{"id":"https://openalex.org/W2170134016","doi":"https://doi.org/10.1186/1471-2105-13-335","title":"Unlocking the potential of publicly available microarray data using inSilicoDb and inSilicoMerging R/Bioconductor packages","display_name":"Unlocking the potential of publicly available microarray data using inSilicoDb and inSilicoMerging R/Bioconductor packages","publication_year":2012,"publication_date":"2012-12-01","ids":{"openalex":"https://openalex.org/W2170134016","doi":"https://doi.org/10.1186/1471-2105-13-335","mag":"2170134016","pmid":"https://pubmed.ncbi.nlm.nih.gov/23259851"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-335","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-335","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-335","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-335","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013075716","display_name":"Jonatan Taminau","orcid":"https://orcid.org/0000-0002-4907-3994"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":true,"raw_author_name":"Jonatan Taminau","raw_affiliation_strings":["AI (CoMo), Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium. jtaminau@vub.ac.be","AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium"],"affiliations":[{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, Pleinlaan 2, 1050 Brussels, Belgium. jtaminau@vub.ac.be","institution_ids":["https://openalex.org/I13469542"]},{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067616468","display_name":"Stijn Meganck","orcid":"https://orcid.org/0000-0002-9195-7603"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Stijn Meganck","raw_affiliation_strings":["AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium"],"affiliations":[{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027449898","display_name":"Cosmin Lazar","orcid":"https://orcid.org/0000-0001-8287-717X"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Cosmin Lazar","raw_affiliation_strings":["AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium"],"affiliations":[{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072530844","display_name":"David Steenhoff","orcid":null},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"David Steenhoff","raw_affiliation_strings":["AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium"],"affiliations":[{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040151748","display_name":"Alain Coletta","orcid":null},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Alain Coletta","raw_affiliation_strings":["IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033936531","display_name":"Colin Molter","orcid":null},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Colin Molter","raw_affiliation_strings":["IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005633157","display_name":"Robin Duqu\u00e9","orcid":null},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Robin Duque","raw_affiliation_strings":["IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083182095","display_name":"Virginie de Schaetzen","orcid":null},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Virginie de Schaetzen","raw_affiliation_strings":["AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium"],"affiliations":[{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium","institution_ids":["https://openalex.org/I13469542"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030327001","display_name":"David Sol\u00eds","orcid":"https://orcid.org/0000-0002-9431-2720"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"David Y Weiss Sol\u00eds","raw_affiliation_strings":["IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032019511","display_name":"Hugues Bersini","orcid":"https://orcid.org/0000-0001-5820-7360"},"institutions":[{"id":"https://openalex.org/I132053463","display_name":"Universit\u00e9 Libre de Bruxelles","ror":"https://ror.org/01r9htc13","country_code":"BE","type":"education","lineage":["https://openalex.org/I132053463"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Hugues Bersini","raw_affiliation_strings":["IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"IRIDIA, Universit\u00e9 Libre de Bruxelles, Avenue F. D. Roosevelt 50, 1050, Brussels, Belgium","institution_ids":["https://openalex.org/I132053463"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064553018","display_name":"Ann Now\u00e9","orcid":"https://orcid.org/0000-0001-6346-4564"},"institutions":[{"id":"https://openalex.org/I13469542","display_name":"Vrije Universiteit Brussel","ror":"https://ror.org/006e5kg04","country_code":"BE","type":"education","lineage":["https://openalex.org/I13469542"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Ann Now\u00e9","raw_affiliation_strings":["AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium"],"affiliations":[{"raw_affiliation_string":"AI (CoMo), Vrije Universiteit Brussel, 1050, Brussels, Pleinlaan 2, Belgium","institution_ids":["https://openalex.org/I13469542"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5013075716"],"corresponding_institution_ids":["https://openalex.org/I13469542"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.2857,"has_fulltext":true,"cited_by_count":239,"citation_normalized_percentile":{"value":0.88642306,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"13","issue":"1","first_page":"335","last_page":"335"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9911999702453613,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bioconductor","display_name":"Bioconductor","score":0.9748009443283081},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7053759098052979},{"id":"https://openalex.org/keywords/bottleneck","display_name":"Bottleneck","score":0.6213806867599487},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5953484773635864},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5702245235443115},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.5511391758918762},{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.5083946585655212},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.482991099357605},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.45145663619041443},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4395048916339874},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.42963922023773193},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.33033934235572815},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12954387068748474},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11807757616043091},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09245321154594421},{"id":"https://openalex.org/keywords/embedded-system","display_name":"Embedded system","score":0.08842897415161133},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.08327057957649231}],"concepts":[{"id":"https://openalex.org/C2779694297","wikidata":"https://www.wikidata.org/wiki/Q2888953","display_name":"Bioconductor","level":3,"score":0.9748009443283081},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7053759098052979},{"id":"https://openalex.org/C2780513914","wikidata":"https://www.wikidata.org/wiki/Q18210350","display_name":"Bottleneck","level":2,"score":0.6213806867599487},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5953484773635864},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5702245235443115},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.5511391758918762},{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.5083946585655212},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.482991099357605},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.45145663619041443},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4395048916339874},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.42963922023773193},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.33033934235572815},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12954387068748474},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11807757616043091},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09245321154594421},{"id":"https://openalex.org/C149635348","wikidata":"https://www.wikidata.org/wiki/Q193040","display_name":"Embedded system","level":1,"score":0.08842897415161133},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.08327057957649231},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C459310","wikidata":"https://www.wikidata.org/wiki/Q117801","display_name":"Computational science","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D022126","descriptor_name":"Access to Information","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-13-335","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-335","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-335","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23259851","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23259851","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:dipot.ulb.ac.be:2013/189752","is_oa":true,"landing_page_url":"http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/189752","pdf_url":null,"source":{"id":"https://openalex.org/S4306401063","display_name":"D\u00e9p\u00f4t institutionnel de l'Universit\u00e9 libre de Bruxelles (Universit\u00e9 Libre de Bruxelles)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132053463","host_organization_name":"Universit\u00e9 Libre de Bruxelles","host_organization_lineage":["https://openalex.org/I132053463"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC bioinformatics, 13 (1","raw_type":"info:ulb-repo/semantics/openurl/article"},{"id":"pmh:oai:doaj.org/article:506321dc462b4db0a844505b4bdb8bdb","is_oa":true,"landing_page_url":"https://doaj.org/article/506321dc462b4db0a844505b4bdb8bdb","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 335 (2012)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2569409","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3568420","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:vubissmart:VUBISSMART:2000:186607","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306402573","display_name":"VUBIR (Vrije Universiteit Brussel)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I13469542","host_organization_name":"Vrije Universiteit Brussel","host_organization_lineage":["https://openalex.org/I13469542"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-335","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-335","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-335","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322852","display_name":"Innoviris","ror":"https://ror.org/04af9zr29"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2170134016.pdf","grobid_xml":"https://content.openalex.org/works/W2170134016.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W1544285048","https://openalex.org/W1590624824","https://openalex.org/W1968525781","https://openalex.org/W1986008049","https://openalex.org/W2015332744","https://openalex.org/W2020541351","https://openalex.org/W2024858956","https://openalex.org/W2086835855","https://openalex.org/W2094678200","https://openalex.org/W2096192437","https://openalex.org/W2099079147","https://openalex.org/W2100239923","https://openalex.org/W2103964110","https://openalex.org/W2107012657","https://openalex.org/W2107665951","https://openalex.org/W2108269876","https://openalex.org/W2113878188","https://openalex.org/W2116146003","https://openalex.org/W2118020555","https://openalex.org/W2132960606","https://openalex.org/W2134787419","https://openalex.org/W2139345901","https://openalex.org/W2143290174","https://openalex.org/W2147013674","https://openalex.org/W2150542002","https://openalex.org/W2160697532","https://openalex.org/W2168113705","https://openalex.org/W2506717766"],"related_works":["https://openalex.org/W2982252354","https://openalex.org/W2005263238","https://openalex.org/W142111944","https://openalex.org/W2149532639","https://openalex.org/W2594878638","https://openalex.org/W2056932428","https://openalex.org/W3023720143","https://openalex.org/W2490137852","https://openalex.org/W1483316219","https://openalex.org/W2412120523"],"abstract_inverted_index":{"By":[0],"providing":[1],"(i)":[2],"access":[3],"to":[4,15,42],"uniformly":[5],"curated":[6],"and":[7,26,66],"preprocessed":[8],"data,":[9],"(ii)":[10],"a":[11],"collection":[12],"of":[13,34,47,57],"techniques":[14],"remove":[16],"the":[17,32,35,45,72],"batch":[18],"effects":[19],"between":[20],"data":[21,51],"sets":[22],"from":[23,71],"different":[24],"sources,":[25],"(iii)":[27],"several":[28],"validation":[29],"tools":[30],"enabling":[31],"inspection":[33],"integration":[36],"process,":[37],"these":[38],"packages":[39,60],"enable":[40],"researchers":[41],"fully":[43],"explore":[44],"potential":[46],"combining":[48],"gene":[49,68],"expression":[50,69],"for":[52],"downstream":[53],"analysis.":[54],"The":[55],"power":[56],"using":[58],"both":[59],"is":[61],"demonstrated":[62],"by":[63],"programmatically":[64],"retrieving":[65],"integrating":[67],"studies":[70],"InSilico":[73],"DB":[74],"repository":[75],"[https://insilicodb.org/app/].":[76]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":35},{"year":2024,"cited_by_count":33},{"year":2023,"cited_by_count":61},{"year":2022,"cited_by_count":33},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":8},{"year":2017,"cited_by_count":15},{"year":2016,"cited_by_count":9},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":2}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
