138,160,170,181,189,197,216,220,247,252,258],"large-scale":[35],"and/or":[36,143],"high":[37],"throughput":[38],"experiments,":[39],"presenting":[40],"a":[41,62,75,200,204,262],"wealth":[42],"information":[44],"on":[45,129],"kidney":[46,224],"disease":[47],"are":[48],"scattered":[49],"across":[50,163],"the":[51,60,81,87,94,130,136,158,168,179,187,195,213,217,248,253,256],"web.":[52],"To":[53],"tackle":[54],"problem,":[56],"we":[57,72],"recently":[58],"presented":[59],"KUPKB,":[61],"data":[64,85,99,251],"repository":[65],"for":[66],"diseases.":[68],"In":[69,154],"article,":[71],"describe":[73],"KUPNetViz,":[74],"biological":[76,116,150,183,233,244],"graph":[77],"exploration":[78,82,237],"tool":[79],"allowing":[80,255],"KUPKB":[84,254],"through":[86],"visualization":[88,152,235],"biomolecule":[90,161],"interactions.":[91],"KUPNetViz":[92,127,190,227],"enables":[93],"integration":[95,196],"multi-layered":[97],"over":[100],"different":[101,164],"species,":[102,165],"locations":[104],"and":[105,112,120,135,177,212,231,236],"diseases":[107],"protein-protein":[109],"interaction":[110,206],"networks":[111,140],"allows":[113,157],"association":[114,219],"with":[115,222,243],"functions,":[117],"biochemical":[118],"pathways":[119],"other":[121,149],"functional":[122],"elements":[123],"such":[124],"as":[125,199],"miRNAs.":[126],"focuses":[128],"simplicity":[131],"its":[133],"usage":[134,193],"clarity":[137],"resulting":[139],"by":[141,191],"reducing":[142],"automating":[144],"advanced":[145],"functionalities":[146],"present":[147],"network":[151,207,234,245],"packages.":[153],"addition,":[155],"it":[156],"extrapolation":[159],"interactions":[162],"leading":[166],"formulations":[169],"new":[171,259],"plausible":[172],"hypotheses,":[173],"adequate":[174],"experiment":[175],"design":[176],"suggestion":[180],"novel":[182,214],"mechanisms.":[184],"We":[185],"demonstrate":[186],"value":[188],"two":[192],"examples:":[194],"calreticulin":[198],"key":[201],"player":[202],"larger":[205],"graft":[210],"rejection":[211],"observation":[215],"strong":[218],"interleukin-6":[221],"polycystic":[223],"disease.":[225],"an":[229],"interactive":[230],"flexible":[232],"tool.":[238],"It":[239],"provides":[240],"biologists":[242],"snapshots":[246],"complex":[249],"integrated":[250],"formulation":[257],"hypotheses":[260],"user":[263],"friendly":[264],"manner.":[265]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
