{"id":"https://openalex.org/W2106357557","doi":"https://doi.org/10.1186/1471-2105-14-203","title":"Prediction of gene-phenotype associations in humans, mice, and plants using phenologs","display_name":"Prediction of gene-phenotype associations in humans, mice, and plants using phenologs","publication_year":2013,"publication_date":"2013-06-21","ids":{"openalex":"https://openalex.org/W2106357557","doi":"https://doi.org/10.1186/1471-2105-14-203","mag":"2106357557","pmid":"https://pubmed.ncbi.nlm.nih.gov/23800157"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-203","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-203","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-203","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-203","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5021854933","display_name":"John O. Woods","orcid":null},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"John O Woods","raw_affiliation_strings":["Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA","Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, USA"],"affiliations":[{"raw_affiliation_string":"Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, USA","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012796037","display_name":"U. Martin Singh-Blom","orcid":null},"institutions":[{"id":"https://openalex.org/I28166907","display_name":"Karolinska Institutet","ror":"https://ror.org/056d84691","country_code":"SE","type":"education","lineage":["https://openalex.org/I28166907"]},{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["SE","US"],"is_corresponding":false,"raw_author_name":"Ulf Martin Singh-Blom","raw_affiliation_strings":["Unit of Computational Medicine, Department of Medicine, Karolinska Institutet, Stockholm, Sweden","Program in Computational and Applied Mathematics, The University of Texas at Austin, Austin, USA"],"affiliations":[{"raw_affiliation_string":"Unit of Computational Medicine, Department of Medicine, Karolinska Institutet, Stockholm, Sweden","institution_ids":["https://openalex.org/I28166907"]},{"raw_affiliation_string":"Program in Computational and Applied Mathematics, The University of Texas at Austin, Austin, USA","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031830117","display_name":"Jon M. Laurent","orcid":"https://orcid.org/0000-0001-6583-4741"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jon M Laurent","raw_affiliation_strings":["Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA","Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, USA"],"affiliations":[{"raw_affiliation_string":"Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, USA","institution_ids":["https://openalex.org/I86519309"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022723319","display_name":"Kriston L. McGary","orcid":null},"institutions":[{"id":"https://openalex.org/I200719446","display_name":"Vanderbilt University","ror":"https://ror.org/02vm5rt34","country_code":"US","type":"education","lineage":["https://openalex.org/I200719446"]},{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kriston L McGary","raw_affiliation_strings":["Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, USA","Department of Biological Sciences, Vanderbilt University, Nashville, USA"],"affiliations":[{"raw_affiliation_string":"Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, USA","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"Department of Biological Sciences, Vanderbilt University, Nashville, USA","institution_ids":["https://openalex.org/I200719446"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079751395","display_name":"Edward M. Marcotte","orcid":"https://orcid.org/0000-0001-8808-180X"},"institutions":[{"id":"https://openalex.org/I86519309","display_name":"The University of Texas at Austin","ror":"https://ror.org/00hj54h04","country_code":"US","type":"education","lineage":["https://openalex.org/I86519309"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Edward M Marcotte","raw_affiliation_strings":["Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA","Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, USA"],"affiliations":[{"raw_affiliation_string":"Center for Systems & Synthetic Biology, Institute for Cellular & Molecular Biology, The University of Texas at Austin, Austin, TX 78712, USA","institution_ids":["https://openalex.org/I86519309"]},{"raw_affiliation_string":"Center for Systems and Synthetic Biology, Institute for Cellular and Molecular Biology, The University of Texas at Austin, Austin, USA","institution_ids":["https://openalex.org/I86519309"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5021854933"],"corresponding_institution_ids":["https://openalex.org/I86519309"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.9897,"has_fulltext":true,"cited_by_count":43,"citation_normalized_percentile":{"value":0.91627002,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"14","issue":"1","first_page":"203","last_page":"203"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9951000213623047,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9850000143051147,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.8085530996322632},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7490755319595337},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.678325891494751},{"id":"https://openalex.org/keywords/candidate-gene","display_name":"Candidate gene","score":0.6556233167648315},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6000091433525085},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5269936919212341},{"id":"https://openalex.org/keywords/gene-prediction","display_name":"Gene prediction","score":0.44190865755081177},{"id":"https://openalex.org/keywords/phenotypic-trait","display_name":"Phenotypic trait","score":0.4226503074169159},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.41608816385269165},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.27520889043807983},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.213901549577713}],"concepts":[{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.8085530996322632},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7490755319595337},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.678325891494751},{"id":"https://openalex.org/C69991583","wikidata":"https://www.wikidata.org/wiki/Q1423575","display_name":"Candidate gene","level":3,"score":0.6556233167648315},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6000091433525085},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5269936919212341},{"id":"https://openalex.org/C105565629","wikidata":"https://www.wikidata.org/wiki/Q1248292","display_name":"Gene prediction","level":4,"score":0.44190865755081177},{"id":"https://openalex.org/C130073038","wikidata":"https://www.wikidata.org/wiki/Q1211967","display_name":"Phenotypic trait","level":4,"score":0.4226503074169159},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.41608816385269165},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.27520889043807983},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.213901549577713}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002645","descriptor_name":"Chickens","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002645","descriptor_name":"Chickens","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002645","descriptor_name":"Chickens","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015027","descriptor_name":"Zebrafish","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/1471-2105-14-203","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-203","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-203","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23800157","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23800157","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2704615","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3704650","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3704650","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3704650","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:repositories.lib.utexas.edu:2152/27959","is_oa":true,"landing_page_url":"http://hdl.handle.net/2152/27959","pdf_url":null,"source":{"id":"https://openalex.org/S4306400568","display_name":"Texas ScholarWorks (Texas Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210102904","host_organization_name":"Texas Digital Library","host_organization_lineage":["https://openalex.org/I4210102904"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:repositories.lib.utexas.edu:2152/43186","is_oa":true,"landing_page_url":"http://hdl.handle.net/2152/43186","pdf_url":null,"source":{"id":"https://openalex.org/S4306400568","display_name":"Texas ScholarWorks (Texas Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210102904","host_organization_name":"Texas Digital Library","host_organization_lineage":["https://openalex.org/I4210102904"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"doi:10.15781/t2qr4nt1s","is_oa":true,"landing_page_url":"https://doi.org/10.15781/t2qr4nt1s","pdf_url":null,"source":{"id":"https://openalex.org/S4306402198","display_name":"Texas Digital Library (University of Texas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I86519309","host_organization_name":"The University of Texas at Austin","host_organization_lineage":["https://openalex.org/I86519309"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-203","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-203","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-203","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1346015802","display_name":null,"funder_award_id":"F-1515","funder_id":"https://openalex.org/F4320306196","funder_display_name":"Welch Foundation"},{"id":"https://openalex.org/G3899806454","display_name":null,"funder_award_id":"F-1515","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G6135638177","display_name":null,"funder_award_id":"F-1515","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6894402473","display_name":null,"funder_award_id":"Fellowship","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306196","display_name":"Welch Foundation","ror":"https://ror.org/00np6vq88"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2106357557.pdf","grobid_xml":"https://content.openalex.org/works/W2106357557.grobid-xml"},"referenced_works_count":63,"referenced_works":["https://openalex.org/W1494075612","https://openalex.org/W1582432492","https://openalex.org/W1594492056","https://openalex.org/W1601043516","https://openalex.org/W1911171159","https://openalex.org/W1931092714","https://openalex.org/W1968732860","https://openalex.org/W1978033476","https://openalex.org/W1978634139","https://openalex.org/W1978854191","https://openalex.org/W1981468825","https://openalex.org/W1982309495","https://openalex.org/W1984209762","https://openalex.org/W1988774378","https://openalex.org/W1992443735","https://openalex.org/W1998422450","https://openalex.org/W1998633945","https://openalex.org/W1998822072","https://openalex.org/W1999765072","https://openalex.org/W2003338471","https://openalex.org/W2010239416","https://openalex.org/W2022414157","https://openalex.org/W2022775848","https://openalex.org/W2032232458","https://openalex.org/W2032414191","https://openalex.org/W2035197728","https://openalex.org/W2041063545","https://openalex.org/W2042088824","https://openalex.org/W2043716585","https://openalex.org/W2048593866","https://openalex.org/W2062245653","https://openalex.org/W2067331637","https://openalex.org/W2075332428","https://openalex.org/W2077660651","https://openalex.org/W2080335818","https://openalex.org/W2081781433","https://openalex.org/W2082202339","https://openalex.org/W2083977078","https://openalex.org/W2084857157","https://openalex.org/W2086338483","https://openalex.org/W2095418752","https://openalex.org/W2096717473","https://openalex.org/W2098872610","https://openalex.org/W2101216488","https://openalex.org/W2107333582","https://openalex.org/W2109995704","https://openalex.org/W2114627293","https://openalex.org/W2122573606","https://openalex.org/W2123010785","https://openalex.org/W2126176298","https://openalex.org/W2130468805","https://openalex.org/W2132799934","https://openalex.org/W2133045719","https://openalex.org/W2133723991","https://openalex.org/W2141660382","https://openalex.org/W2147957488","https://openalex.org/W2163965551","https://openalex.org/W2167865654","https://openalex.org/W2170391893","https://openalex.org/W2182992961","https://openalex.org/W2246855106","https://openalex.org/W2412837960","https://openalex.org/W2425532757"],"related_works":["https://openalex.org/W1787347804","https://openalex.org/W2583262180","https://openalex.org/W3043251162","https://openalex.org/W2052001298","https://openalex.org/W3014691397","https://openalex.org/W2342312410","https://openalex.org/W1992315305","https://openalex.org/W606739088","https://openalex.org/W2143131037","https://openalex.org/W4245102296"],"abstract_inverted_index":{"We":[0,39],"are":[1],"able":[2],"to":[3],"rank":[4],"gene":[5,37,52],"predictions":[6],"for":[7,28,66],"a":[8,67,80],"significant":[9],"portion":[10],"of":[11,69,77,83],"the":[12,15],"diseases":[13],"in":[14,19,57],"Online":[16],"Mendelian":[17],"Inheritance":[18],"Man":[20],"database.":[21],"Additionally,":[22],"our":[23],"method":[24],"suggests":[25],"candidate":[26],"genes":[27],"mammalian":[29],"seizures":[30],"based":[31],"only":[32],"on":[33],"bacterial":[34],"phenotypes":[35,78],"and":[36,56,74],"orthology.":[38],"demonstrate":[40],"that":[41],"phenotype":[42],"information":[43],"may":[44],"come":[45],"from":[46],"diverse":[47],"sources,":[48],"including":[49],"drug":[50],"sensitivities,":[51],"ontology":[53],"biological":[54],"processes,":[55],"situ":[58],"hybridization":[59],"annotations.":[60],"Finally,":[61],"we":[62],"offer":[63],"testable":[64],"candidates":[65],"variety":[68],"human":[70],"diseases,":[71],"plant":[72],"traits,":[73],"other":[75],"classes":[76],"across":[79],"wide":[81],"array":[82],"species.":[84]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
