{"id":"https://openalex.org/W2017986168","doi":"https://doi.org/10.1186/1471-2105-13-57","title":"F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks","display_name":"F2C2: a fast tool for the computation of flux coupling in genome-scale metabolic networks","publication_year":2012,"publication_date":"2012-04-23","ids":{"openalex":"https://openalex.org/W2017986168","doi":"https://doi.org/10.1186/1471-2105-13-57","mag":"2017986168","pmid":"https://pubmed.ncbi.nlm.nih.gov/22524245"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-57","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-57","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-57","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-57","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041552051","display_name":"Abdelhalim Larhlimi","orcid":"https://orcid.org/0000-0002-1709-2648"},"institutions":[{"id":"https://openalex.org/I4210105972","display_name":"Max Planck Institute of Molecular Plant Physiology","ror":"https://ror.org/01fbde567","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210105972"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Abdelhalim Larhlimi","raw_affiliation_strings":["Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Str, 24-25, D-14476 Potsdam, Germany. Larhlimi@mpimp-golm.mpg.de","Max-Planck Institute for Molecular Plant Physiology, Potsdam, Germany","Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Str, 24-25, D-14476 Potsdam, Germany. Larhlimi@mpimp-golm.mpg.de","institution_ids":["https://openalex.org/I176453806"]},{"raw_affiliation_string":"Max-Planck Institute for Molecular Plant Physiology, Potsdam, Germany","institution_ids":["https://openalex.org/I4210105972"]},{"raw_affiliation_string":"Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany","institution_ids":["https://openalex.org/I176453806"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080287471","display_name":"L\u00e1szl\u00f3 D\u00e1vid","orcid":null},"institutions":[{"id":"https://openalex.org/I2802442800","display_name":"Deutsches Forschungsnetz","ror":"https://ror.org/038t94116","country_code":"DE","type":"facility","lineage":["https://openalex.org/I2802442800"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I2800345347","display_name":"Berlin Mathematical School","ror":"https://ror.org/03zekj455","country_code":"DE","type":"education","lineage":["https://openalex.org/I2800345347"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Laszlo David","raw_affiliation_strings":["Berlin Mathematical School (BMS), Arnimallee 6, D-14195, Berlin, Germany","DFG-Research Center Matheon, Arnimallee 6, D-14195, Berlin, Germany","FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Arnimallee 6, D-14195, Berlin, Germany","FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Berlin, Germany","Berlin Mathematical School (BMS), Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Berlin Mathematical School (BMS), Arnimallee 6, D-14195, Berlin, Germany","institution_ids":["https://openalex.org/I2800345347"]},{"raw_affiliation_string":"DFG-Research Center Matheon, Arnimallee 6, D-14195, Berlin, Germany","institution_ids":["https://openalex.org/I2802442800"]},{"raw_affiliation_string":"FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Arnimallee 6, D-14195, Berlin, Germany","institution_ids":["https://openalex.org/I75951250"]},{"raw_affiliation_string":"FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Berlin, Germany","institution_ids":["https://openalex.org/I75951250"]},{"raw_affiliation_string":"Berlin Mathematical School (BMS), Berlin, Germany","institution_ids":["https://openalex.org/I2800345347"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034181383","display_name":"Joachim Selbig","orcid":null},"institutions":[{"id":"https://openalex.org/I4210105972","display_name":"Max Planck Institute of Molecular Plant Physiology","ror":"https://ror.org/01fbde567","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210105972"]},{"id":"https://openalex.org/I176453806","display_name":"University of Potsdam","ror":"https://ror.org/03bnmw459","country_code":"DE","type":"education","lineage":["https://openalex.org/I176453806"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Joachim Selbig","raw_affiliation_strings":["Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Str. 24-25, D-14476, Potsdam, Germany","Max-Planck Institute for Molecular Plant Physiology, Am M\u00fchlenberg 1, D-14476, Potsdam, Germany","Max-Planck Institute for Molecular Plant Physiology, Potsdam, Germany","Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Karl-Liebknecht-Str. 24-25, D-14476, Potsdam, Germany","institution_ids":["https://openalex.org/I176453806"]},{"raw_affiliation_string":"Max-Planck Institute for Molecular Plant Physiology, Am M\u00fchlenberg 1, D-14476, Potsdam, Germany","institution_ids":["https://openalex.org/I4210105972"]},{"raw_affiliation_string":"Max-Planck Institute for Molecular Plant Physiology, Potsdam, Germany","institution_ids":["https://openalex.org/I4210105972"]},{"raw_affiliation_string":"Department of Bioinformatics, Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany","institution_ids":["https://openalex.org/I176453806"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029211247","display_name":"Alexander Bockmayr","orcid":"https://orcid.org/0000-0002-5074-1347"},"institutions":[{"id":"https://openalex.org/I2802442800","display_name":"Deutsches Forschungsnetz","ror":"https://ror.org/038t94116","country_code":"DE","type":"facility","lineage":["https://openalex.org/I2802442800"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander Bockmayr","raw_affiliation_strings":["DFG-Research Center Matheon, Arnimallee 6, D-14195, Berlin, Germany","FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Arnimallee 6, D-14195, Berlin, Germany","FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"DFG-Research Center Matheon, Arnimallee 6, D-14195, Berlin, Germany","institution_ids":["https://openalex.org/I2802442800"]},{"raw_affiliation_string":"FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Arnimallee 6, D-14195, Berlin, Germany","institution_ids":["https://openalex.org/I75951250"]},{"raw_affiliation_string":"FB Mathematik und Informatik, Freie Universit\u00e4t Berlin, Berlin, Germany","institution_ids":["https://openalex.org/I75951250"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5041552051"],"corresponding_institution_ids":["https://openalex.org/I176453806","https://openalex.org/I4210105972"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1267,"currency":"EUR","value_usd":1366},"fwci":2.4202,"has_fulltext":true,"cited_by_count":68,"citation_normalized_percentile":{"value":0.88894699,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"13","issue":"1","first_page":"57","last_page":"57"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10171","display_name":"Biofuel production and bioconversion","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/2204","display_name":"Biomedical Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9944999814033508,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolic-network","display_name":"Metabolic network","score":0.7931198477745056},{"id":"https://openalex.org/keywords/computation","display_name":"Computation","score":0.6777175664901733},{"id":"https://openalex.org/keywords/flux-balance-analysis","display_name":"Flux balance analysis","score":0.635706901550293},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5953689813613892},{"id":"https://openalex.org/keywords/coupling","display_name":"Coupling (piping)","score":0.5886774063110352},{"id":"https://openalex.org/keywords/flux","display_name":"Flux (metallurgy)","score":0.5723183155059814},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5556426644325256},{"id":"https://openalex.org/keywords/constraint","display_name":"Constraint (computer-aided design)","score":0.5085819959640503},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4907782971858978},{"id":"https://openalex.org/keywords/scale","display_name":"Scale (ratio)","score":0.45790883898735046},{"id":"https://openalex.org/keywords/metabolic-flux-analysis","display_name":"Metabolic flux analysis","score":0.4315909743309021},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3768239915370941},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2749633193016052},{"id":"https://openalex.org/keywords/physics","display_name":"Physics","score":0.18854421377182007},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17359337210655212},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14901873469352722},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.14892366528511047},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.1285558044910431},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.11745879054069519},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10093683004379272}],"concepts":[{"id":"https://openalex.org/C101810790","wikidata":"https://www.wikidata.org/wiki/Q2263094","display_name":"Metabolic network","level":2,"score":0.7931198477745056},{"id":"https://openalex.org/C45374587","wikidata":"https://www.wikidata.org/wiki/Q12525525","display_name":"Computation","level":2,"score":0.6777175664901733},{"id":"https://openalex.org/C167091322","wikidata":"https://www.wikidata.org/wiki/Q5463029","display_name":"Flux balance analysis","level":2,"score":0.635706901550293},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5953689813613892},{"id":"https://openalex.org/C131584629","wikidata":"https://www.wikidata.org/wiki/Q4308705","display_name":"Coupling (piping)","level":2,"score":0.5886774063110352},{"id":"https://openalex.org/C68709404","wikidata":"https://www.wikidata.org/wiki/Q1134475","display_name":"Flux (metallurgy)","level":2,"score":0.5723183155059814},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5556426644325256},{"id":"https://openalex.org/C2776036281","wikidata":"https://www.wikidata.org/wiki/Q48769818","display_name":"Constraint (computer-aided design)","level":2,"score":0.5085819959640503},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4907782971858978},{"id":"https://openalex.org/C2778755073","wikidata":"https://www.wikidata.org/wiki/Q10858537","display_name":"Scale (ratio)","level":2,"score":0.45790883898735046},{"id":"https://openalex.org/C160941953","wikidata":"https://www.wikidata.org/wiki/Q6822342","display_name":"Metabolic flux analysis","level":3,"score":0.4315909743309021},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3768239915370941},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2749633193016052},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.18854421377182007},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17359337210655212},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14901873469352722},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.14892366528511047},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.1285558044910431},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.11745879054069519},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10093683004379272},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C178790620","wikidata":"https://www.wikidata.org/wiki/Q11351","display_name":"Organic chemistry","level":1,"score":0.0},{"id":"https://openalex.org/C62231903","wikidata":"https://www.wikidata.org/wiki/Q1057","display_name":"Metabolism","level":2,"score":0.0},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C134018914","wikidata":"https://www.wikidata.org/wiki/Q162606","display_name":"Endocrinology","level":1,"score":0.0},{"id":"https://openalex.org/C78519656","wikidata":"https://www.wikidata.org/wiki/Q101333","display_name":"Mechanical engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-13-57","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-57","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-57","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22524245","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22524245","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:e200f910a4c64aa5b59faba667a9b633","is_oa":true,"landing_page_url":"https://doaj.org/article/e200f910a4c64aa5b59faba667a9b633","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 57 (2012)","raw_type":"article"},{"id":"pmh:oai:kobv.de-opus4-uni-potsdam:35960","is_oa":false,"landing_page_url":"https://publishup.uni-potsdam.de/frontdoor/index/index/docId/35960","pdf_url":null,"source":{"id":"https://openalex.org/S4306400594","display_name":"publish.UP (University of Potsdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I176453806","host_organization_name":"University of Potsdam","host_organization_lineage":["https://openalex.org/I176453806"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3515416","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3515416","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_1814455","is_oa":true,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0014-1F3F-A","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bmc Bioinformatics","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-57","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-57","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-57","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4699999988079071,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2017986168.pdf","grobid_xml":"https://content.openalex.org/works/W2017986168.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1496146011","https://openalex.org/W1568225005","https://openalex.org/W1592257313","https://openalex.org/W1607883804","https://openalex.org/W1621975707","https://openalex.org/W1963547452","https://openalex.org/W1964491374","https://openalex.org/W1972740086","https://openalex.org/W1996529795","https://openalex.org/W2004568504","https://openalex.org/W2006672203","https://openalex.org/W2010707723","https://openalex.org/W2022012525","https://openalex.org/W2026089579","https://openalex.org/W2032336323","https://openalex.org/W2037614307","https://openalex.org/W2048214825","https://openalex.org/W2059546521","https://openalex.org/W2065669781","https://openalex.org/W2072708674","https://openalex.org/W2073612090","https://openalex.org/W2079887451","https://openalex.org/W2091793452","https://openalex.org/W2096245011","https://openalex.org/W2102164505","https://openalex.org/W2104108767","https://openalex.org/W2106576546","https://openalex.org/W2117228314","https://openalex.org/W2124737787","https://openalex.org/W2133809942","https://openalex.org/W2141181138","https://openalex.org/W2142747156","https://openalex.org/W2147472054","https://openalex.org/W2153611354","https://openalex.org/W2157635835","https://openalex.org/W2163855763","https://openalex.org/W2164721288","https://openalex.org/W2170427655","https://openalex.org/W2170576111","https://openalex.org/W4301808069"],"related_works":["https://openalex.org/W2113329733","https://openalex.org/W1999460937","https://openalex.org/W2133150343","https://openalex.org/W2341681417","https://openalex.org/W1984242440","https://openalex.org/W1983989854","https://openalex.org/W2070388085","https://openalex.org/W2164290927","https://openalex.org/W2047334633","https://openalex.org/W2350881169"],"abstract_inverted_index":{"We":[0],"propose":[1],"F2C2":[2,17],"as":[3],"a":[4],"fast":[5],"tool":[6],"for":[7,21],"the":[8],"computation":[9],"of":[10],"flux":[11],"coupling":[12],"in":[13],"genome-scale":[14],"metabolic":[15],"networks.":[16],"is":[18],"freely":[19],"available":[20],"non-commercial":[22],"use":[23],"at":[24],"https://sourceforge.net/projects/f2c2/files/.":[25]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
