{"id":"https://openalex.org/W2150893380","doi":"https://doi.org/10.1186/1471-2105-14-218","title":"Software LS-MIDA for efficient mass isotopomer distribution analysis in metabolic modelling","display_name":"Software LS-MIDA for efficient mass isotopomer distribution analysis in metabolic modelling","publication_year":2013,"publication_date":"2013-07-09","ids":{"openalex":"https://openalex.org/W2150893380","doi":"https://doi.org/10.1186/1471-2105-14-218","mag":"2150893380","pmid":"https://pubmed.ncbi.nlm.nih.gov/23837681"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-218","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-218","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-218","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-218","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062451681","display_name":"Zeeshan Ahmed","orcid":"https://orcid.org/0000-0002-7065-1699"},"institutions":[{"id":"https://openalex.org/I25974101","display_name":"University of W\u00fcrzburg","ror":"https://ror.org/00fbnyb24","country_code":"DE","type":"education","lineage":["https://openalex.org/I25974101"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Zeeshan Ahmed","raw_affiliation_strings":["Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany","institution_ids":["https://openalex.org/I25974101"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032158569","display_name":"Saman Zeeshan","orcid":"https://orcid.org/0000-0001-9278-6204"},"institutions":[{"id":"https://openalex.org/I25974101","display_name":"University of W\u00fcrzburg","ror":"https://ror.org/00fbnyb24","country_code":"DE","type":"education","lineage":["https://openalex.org/I25974101"]},{"id":"https://openalex.org/I34809795","display_name":"Medizinische Hochschule Hannover","ror":"https://ror.org/00f2yqf98","country_code":"DE","type":"education","lineage":["https://openalex.org/I34809795"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Saman Zeeshan","raw_affiliation_strings":["Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany","Institute of Molecular and Translational Therapeutic Strategies, Hannover Medical School, Hanover, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany","institution_ids":["https://openalex.org/I25974101"]},{"raw_affiliation_string":"Institute of Molecular and Translational Therapeutic Strategies, Hannover Medical School, Hanover, Germany","institution_ids":["https://openalex.org/I34809795"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027737147","display_name":"Claudia Huber","orcid":"https://orcid.org/0000-0002-1204-8162"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Claudia Huber","raw_affiliation_strings":["Lehrstuhl f\u00fcr Biochemie, Technische Universit\u00e4t M\u00fcnchen, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lehrstuhl f\u00fcr Biochemie, Technische Universit\u00e4t M\u00fcnchen, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061209530","display_name":"Michael Hensel","orcid":"https://orcid.org/0000-0001-6604-6253"},"institutions":[{"id":"https://openalex.org/I170658231","display_name":"Osnabr\u00fcck University","ror":"https://ror.org/04qmmjx98","country_code":"DE","type":"education","lineage":["https://openalex.org/I170658231"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael Hensel","raw_affiliation_strings":["Department of Microbiology, University of Osnabr\u00fcck, Osnabr\u00fcck, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology, University of Osnabr\u00fcck, Osnabr\u00fcck, Germany","institution_ids":["https://openalex.org/I170658231"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043042218","display_name":"Dietmar Schomburg","orcid":"https://orcid.org/0000-0002-3354-822X"},"institutions":[{"id":"https://openalex.org/I94509681","display_name":"Technische Universit\u00e4t Braunschweig","ror":"https://ror.org/010nsgg66","country_code":"DE","type":"education","lineage":["https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Dietmar Schomburg","raw_affiliation_strings":["Department of Bioinformatics and Biochemistry, Technical University Braunschweig, Braunschweig, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Biochemistry, Technical University Braunschweig, Braunschweig, Germany","institution_ids":["https://openalex.org/I94509681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109332116","display_name":"Richard M\u00fcnch","orcid":null},"institutions":[{"id":"https://openalex.org/I94509681","display_name":"Technische Universit\u00e4t Braunschweig","ror":"https://ror.org/010nsgg66","country_code":"DE","type":"education","lineage":["https://openalex.org/I94509681"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Richard M\u00fcnch","raw_affiliation_strings":["Institute for Microbiology, Technical University Braunschweig, Braunschweig, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Microbiology, Technical University Braunschweig, Braunschweig, Germany","institution_ids":["https://openalex.org/I94509681"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086504004","display_name":"Wolfgang Eisenreich","orcid":"https://orcid.org/0000-0002-9832-8279"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Wolfgang Eisenreich","raw_affiliation_strings":["Lehrstuhl f\u00fcr Biochemie, Technische Universit\u00e4t M\u00fcnchen, M\u00fcnchen, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Lehrstuhl f\u00fcr Biochemie, Technische Universit\u00e4t M\u00fcnchen, M\u00fcnchen, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5086202312","display_name":"Thomas Dandekar","orcid":"https://orcid.org/0000-0003-1886-7625"},"institutions":[{"id":"https://openalex.org/I25974101","display_name":"University of W\u00fcrzburg","ror":"https://ror.org/00fbnyb24","country_code":"DE","type":"education","lineage":["https://openalex.org/I25974101"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Thomas Dandekar","raw_affiliation_strings":["Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany","EMBL, Structural and Computational Biology Unit, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Biocenter, University of W\u00fcrzburg, W\u00fcrzburg, Germany","institution_ids":["https://openalex.org/I25974101"]},{"raw_affiliation_string":"EMBL, Structural and Computational Biology Unit, Heidelberg, Germany","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5086202312"],"corresponding_institution_ids":["https://openalex.org/I25974101"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1461,"currency":"EUR","value_usd":1575},"fwci":1.0469,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.7713702,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"14","issue":"1","first_page":"218","last_page":"218"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.6305000185966492,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.6305000185966492,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.2849999964237213,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10631","display_name":"Cancer, Hypoxia, and Metabolism","score":0.021800000220537186,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/isotopomers","display_name":"Isotopomers","score":0.9416085481643677},{"id":"https://openalex.org/keywords/metabolome","display_name":"Metabolome","score":0.7671904563903809},{"id":"https://openalex.org/keywords/metabolic-flux-analysis","display_name":"Metabolic flux analysis","score":0.6681215167045593},{"id":"https://openalex.org/keywords/isotope","display_name":"Isotope","score":0.5770347714424133},{"id":"https://openalex.org/keywords/mass-spectrometry","display_name":"Mass spectrometry","score":0.5636772513389587},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.5467705130577087},{"id":"https://openalex.org/keywords/flux","display_name":"Flux (metallurgy)","score":0.5222105383872986},{"id":"https://openalex.org/keywords/metabolite","display_name":"Metabolite","score":0.5196881890296936},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.5013434886932373},{"id":"https://openalex.org/keywords/stable-isotope-ratio","display_name":"Stable isotope ratio","score":0.4871901869773865},{"id":"https://openalex.org/keywords/biological-system","display_name":"Biological system","score":0.42671045660972595},{"id":"https://openalex.org/keywords/analytical-chemistry","display_name":"Analytical Chemistry (journal)","score":0.3614307641983032},{"id":"https://openalex.org/keywords/molecule","display_name":"Molecule","score":0.2193910777568817},{"id":"https://openalex.org/keywords/chromatography","display_name":"Chromatography","score":0.1672818660736084},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.15521138906478882},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.14667075872421265},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.13969916105270386},{"id":"https://openalex.org/keywords/metabolism","display_name":"Metabolism","score":0.13575196266174316},{"id":"https://openalex.org/keywords/organic-chemistry","display_name":"Organic chemistry","score":0.06815457344055176}],"concepts":[{"id":"https://openalex.org/C127124265","wikidata":"https://www.wikidata.org/wiki/Q2100870","display_name":"Isotopomers","level":3,"score":0.9416085481643677},{"id":"https://openalex.org/C135870905","wikidata":"https://www.wikidata.org/wiki/Q903667","display_name":"Metabolome","level":3,"score":0.7671904563903809},{"id":"https://openalex.org/C160941953","wikidata":"https://www.wikidata.org/wiki/Q6822342","display_name":"Metabolic flux analysis","level":3,"score":0.6681215167045593},{"id":"https://openalex.org/C164304813","wikidata":"https://www.wikidata.org/wiki/Q25276","display_name":"Isotope","level":2,"score":0.5770347714424133},{"id":"https://openalex.org/C162356407","wikidata":"https://www.wikidata.org/wiki/Q180809","display_name":"Mass spectrometry","level":2,"score":0.5636772513389587},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.5467705130577087},{"id":"https://openalex.org/C68709404","wikidata":"https://www.wikidata.org/wiki/Q1134475","display_name":"Flux (metallurgy)","level":2,"score":0.5222105383872986},{"id":"https://openalex.org/C2777477808","wikidata":"https://www.wikidata.org/wiki/Q407595","display_name":"Metabolite","level":2,"score":0.5196881890296936},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.5013434886932373},{"id":"https://openalex.org/C22117777","wikidata":"https://www.wikidata.org/wiki/Q17148629","display_name":"Stable isotope ratio","level":2,"score":0.4871901869773865},{"id":"https://openalex.org/C186060115","wikidata":"https://www.wikidata.org/wiki/Q30336093","display_name":"Biological system","level":1,"score":0.42671045660972595},{"id":"https://openalex.org/C113196181","wikidata":"https://www.wikidata.org/wiki/Q485223","display_name":"Analytical Chemistry (journal)","level":2,"score":0.3614307641983032},{"id":"https://openalex.org/C32909587","wikidata":"https://www.wikidata.org/wiki/Q11369","display_name":"Molecule","level":2,"score":0.2193910777568817},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.1672818660736084},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.15521138906478882},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.14667075872421265},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.13969916105270386},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.13575196266174316},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.06815457344055176},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007554","descriptor_name":"Isotopes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007554","descriptor_name":"Isotopes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007554","descriptor_name":"Isotopes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007554","descriptor_name":"Isotopes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016018","descriptor_name":"Least-Squares Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-14-218","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-218","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-218","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23837681","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23837681","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:alma.01RUT_INST:11663380870004646","is_oa":false,"landing_page_url":"https://scholarship.libraries.rutgers.edu/esploro/outputs/journalArticle/Software-LS-MIDA-for-efficient-mass-isotopomer/991031654010004646","pdf_url":null,"source":{"id":"https://openalex.org/S4210197018","display_name":"View","issn_l":"2688-268X","issn":["2688-268X","2688-3988"],"is_oa":false,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320595","host_organization_name":"Wiley","host_organization_lineage":["https://openalex.org/P4310320595"],"host_organization_lineage_names":["Wiley"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:europepmc.org:2715619","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3720290","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:opus.bibliothek.uni-wuerzburg.de:9588","is_oa":true,"landing_page_url":"https://opus.bibliothek.uni-wuerzburg.de/frontdoor/index/index/docId/9588","pdf_url":null,"source":{"id":"https://openalex.org/S4306401635","display_name":"Online Publication Service of W\u00fcrzburg University (W\u00fcrzburg University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I25974101","host_organization_name":"University of W\u00fcrzburg","host_organization_lineage":["https://openalex.org/I25974101"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-218","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-218","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-218","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6165731237","display_name":null,"funder_award_id":"EI-384/5-1","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2150893380.pdf","grobid_xml":"https://content.openalex.org/works/W2150893380.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W100456203","https://openalex.org/W1963861745","https://openalex.org/W1964491374","https://openalex.org/W1966302864","https://openalex.org/W1966869097","https://openalex.org/W1982977571","https://openalex.org/W1986619536","https://openalex.org/W1992170087","https://openalex.org/W2003060888","https://openalex.org/W2014982379","https://openalex.org/W2021441279","https://openalex.org/W2028655734","https://openalex.org/W2030778948","https://openalex.org/W2034773959","https://openalex.org/W2041900428","https://openalex.org/W2062870685","https://openalex.org/W2071979246","https://openalex.org/W2078662881","https://openalex.org/W2097326265","https://openalex.org/W2098957689","https://openalex.org/W2099179490","https://openalex.org/W2102110710","https://openalex.org/W2133531984","https://openalex.org/W2140040278","https://openalex.org/W2147655559","https://openalex.org/W2164111097","https://openalex.org/W2166980679","https://openalex.org/W2325947722","https://openalex.org/W2475020173","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W1996644818","https://openalex.org/W1965468642","https://openalex.org/W2093500216","https://openalex.org/W2053588008","https://openalex.org/W2916376502","https://openalex.org/W3101161779","https://openalex.org/W423371831","https://openalex.org/W2777729175","https://openalex.org/W2260452057","https://openalex.org/W4295779760"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,22,75,150,185],"knowledge":[2],"of":[3,14,25,38,61,96,103,116,132,157,166,177,200,214],"metabolic":[4,31,40,46,223],"pathways":[5,215],"and":[6,19,42,55,65,71,119,123,173,182,194,216],"fluxes":[7],"is":[8,51,84],"important":[9],"to":[10,16,109,142],"understand":[11],"the":[12,39,45,94,101,106,117,124,130,143,147,167,174,208],"adaptation":[13],"organisms":[15],"their":[17,66],"biotic":[18],"abiotic":[20],"environment.":[21],"specific":[23],"distribution":[24],"stable":[26],"isotope":[27,69,164],"labelled":[28,62,201],"precursors":[29],"into":[30,203],"products":[32],"can":[33],"be":[34],"taken":[35],"as":[36,100,218,220],"fingerprints":[37],"events":[41],"dynamics":[43],"through":[44],"networks.":[47],"An":[48],"open-source":[49,76,190],"software":[50,77,151,187],"required":[52],"that":[53,86,192,206],"easily":[54,193],"rapidly":[56,195],"calculates":[57],"from":[58],"mass":[59,89,108],"spectra":[60],"metabolites,":[63],"derivatives":[64],"fragments":[67,120],"global":[68,163],"excess":[70],"isotopomer":[72,179,204],"distribution.":[73],"RESULTS:":[74],"\"Least":[78],"Square":[79],"Mass":[80],"Isotopomer":[81],"Analyzer\"":[82],"(LS-MIDA)":[83],"presented":[85],"processes":[87],"experimental":[88,125,197],"spectrometry":[90],"(MS)":[91],"data":[92],"on":[93],"basis":[95,209],"metabolite":[97,168],"information":[98],"such":[99],"number":[102],"atoms":[104],"in":[105,134,140,146],"compound,":[107],"charge":[110],"ratio":[111],"(m/e":[112],"or":[113,136,169],"m/z)":[114],"values":[115],"compounds":[118],"under":[121,171],"study,":[122],"relative":[126],"MS":[127,198],"intensities":[128],"reflecting":[129],"enrichments":[131,165,205],"isotopomers":[133],"13C-":[135],"15":[137],"N-labelled":[138],"compounds,":[139],"comparison":[141],"natural":[144],"abundances":[145,176],"unlabelled":[148],"molecules.":[149],"uses":[152],"Brauman's":[153],"least":[154],"square":[155],"method":[156],"linear":[158],"regression.":[159],"As":[160],"a":[161],"result,":[162],"fragment":[170],"study":[172],"molar":[175],"each":[178],"are":[180,207],"obtained":[181],"displayed.":[183],"CONCLUSIONS:":[184],"new":[186],"provides":[188],"an":[189],"platform":[191],"converts":[196],"patterns":[199],"metabolites":[202],"for":[210,221],"subsequent":[211],"observation-driven":[212],"analysis":[213],"fluxes,":[217],"well":[219],"model-driven":[222],"flux":[224],"calculations.":[225]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
