{"id":"https://openalex.org/W2030531674","doi":"https://doi.org/10.1186/1471-2105-14-181","title":"Large-scale extraction of accurate drug-disease treatment pairs from biomedical literature for drug repurposing","display_name":"Large-scale extraction of accurate drug-disease treatment pairs from biomedical literature for drug repurposing","publication_year":2013,"publication_date":"2013-06-06","ids":{"openalex":"https://openalex.org/W2030531674","doi":"https://doi.org/10.1186/1471-2105-14-181","mag":"2030531674","pmid":"https://pubmed.ncbi.nlm.nih.gov/23742147"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-14-181","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-181","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-181","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-181","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050134236","display_name":"Rong Xu","orcid":"https://orcid.org/0000-0003-3127-4795"},"institutions":[{"id":"https://openalex.org/I58956616","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666","country_code":"US","type":"education","lineage":["https://openalex.org/I58956616"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rong Xu","raw_affiliation_strings":["Medical Informatics Division, Case Western Reserve, Cleveland, OH, USA. rxx@case.edu","Medical Informatics Division, Case Western Reserve, Cleveland, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Informatics Division, Case Western Reserve, Cleveland, OH, USA. rxx@case.edu","institution_ids":["https://openalex.org/I58956616"]},{"raw_affiliation_string":"Medical Informatics Division, Case Western Reserve, Cleveland, USA","institution_ids":["https://openalex.org/I58956616"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091699488","display_name":"QuanQiu Wang","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"QuanQiu Wang","raw_affiliation_strings":["ThinTek LLC, Palo Alto, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ThinTek LLC, Palo Alto, CA, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5050134236"],"corresponding_institution_ids":["https://openalex.org/I58956616"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":5.8998,"has_fulltext":true,"cited_by_count":111,"citation_normalized_percentile":{"value":0.97045792,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":"14","issue":"1","first_page":"181","last_page":"181"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8323000073432922,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.8323000073432922,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.13019999861717224,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.007899999618530273,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.8154840469360352},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.6695777773857117},{"id":"https://openalex.org/keywords/repurposing","display_name":"Repurposing","score":0.6112287640571594},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5695604085922241},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5394289493560791},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.4977900981903076},{"id":"https://openalex.org/keywords/approved-drug","display_name":"Approved drug","score":0.4776155352592468},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.47736454010009766},{"id":"https://openalex.org/keywords/medline","display_name":"MEDLINE","score":0.46824562549591064},{"id":"https://openalex.org/keywords/precision-medicine","display_name":"Precision medicine","score":0.4393559396266937},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4301309883594513},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4015388488769531},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3966306149959564},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3820311427116394},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3555867075920105},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.13769474625587463},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10911735892295837},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.09937012195587158}],"concepts":[{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.8154840469360352},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.6695777773857117},{"id":"https://openalex.org/C519536355","wikidata":"https://www.wikidata.org/wiki/Q21021151","display_name":"Repurposing","level":2,"score":0.6112287640571594},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5695604085922241},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5394289493560791},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.4977900981903076},{"id":"https://openalex.org/C2777494893","wikidata":"https://www.wikidata.org/wiki/Q4781752","display_name":"Approved drug","level":3,"score":0.4776155352592468},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.47736454010009766},{"id":"https://openalex.org/C2779473830","wikidata":"https://www.wikidata.org/wiki/Q1540899","display_name":"MEDLINE","level":2,"score":0.46824562549591064},{"id":"https://openalex.org/C163763905","wikidata":"https://www.wikidata.org/wiki/Q17075943","display_name":"Precision medicine","level":2,"score":0.4393559396266937},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4301309883594513},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4015388488769531},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3966306149959564},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3820311427116394},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3555867075920105},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.13769474625587463},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10911735892295837},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.09937012195587158},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D004358","descriptor_name":"Drug Therapy","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000191","qualifier_name":"economics","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000191","qualifier_name":"economics","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000191","qualifier_name":"economics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-14-181","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-181","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-181","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23742147","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23742147","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2698326","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3702428","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3702428","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3702428","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-14-181","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-14-181","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-14-181","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1708576474","display_name":null,"funder_award_id":"UL1 RR024989","funder_id":"https://openalex.org/F4320337375","funder_display_name":"National Center for Research Resources"},{"id":"https://openalex.org/G2020374523","display_name":null,"funder_award_id":"UL1 TR000439","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"},{"id":"https://openalex.org/G4349461467","display_name":null,"funder_award_id":"UL1 RR024989","funder_id":"https://openalex.org/F4320310281","funder_display_name":"Case Western Reserve University"}],"funders":[{"id":"https://openalex.org/F4320309680","display_name":"Cleveland Clinic","ror":"https://ror.org/03xjacd83"},{"id":"https://openalex.org/F4320310281","display_name":"Case Western Reserve University","ror":"https://ror.org/051fd9666"},{"id":"https://openalex.org/F4320316438","display_name":"Georgia Clinical and Translational Science Alliance","ror":null},{"id":"https://openalex.org/F4320337375","display_name":"National Center for Research Resources","ror":"https://ror.org/04pw6fb54"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2030531674.pdf","grobid_xml":"https://content.openalex.org/works/W2030531674.grobid-xml"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W91361357","https://openalex.org/W100833113","https://openalex.org/W114492185","https://openalex.org/W116290139","https://openalex.org/W136741500","https://openalex.org/W204556058","https://openalex.org/W231136027","https://openalex.org/W1914850283","https://openalex.org/W1967707196","https://openalex.org/W1986463049","https://openalex.org/W1994658365","https://openalex.org/W1997453506","https://openalex.org/W2004536774","https://openalex.org/W2023736097","https://openalex.org/W2036935277","https://openalex.org/W2053180080","https://openalex.org/W2061016350","https://openalex.org/W2062941476","https://openalex.org/W2076764146","https://openalex.org/W2098201295","https://openalex.org/W2099188065","https://openalex.org/W2099369363","https://openalex.org/W2106797966","https://openalex.org/W2110279753","https://openalex.org/W2121604817","https://openalex.org/W2128054164","https://openalex.org/W2138512826","https://openalex.org/W2152698860","https://openalex.org/W2154896031","https://openalex.org/W2155157373","https://openalex.org/W2158505321","https://openalex.org/W2266350422","https://openalex.org/W2395668008","https://openalex.org/W3125935675"],"related_works":["https://openalex.org/W4387302591","https://openalex.org/W4366833264","https://openalex.org/W3050951227","https://openalex.org/W3161165839","https://openalex.org/W4362678272","https://openalex.org/W2903777166","https://openalex.org/W4382894598","https://openalex.org/W4226479380","https://openalex.org/W3048796709","https://openalex.org/W4281701183"],"abstract_inverted_index":{"BACKGROUND:":[0],"A":[1],"large-scale,":[2,230],"highly":[3,102],"accurate,":[4,231],"machine-understandable":[5,232],"drug-disease":[6,40,87,109,126,213,233],"treatment":[7,88,127,234],"relationship":[8,204],"knowledge":[9,46,235],"base":[10,236],"is":[11,34,48,62,79,207,238],"important":[12],"for":[13,50,54],"computational":[14,255],"approaches":[15],"to":[16,80,106,209],"drug":[17,183,195,256],"repurposing.":[18],"The":[19,74,229],"large":[20,83],"body":[21],"of":[22,38,59,76,85,123,131,145,150,159,164,219,240],"published":[23,91],"biomedical":[24,114,220],"research":[25],"articles":[26],"and":[27,67,147,156,161,186],"clinical":[28],"case":[29],"reports":[30],"available":[31,116],"on":[32,117],"MEDLINE":[33],"a":[35,82,99,121,143,148,157,162],"rich":[36],"source":[37],"FDA-approved":[39,52],"indication":[41],"as":[42,44],"well":[43],"drug-repurposing":[45],"that":[47,175,200,222,237],"crucial":[49],"applying":[51],"drugs":[53],"new":[55],"diseases.":[56],"However,":[57],"much":[58],"this":[60,77,95],"information":[61],"buried":[63],"in":[64,70,136,152,166,194,226,243,254],"free":[65,217],"text":[66,218],"not":[68,134,224],"captured":[69,225],"any":[71],"existing":[72,137],"databases.":[73,139,228],"goal":[75],"study":[78],"extract":[81,107,211],"number":[84],"accurate":[86,103],"pairs":[89,110,178,214,246],"from":[90,111,215,247],"literature.":[92],"RESULTS:":[93],"In":[94,170],"study,":[96,242],"we":[97,172],"developed":[98],"simple":[100,202],"but":[101],"pattern-learning":[104,203],"approach":[105],"treatment-specific":[108],"20":[112],"million":[113],"abstracts":[115],"MEDLINE.":[118],"We":[119,198],"extracted":[120,177],"total":[122],"34,305":[124],"unique":[125],"pairs,":[128,155],"the":[129,176,216],"majority":[130],"which":[132],"are":[133,223],"included":[135],"structured":[138,227,248],"Our":[140],"algorithm":[141,206],"achieved":[142],"precision":[144,158],"0.904":[146,160],"recall":[149,163],"0.131":[151],"extracting":[153,167],"all":[154],"0.842":[165],"frequent":[168],"pairs.":[169],"addition,":[171],"have":[173,191,251],"shown":[174],"strongly":[179],"correlate":[180],"with":[181,245],"both":[182],"target":[184],"genes":[185],"therapeutic":[187],"classes,":[188],"therefore":[189],"may":[190],"high":[192,252],"potential":[193,253],"discovery.":[196],"CONCLUSIONS:":[197],"demonstrated":[199],"our":[201,241],"extraction":[205],"able":[208],"accurately":[210],"many":[212],"literature":[221],"resultant":[239],"combination":[244],"databases,":[249],"will":[250],"repurposing":[257],"tasks.":[258]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":16},{"year":2017,"cited_by_count":10},{"year":2016,"cited_by_count":17},{"year":2015,"cited_by_count":14},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":3}],"updated_date":"2026-06-15T08:34:33.830935","created_date":"2025-10-10T00:00:00"}
