{"id":"https://openalex.org/W2013665240","doi":"https://doi.org/10.1186/1471-2105-13-63","title":"Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation","display_name":"Predicting the outer membrane proteome of Pasteurella multocida based on consensus prediction enhanced by results integration and manual confirmation","publication_year":2012,"publication_date":"2012-04-27","ids":{"openalex":"https://openalex.org/W2013665240","doi":"https://doi.org/10.1186/1471-2105-13-63","mag":"2013665240","pmid":"https://pubmed.ncbi.nlm.nih.gov/22540951"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-63","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-63","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-63","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-63","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090228347","display_name":"Teerasak E-komon","orcid":null},"institutions":[{"id":"https://openalex.org/I7882870","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53","country_code":"GB","type":"education","lineage":["https://openalex.org/I7882870"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Teerasak E-komon","raw_affiliation_strings":["Institute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Sir Graeme Davies Building, Glasgow G12 8QQ, UK","Institute of Infection, Immunity and Inflammation,#R#College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Sir Graeme Davies Building, Glasgow G12 8QQ, UK","institution_ids":["https://openalex.org/I7882870"]},{"raw_affiliation_string":"Institute of Infection, Immunity and Inflammation,#R#College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK","institution_ids":["https://openalex.org/I7882870"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062218408","display_name":"Richard Burchmore","orcid":"https://orcid.org/0000-0003-1663-9004"},"institutions":[{"id":"https://openalex.org/I7882870","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53","country_code":"GB","type":"education","lineage":["https://openalex.org/I7882870"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Richard Burchmore","raw_affiliation_strings":["Institute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Sir Graeme Davies Building, Glasgow, G12 8QQ, UK","Institute of Infection, Immunity and Inflammation,#R#College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Sir Graeme Davies Building, Glasgow, G12 8QQ, UK","institution_ids":["https://openalex.org/I7882870"]},{"raw_affiliation_string":"Institute of Infection, Immunity and Inflammation,#R#College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK","institution_ids":["https://openalex.org/I7882870"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068462570","display_name":"Pawel Herzyk","orcid":"https://orcid.org/0000-0002-7439-292X"},"institutions":[{"id":"https://openalex.org/I7882870","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53","country_code":"GB","type":"education","lineage":["https://openalex.org/I7882870"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Pawel Herzyk","raw_affiliation_strings":["Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Joseph Black Building, Glasgow, G12 8QQ, UK","Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow  Glasgow UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow, Joseph Black Building, Glasgow, G12 8QQ, UK","institution_ids":["https://openalex.org/I7882870"]},{"raw_affiliation_string":"Institute of Molecular, Cell and Systems Biology, College of Medical, Veterinary and Life Sciences, University of Glasgow  Glasgow UK","institution_ids":["https://openalex.org/I7882870"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101425836","display_name":"Robert L. Davies","orcid":"https://orcid.org/0000-0002-6342-2222"},"institutions":[{"id":"https://openalex.org/I7882870","display_name":"University of Glasgow","ror":"https://ror.org/00vtgdb53","country_code":"GB","type":"education","lineage":["https://openalex.org/I7882870"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Robert Davies","raw_affiliation_strings":["Institute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Sir Graeme Davies Building, Glasgow, G12 8QQ, UK","Institute of Infection, Immunity and Inflammation,#R#College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Infection, Immunity and Inflammation, College of Medical, Veterinary and Life Sciences, University of Glasgow, Sir Graeme Davies Building, Glasgow, G12 8QQ, UK","institution_ids":["https://openalex.org/I7882870"]},{"raw_affiliation_string":"Institute of Infection, Immunity and Inflammation,#R#College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow, UK","institution_ids":["https://openalex.org/I7882870"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5101425836"],"corresponding_institution_ids":["https://openalex.org/I7882870"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.7186,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.83545635,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"13","issue":"1","first_page":"63","last_page":"63"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.5989999771118164,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.5989999771118164,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11688","display_name":"Microbial infections and disease research","score":0.19419999420642853,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.10329999774694443,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pasteurella-multocida","display_name":"Pasteurella multocida","score":0.9048341512680054},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.740546703338623},{"id":"https://openalex.org/keywords/bacterial-outer-membrane","display_name":"Bacterial outer membrane","score":0.7220361232757568},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6702340245246887},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6412848234176636},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6171929240226746},{"id":"https://openalex.org/keywords/transmembrane-protein","display_name":"Transmembrane protein","score":0.5387085676193237},{"id":"https://openalex.org/keywords/membrane-protein","display_name":"Membrane protein","score":0.4656883478164673},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.45366647839546204},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4315210282802582},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20972847938537598},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.12463480234146118},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.07203993201255798}],"concepts":[{"id":"https://openalex.org/C2776796551","wikidata":"https://www.wikidata.org/wiki/Q310656","display_name":"Pasteurella multocida","level":3,"score":0.9048341512680054},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.740546703338623},{"id":"https://openalex.org/C146587185","wikidata":"https://www.wikidata.org/wiki/Q258248","display_name":"Bacterial outer membrane","level":4,"score":0.7220361232757568},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6702340245246887},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6412848234176636},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6171929240226746},{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.5387085676193237},{"id":"https://openalex.org/C144647389","wikidata":"https://www.wikidata.org/wiki/Q423042","display_name":"Membrane protein","level":3,"score":0.4656883478164673},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.45366647839546204},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4315210282802582},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20972847938537598},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.12463480234146118},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.07203993201255798},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.0},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001425","descriptor_name":"Bacterial Outer Membrane Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016979","descriptor_name":"Pasteurella multocida","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D020543","descriptor_name":"Proteome","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-13-63","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-63","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-63","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22540951","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22540951","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:eprints.gla.ac.uk:67505","is_oa":false,"landing_page_url":"http://eprints.gla.ac.uk/view/author/11559.html>","pdf_url":null,"source":{"id":"https://openalex.org/S4210235606","display_name":"ENLIGHTEN (Jurnal Bimbingan dan Konseling Islam)","issn_l":"2622-8912","issn":["2622-8912","2622-8920"],"is_oa":false,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Articles"},{"id":"pmh:oai:europepmc.org:2408637","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3403877","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:50b2c522a0c040158be904b06c964b65","is_oa":true,"landing_page_url":"https://doaj.org/article/50b2c522a0c040158be904b06c964b65","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 63 (2012)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-63","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-63","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-63","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","score":0.6299999952316284,"display_name":"Reduced inequalities"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2013665240.pdf","grobid_xml":"https://content.openalex.org/works/W2013665240.grobid-xml"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W1553597441","https://openalex.org/W1605593725","https://openalex.org/W1821139715","https://openalex.org/W1962713699","https://openalex.org/W1966848927","https://openalex.org/W1972475361","https://openalex.org/W1973253766","https://openalex.org/W1974974657","https://openalex.org/W1975304761","https://openalex.org/W1978164115","https://openalex.org/W1982500800","https://openalex.org/W1984286807","https://openalex.org/W1991608395","https://openalex.org/W1992371389","https://openalex.org/W1993346240","https://openalex.org/W1998271375","https://openalex.org/W2010795778","https://openalex.org/W2012534599","https://openalex.org/W2018919471","https://openalex.org/W2022267063","https://openalex.org/W2022867347","https://openalex.org/W2029116706","https://openalex.org/W2033468519","https://openalex.org/W2036790151","https://openalex.org/W2043165033","https://openalex.org/W2058398950","https://openalex.org/W2059784037","https://openalex.org/W2061786728","https://openalex.org/W2062320000","https://openalex.org/W2063608300","https://openalex.org/W2073644495","https://openalex.org/W2074933200","https://openalex.org/W2076726326","https://openalex.org/W2082667898","https://openalex.org/W2087548537","https://openalex.org/W2089047063","https://openalex.org/W2093703685","https://openalex.org/W2093788819","https://openalex.org/W2094684607","https://openalex.org/W2101475413","https://openalex.org/W2105255303","https://openalex.org/W2107247090","https://openalex.org/W2108564508","https://openalex.org/W2119587675","https://openalex.org/W2128298966","https://openalex.org/W2128361588","https://openalex.org/W2128692287","https://openalex.org/W2131778683","https://openalex.org/W2135364877","https://openalex.org/W2143801201","https://openalex.org/W2144338701","https://openalex.org/W2147838733","https://openalex.org/W2148833420","https://openalex.org/W2150408357","https://openalex.org/W2152770371","https://openalex.org/W2154202919","https://openalex.org/W2159840876","https://openalex.org/W2160072419","https://openalex.org/W2160452746","https://openalex.org/W2161257366","https://openalex.org/W2161794813","https://openalex.org/W2162792752","https://openalex.org/W2164154943","https://openalex.org/W2164186284","https://openalex.org/W2764471993"],"related_works":["https://openalex.org/W3080747046","https://openalex.org/W1989495742","https://openalex.org/W2411384411","https://openalex.org/W2053858585","https://openalex.org/W4388182537","https://openalex.org/W2146899109","https://openalex.org/W1977121829","https://openalex.org/W2768043139","https://openalex.org/W2135749642","https://openalex.org/W2097747021"],"abstract_inverted_index":{"BACKGROUND:":[0],"Outer":[1],"membrane":[2,29,65,268],"proteins":[3,110,148],"(OMPs)":[4],"of":[5,40,62,100,158,193,239,257,270],"Pasteurella":[6],"multocida":[7,97,245],"have":[8],"various":[9],"functions":[10],"related":[11],"to":[12,89,189,201,250,264],"virulence":[13],"and":[14,16,31,55,86,104,139,174,179,186,212,246],"pathogenesis":[15],"represent":[17],"important":[18],"targets":[19],"for":[20,119,127,133,141],"vaccine":[21],"development.":[22],"Various":[23],"bioinformatic":[24,229],"algorithms":[25],"can":[26,261],"predict":[27,203],"outer":[28,64,267],"localization":[30,130],"discriminate":[32],"OMPs":[33,92,206,214,241,249],"by":[34,45,50,116],"structure":[35],"or":[36],"function.":[37],"The":[38,145,228],"designation":[39],"a":[41,155,163,168,196,254],"confident":[42],"prediction":[43,61],"framework":[44,230],"integrating":[46],"different":[47,75],"predictors":[48,76,138],"followed":[49],"consensus":[51,120,146],"prediction,":[52,185],"results":[53],"integration":[54],"manual":[56,164],"confirmation":[57,165],"will":[58],"improve":[59],"the":[60,63,69,128,134,142,191,208,216,224,237,266],"proteome.":[66],"RESULTS:":[67],"In":[68],"present":[70],"study,":[71],"we":[72,198],"used":[73],"10":[74],"classified":[77],"into":[78,154],"three":[79,132],"groups":[80],"(subcellular":[81],"localization,":[82],"transmembrane":[83,135],"\u03b2-barrel":[84,136],"protein":[85,137],"lipoprotein":[87,143],"predictors)":[88],"identify":[90],"putative":[91,205,240],"from":[93,151,207,215],"two":[94,124,225],"available":[95],"P.":[96,244],"genomes:":[98],"those":[99],"avian":[101,209],"strain":[102,107,210,218],"Pm70":[103],"porcine":[105,217],"non-toxigenic":[106],"3480.":[108],"Predicted":[109],"in":[111,232,243],"each":[112,152],"group":[113,153],"were":[114,149,199],"filtered":[115],"optimized":[117],"criteria":[118],"prediction:":[121],"at":[122],"least":[123],"positive":[125],"predictions":[126],"subcellular":[129],"predictors,":[131],"one":[140],"predictors.":[144],"predicted":[147],"integrated":[150],"single":[156],"list":[157],"proteins.":[159],"We":[160],"further":[161],"incorporated":[162],"step":[166],"including":[167],"public":[169],"database":[170],"search":[171],"against":[172],"PubMed":[173],"sequence":[175,178],"analyses,":[176],"e.g.":[177],"structural":[180],"homology,":[181],"conserved":[182],"motifs/domains,":[183],"functional":[184],"protein-protein":[187],"interactions":[188],"enhance":[190],"confidence":[192],"prediction.":[194],"As":[195],"result,":[197],"able":[200],"confidently":[202],"98":[204],"genome":[211,219],"107":[213],"with":[220,253],"83%":[221],"overlap":[222],"between":[223],"genomes.":[226],"CONCLUSIONS:":[227],"developed":[231],"this":[233],"study":[234],"has":[235],"increased":[236],"number":[238],"identified":[242,252],"allowed":[247],"these":[248],"be":[251,262],"higher":[255],"degree":[256],"confidence.":[258],"Our":[259],"approach":[260],"applied":[263],"investigate":[265],"proteomes":[269],"other":[271],"Gram-negative":[272],"bacteria.":[273]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":5}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
