{"id":"https://openalex.org/W2067761505","doi":"https://doi.org/10.1186/1471-2105-14-211","title":"Jenner-predict server: prediction of protein vaccine candidates (PVCs) in bacteria based on host-pathogen interactions","display_name":"Jenner-predict server: prediction of protein vaccine candidates (PVCs) in bacteria based on host-pathogen interactions","publication_year":2013,"publication_date":"2013-07-01","ids":{"openalex":"https://openalex.org/W2067761505","doi":"https://doi.org/10.1186/1471-2105-14-211","mag":"2067761505","pmid":"https://pubmed.ncbi.nlm.nih.gov/23815072"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-211","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-211","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-211","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-211","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5078539372","display_name":"Varun Jaiswal","orcid":"https://orcid.org/0000-0001-8068-0672"},"institutions":[{"id":"https://openalex.org/I153954893","display_name":"Jaypee University of Information Technology","ror":"https://ror.org/00hshrf16","country_code":"IN","type":"education","lineage":["https://openalex.org/I153954893"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Varun Jaiswal","raw_affiliation_strings":["Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh 173234, India","Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh 173234, India","institution_ids":["https://openalex.org/I153954893"]},{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India","institution_ids":["https://openalex.org/I153954893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082982828","display_name":"Sree K. Chanumolu","orcid":null},"institutions":[{"id":"https://openalex.org/I153954893","display_name":"Jaypee University of Information Technology","ror":"https://ror.org/00hshrf16","country_code":"IN","type":"education","lineage":["https://openalex.org/I153954893"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Sree Krishna Chanumolu","raw_affiliation_strings":["Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","institution_ids":["https://openalex.org/I153954893"]},{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India","institution_ids":["https://openalex.org/I153954893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054571372","display_name":"Ankit Gupta","orcid":"https://orcid.org/0000-0002-2310-908X"},"institutions":[{"id":"https://openalex.org/I153954893","display_name":"Jaypee University of Information Technology","ror":"https://ror.org/00hshrf16","country_code":"IN","type":"education","lineage":["https://openalex.org/I153954893"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Ankit Gupta","raw_affiliation_strings":["Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","institution_ids":["https://openalex.org/I153954893"]},{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India","institution_ids":["https://openalex.org/I153954893"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101889702","display_name":"Rajinder Singh Chauhan","orcid":"https://orcid.org/0000-0003-1644-4653"},"institutions":[{"id":"https://openalex.org/I153954893","display_name":"Jaypee University of Information Technology","ror":"https://ror.org/00hshrf16","country_code":"IN","type":"education","lineage":["https://openalex.org/I153954893"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rajinder S Chauhan","raw_affiliation_strings":["Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","institution_ids":["https://openalex.org/I153954893"]},{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India","institution_ids":["https://openalex.org/I153954893"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024247758","display_name":"Chittaranjan Rout","orcid":"https://orcid.org/0000-0001-6777-0446"},"institutions":[{"id":"https://openalex.org/I153954893","display_name":"Jaypee University of Information Technology","ror":"https://ror.org/00hshrf16","country_code":"IN","type":"education","lineage":["https://openalex.org/I153954893"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Chittaranjan Rout","raw_affiliation_strings":["Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, 173234, India","institution_ids":["https://openalex.org/I153954893"]},{"raw_affiliation_string":"Department of Biotechnology and Bioinformatics, Jaypee University of Information Technology, Waknaghat, Solan, Himachal Pradesh, India","institution_ids":["https://openalex.org/I153954893"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5024247758"],"corresponding_institution_ids":["https://openalex.org/I153954893"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.945,"has_fulltext":true,"cited_by_count":84,"citation_normalized_percentile":{"value":0.85946223,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"14","issue":"1","first_page":"211","last_page":"211"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9779999852180481,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.015399999916553497,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10873","display_name":"Bacterial Infections and Vaccines","score":0.0012000000569969416,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pathogen","display_name":"Pathogen","score":0.6376900672912598},{"id":"https://openalex.org/keywords/host","display_name":"Host (biology)","score":0.6100594997406006},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4708561301231384},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.4282553791999817},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42805665731430054},{"id":"https://openalex.org/keywords/host-response","display_name":"Host response","score":0.4171587824821472},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.36872488260269165},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21444857120513916},{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.18830138444900513}],"concepts":[{"id":"https://openalex.org/C2776460866","wikidata":"https://www.wikidata.org/wiki/Q170065","display_name":"Pathogen","level":2,"score":0.6376900672912598},{"id":"https://openalex.org/C126831891","wikidata":"https://www.wikidata.org/wiki/Q221673","display_name":"Host (biology)","level":2,"score":0.6100594997406006},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4708561301231384},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.4282553791999817},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42805665731430054},{"id":"https://openalex.org/C2994443828","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Host response","level":3,"score":0.4171587824821472},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.36872488260269165},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21444857120513916},{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.18830138444900513}],"mesh":[{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000939","descriptor_name":"Epitopes","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000942","descriptor_name":"Antigens, Bacterial","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001426","descriptor_name":"Bacterial Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D001428","descriptor_name":"Bacterial Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001428","descriptor_name":"Bacterial Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D001428","descriptor_name":"Bacterial Vaccines","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013296","descriptor_name":"Streptococcus pneumoniae","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D013296","descriptor_name":"Streptococcus pneumoniae","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D013296","descriptor_name":"Streptococcus pneumoniae","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018829","descriptor_name":"Adhesins, Bacterial","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018829","descriptor_name":"Adhesins, Bacterial","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D018829","descriptor_name":"Adhesins, Bacterial","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D022223","descriptor_name":"Vaccines, Subunit","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D022223","descriptor_name":"Vaccines, Subunit","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D022223","descriptor_name":"Vaccines, Subunit","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D037521","descriptor_name":"Virulence Factors","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054884","descriptor_name":"Host-Pathogen Interactions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-14-211","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-211","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-211","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23815072","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23815072","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2697527","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3701604","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-211","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-211","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-211","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2067761505.pdf","grobid_xml":"https://content.openalex.org/works/W2067761505.grobid-xml"},"referenced_works_count":60,"referenced_works":["https://openalex.org/W1770676897","https://openalex.org/W1963516132","https://openalex.org/W1968766773","https://openalex.org/W1982203347","https://openalex.org/W1986312943","https://openalex.org/W1989654677","https://openalex.org/W1990788531","https://openalex.org/W1996955066","https://openalex.org/W2005095482","https://openalex.org/W2010148273","https://openalex.org/W2026501453","https://openalex.org/W2028339001","https://openalex.org/W2031938605","https://openalex.org/W2033531047","https://openalex.org/W2036301066","https://openalex.org/W2036954453","https://openalex.org/W2047311183","https://openalex.org/W2053748287","https://openalex.org/W2070088956","https://openalex.org/W2073445575","https://openalex.org/W2074002899","https://openalex.org/W2090095553","https://openalex.org/W2096730786","https://openalex.org/W2097870001","https://openalex.org/W2098845726","https://openalex.org/W2102367710","https://openalex.org/W2105999876","https://openalex.org/W2106150646","https://openalex.org/W2107975078","https://openalex.org/W2112874093","https://openalex.org/W2116300056","https://openalex.org/W2119483434","https://openalex.org/W2120318687","https://openalex.org/W2124672930","https://openalex.org/W2126993604","https://openalex.org/W2127223440","https://openalex.org/W2136270736","https://openalex.org/W2136296923","https://openalex.org/W2137003603","https://openalex.org/W2137219016","https://openalex.org/W2141885858","https://openalex.org/W2143226173","https://openalex.org/W2145944884","https://openalex.org/W2149339070","https://openalex.org/W2156039063","https://openalex.org/W2156892490","https://openalex.org/W2158781610","https://openalex.org/W2161396601","https://openalex.org/W2161984798","https://openalex.org/W2162792752","https://openalex.org/W2167652462","https://openalex.org/W2168909179","https://openalex.org/W2169661568","https://openalex.org/W2172101097","https://openalex.org/W2227156953","https://openalex.org/W2467366786","https://openalex.org/W4235859326","https://openalex.org/W4285719527","https://openalex.org/W4320301318","https://openalex.org/W4323053287"],"related_works":["https://openalex.org/W2091398531","https://openalex.org/W2343234619","https://openalex.org/W3173815060","https://openalex.org/W2227774892","https://openalex.org/W4286497165","https://openalex.org/W4246282885","https://openalex.org/W4240212844","https://openalex.org/W2939533806","https://openalex.org/W2077868220","https://openalex.org/W2054853276"],"abstract_inverted_index":{"BACKGROUND:":[0],"Subunit":[1],"vaccines":[2],"based":[3],"on":[4],"recombinant":[5],"proteins":[6,90,166],"have":[7,54,74],"been":[8,121,284],"effective":[9],"in":[10,92,179,197,231,302],"preventing":[11],"infectious":[12],"diseases":[13],"and":[14,51,71,95,138,161,195,234,253,263,271,275,305],"are":[15,97,202,307],"expected":[16],"to":[17,59,99,112,324],"meet":[18],"the":[19,287],"demands":[20],"of":[21,37,83,89,107,125,129,177,181,193,216,228,269,281,294,312],"future":[22],"vaccine":[23,39,63,175,247],"development.":[24,64,240],"Computational":[25],"approach,":[26],"especially":[27],"reverse":[28],"vaccinology":[29],"(RV)":[30],"method":[31],"has":[32,110,120,267,283,317],"enormous":[33],"potential":[34,111,176],"for":[35,62,81,123,237,273,286,310],"identification":[36,82],"protein":[38,146],"candidates":[40,248],"(PVCs)":[41],"from":[42,127,145,225,250],"a":[43],"proteome.":[44],"The":[45,132,214,241,257,314],"existing":[46],"protective":[47,223],"antigen":[48],"prediction":[49,56,124,292,311],"software":[50,70],"web":[52,72,117,133,217,242,296,315],"servers":[53,73],"low":[55],"accuracy":[57,293],"leading":[58],"limited":[60],"applications":[61],"Besides":[65],"machine":[66],"learning":[67],"techniques,":[68],"those":[69],"considered":[75],"only":[76,206],"protein's":[77],"adhesin-likeliness":[78],"as":[79,149,170],"criterion":[80],"PVCs.":[84,114,171,313],"Several":[85],"non-adhesin":[86],"functional":[87,143,326],"classes":[88,147,227],"involved":[91,301],"host-pathogen":[93,136,303],"interactions":[94,137,304],"pathogenesis":[96,109,139,306],"known":[98,142,189,222,246,321],"provide":[100],"protection":[101],"against":[102,221],"bacterial":[103,108,130],"infections.":[104],"Therefore,":[105],"knowledge":[106],"identify":[113],"RESULTS:":[115],"A":[116],"server,":[118],"Jenner-Predict,":[119],"developed":[122],"PVCs":[126,178,201,209,322],"proteomes":[128],"pathogens.":[131],"server":[134,218,239,243,259,297,316,329],"targets":[135],"by":[140,185],"considering":[141],"domains":[144,169,300],"such":[148],"adhesin,":[150],"virulence,":[151],"invasin,":[152],"porin,":[153],"flagellin,":[154],"colonization,":[155],"toxin,":[156],"choline-binding,":[157],"penicillin-binding,":[158],"transferring-binding,":[159],"fibronectin-binding":[160],"solute-binding.":[162],"It":[163,172,266],"predicts":[164],"non-cytosolic":[165],"containing":[167],"above":[168],"also":[173],"provides":[174],"terms":[180],"their":[182],"possible":[183],"immunogenicity":[184],"comparing":[186],"with":[187],"experimentally":[188],"IEDB":[190],"epitopes,":[191],"absence":[192],"autoimmunity":[194],"conservation":[196],"different":[198,325],"strains.":[199],"Predicted":[200],"prioritized":[203],"so":[204],"that":[205,299],"few":[207],"prospective":[208],"could":[210],"be":[211],"validated":[212],"experimentally.":[213],"performance":[215],"was":[219],"evaluated":[220],"antigens":[224],"diverse":[226],"bacteria":[229],"reported":[230,249],"Protegen":[232,274],"database":[233],"datasets":[235],"used":[236],"VaxiJen":[238,264,276],"efficiently":[244],"predicted":[245,319],"Streptococcus":[251],"pneumoniae":[252],"Escherichia":[254],"coli":[255],"proteomes.":[256],"Jenner-Predict":[258,295,328],"outperformed":[260],"NERVE,":[261],"Vaxign":[262],"methods.":[265],"sensitivity":[268],"0.774":[270],"0.711":[272],"dataset,":[277],"respectively":[278],"while":[279],"specificity":[280],"0.940":[282],"obtained":[285],"latter":[288],"dataset.":[289],"CONCLUSIONS:":[290],"Better":[291],"signifies":[298],"better":[308],"criteria":[309],"successfully":[318],"maximum":[320],"belonging":[323],"classes.":[327],"is":[330],"freely":[331],"accessible":[332],"at":[333],"http://117.211.115.67/vaccine/home.html.":[334]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
