{"id":"https://openalex.org/W2041971688","doi":"https://doi.org/10.1186/1471-2105-13-71","title":"Cancer bioinformatics: A new approach to systems clinical medicine","display_name":"Cancer bioinformatics: A new approach to systems clinical medicine","publication_year":2012,"publication_date":"2012-05-01","ids":{"openalex":"https://openalex.org/W2041971688","doi":"https://doi.org/10.1186/1471-2105-13-71","mag":"2041971688","pmid":"https://pubmed.ncbi.nlm.nih.gov/22549015"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-71","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-71","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-71","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"editorial","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-71","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075748609","display_name":"Duojiao Wu","orcid":"https://orcid.org/0000-0003-2562-8825"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]},{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]},{"id":"https://openalex.org/I4210127074","display_name":"Zhongshan Hospital","ror":"https://ror.org/032x22645","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127074"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Duojiao Wu","raw_affiliation_strings":["Qingpu Branch, Fudan University Zhongshan Hospital, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Qingpu Branch, Fudan University Zhongshan Hospital, Shanghai, China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I4210127074","https://openalex.org/I24943067","https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015800163","display_name":"Catherine M. Rice","orcid":null},"institutions":[{"id":"https://openalex.org/I150016208","display_name":"BioMed Central (United Kingdom)","ror":"https://ror.org/0009s9p66","country_code":"GB","type":"company","lineage":["https://openalex.org/I150016208"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Catherine M Rice","raw_affiliation_strings":["BMC Bioinformatics Executive Editor, BioMed Central, London, UK"],"affiliations":[{"raw_affiliation_string":"BMC Bioinformatics Executive Editor, BioMed Central, London, UK","institution_ids":["https://openalex.org/I150016208"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100402348","display_name":"Xiangdong Wang","orcid":"https://orcid.org/0000-0002-8406-7928"},"institutions":[{"id":"https://openalex.org/I4210128921","display_name":"The First Affiliated Hospital, Sun Yat-sen University","ror":"https://ror.org/037p24858","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210128921"]},{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]},{"id":"https://openalex.org/I4210127074","display_name":"Zhongshan Hospital","ror":"https://ror.org/032x22645","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210127074"]},{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xiangdong Wang","raw_affiliation_strings":["Department of Pulmonary Medicine, Fudan University Zhongshan Hospital, Shanghai, China","Qingpu Branch, Fudan University Zhongshan Hospital, Shanghai, China"],"affiliations":[{"raw_affiliation_string":"Department of Pulmonary Medicine, Fudan University Zhongshan Hospital, Shanghai, China","institution_ids":["https://openalex.org/I24943067","https://openalex.org/I4210127074"]},{"raw_affiliation_string":"Qingpu Branch, Fudan University Zhongshan Hospital, Shanghai, China","institution_ids":["https://openalex.org/I4210128921","https://openalex.org/I4210127074","https://openalex.org/I24943067","https://openalex.org/I157773358"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100402348"],"corresponding_institution_ids":["https://openalex.org/I157773358","https://openalex.org/I24943067","https://openalex.org/I4210127074","https://openalex.org/I4210128921"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.1451,"has_fulltext":true,"cited_by_count":105,"citation_normalized_percentile":{"value":0.87245756,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"13","issue":"1","first_page":"71","last_page":"71"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11287","display_name":"Cancer Genomics and Diagnostics","score":0.9954000115394592,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9918000102043152,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.5596449375152588},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5175430178642273},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48720234632492065},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4723908603191376},{"id":"https://openalex.org/keywords/translational-bioinformatics","display_name":"Translational bioinformatics","score":0.4290158450603485},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.37038129568099976},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.3322465121746063},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2813572287559509},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.2648451328277588},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13890790939331055},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.12589776515960693},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09031274914741516},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08903631567955017}],"concepts":[{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.5596449375152588},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5175430178642273},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48720234632492065},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4723908603191376},{"id":"https://openalex.org/C163293594","wikidata":"https://www.wikidata.org/wiki/Q7834541","display_name":"Translational bioinformatics","level":5,"score":0.4290158450603485},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.37038129568099976},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.3322465121746063},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2813572287559509},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.2648451328277588},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13890790939331055},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.12589776515960693},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09031274914741516},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08903631567955017}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-13-71","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-71","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-71","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22549015","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22549015","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:d6bea99c442d4c8bb023b2c6b63e899e","is_oa":true,"landing_page_url":"https://doaj.org/article/d6bea99c442d4c8bb023b2c6b63e899e","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 71 (2012)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2426184","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3424139","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-71","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-71","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-71","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6800000071525574,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2041971688.pdf","grobid_xml":"https://content.openalex.org/works/W2041971688.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1979347310","https://openalex.org/W1986129954","https://openalex.org/W2035530476","https://openalex.org/W2043201947","https://openalex.org/W2061152807","https://openalex.org/W2062725167","https://openalex.org/W2078625967","https://openalex.org/W2082490944","https://openalex.org/W2083396498","https://openalex.org/W2095943598","https://openalex.org/W2098249665","https://openalex.org/W2118104220","https://openalex.org/W2130284297","https://openalex.org/W2145869919","https://openalex.org/W2148752410","https://openalex.org/W2152973812","https://openalex.org/W2171064835","https://openalex.org/W2329656362","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4298042893","https://openalex.org/W2948266037","https://openalex.org/W2121784101","https://openalex.org/W2050178430","https://openalex.org/W4237553041","https://openalex.org/W1699086943","https://openalex.org/W4285224345","https://openalex.org/W103890959","https://openalex.org/W2156006239","https://openalex.org/W1893179045"],"abstract_inverted_index":{"Cancer":[0,124,159],"is":[1,88,126],"one":[2],"of":[3,7,38,48,63,83,97,122,132,150,164,173,180,186,211,218],"the":[4,11,30,39,46,69,133,140,148,162,178,184,209,216],"commonest":[5],"causes":[6],"patient":[8],"death":[9],"in":[10,18,29,81,137,152,200],"clinic":[12],"and":[13,36,53,59,61,71,75,90,113,120,129,139,143,171,191,203,214],"a":[14,94,127],"complex":[15],"disease":[16,40],"occurring":[17],"multiple":[19,23],"organs":[20],"per":[21,25],"system,":[22],"systems":[24,106,134,153,205],"organ,":[26],"or":[27],"both,":[28],"body.":[31],"The":[32,194],"poor":[33],"diagnoses,":[34],"therapies":[35,119],"prognoses":[37],"could":[41],"be":[42],"mainly":[43],"due":[44],"to":[45,92,104,116,145,176,207],"variation":[47],"severities,":[49],"durations,":[50],"locations,":[51],"sensitivity":[52],"resistance":[54],"against":[55],"drugs,":[56],"cell":[57],"differentiation":[58],"origin,":[60],"understanding":[62],"pathogenesis.":[64],"With":[65],"increasing":[66],"evidence":[67],"that":[68],"interaction":[70],"network":[72,189],"between":[73],"genes":[74],"proteins":[76],"play":[77],"an":[78],"important":[79,91,130],"role":[80],"investigation":[82],"cancer":[84,102,138,151,181,201],"molecular":[85],"mechanisms,":[86],"it":[87],"necessary":[89],"introduce":[93],"new":[95,198],"concept":[96],"Systems":[98],"Clinical":[99,174],"Medicine":[100,170],"into":[101],"research,":[103],"integrate":[105],"biology,":[107],"clinical":[108,135,154,212],"science,":[109],"omics-based":[110],"technology,":[111],"bioinformatics":[112,125,182,187,202],"computational":[114,204],"science":[115],"improve":[117,215],"diagnosis,":[118],"prognosis":[121],"diseases.":[123],"critical":[128],"part":[131],"medicine":[136],"core":[141],"tool":[142],"approach":[144],"carry":[146],"out":[147],"investigations":[149],"medicine.":[155,193],"\"Thematic":[156],"Series":[157,195],"on":[158,197],"Bioinformatics\"":[160],"gather":[161],"strength":[163],"BMC":[165,167],"Bioinformatics,":[166],"Cancer,":[168],"Genome":[169],"Journal":[172],"Bioinformatics":[175],"headline":[177],"application":[179],"for":[183],"development":[185],"methods,":[188],"biomarkers":[190],"precision":[192],"focuses":[196],"developments":[199],"biology":[206],"explore":[208],"potential":[210],"applications":[213],"outcomes":[217],"patients":[219],"with":[220],"cancer.":[221]},"counts_by_year":[{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":17},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":7},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":5}],"updated_date":"2026-03-18T14:38:29.013473","created_date":"2025-10-10T00:00:00"}
