{"id":"https://openalex.org/W2128947262","doi":"https://doi.org/10.1186/1471-2105-13-322","title":"Finding quasi-modules of human and viral miRNAs: a case study of human cytomegalovirus (HCMV)","display_name":"Finding quasi-modules of human and viral miRNAs: a case study of human cytomegalovirus (HCMV)","publication_year":2012,"publication_date":"2012-12-01","ids":{"openalex":"https://openalex.org/W2128947262","doi":"https://doi.org/10.1186/1471-2105-13-322","mag":"2128947262","pmid":"https://pubmed.ncbi.nlm.nih.gov/23206407"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-322","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-322","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-322","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-322","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062614879","display_name":"Isana Veksler\u2010Lublinsky","orcid":"https://orcid.org/0000-0002-4251-6158"},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Isana Veksler-Lublinsky","raw_affiliation_strings":["Department of Computer Science, Ben-Gurion University, Beer-Sheva 84105, Israel","Department of Computer Science, Ben Gurion University, Beer Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Ben-Gurion University, Beer-Sheva 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Department of Computer Science, Ben Gurion University, Beer Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056892922","display_name":"Yonat Shemer\u2010Avni","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Yonat Shemer-Avni","raw_affiliation_strings":["Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, 84105, Israel","Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040126994","display_name":"Eti Meiri","orcid":null},"institutions":[{"id":"https://openalex.org/I99840328","display_name":"Rosetta Genomics (Israel)","ror":"https://ror.org/044xepv65","country_code":"IL","type":"company","lineage":["https://openalex.org/I99840328"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Eti Meiri","raw_affiliation_strings":["Rosetta Genomics Ltd., 10 Plaut St., Rehovot, 76706, Israel","Rehovot, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Rosetta Genomics Ltd., 10 Plaut St., Rehovot, 76706, Israel","institution_ids":["https://openalex.org/I99840328"]},{"raw_affiliation_string":"Rehovot, Israel","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026115410","display_name":"Zvi Bentwich","orcid":"https://orcid.org/0000-0002-9121-2310"},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Zvi Bentwich","raw_affiliation_strings":["Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, 84105, Israel","Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033593347","display_name":"Klara Kedem","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Klara Kedem","raw_affiliation_strings":["Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","Department of Computer Science, Ben Gurion University, Beer Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Department of Computer Science, Ben Gurion University, Beer Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048383219","display_name":"Michal Ziv-Ukelson","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Michal Ziv-Ukelson","raw_affiliation_strings":["Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","Department of Computer Science, Ben Gurion University, Beer Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Department of Computer Science, Ben Gurion University, Beer Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5048383219"],"corresponding_institution_ids":["https://openalex.org/I124227911"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":0.1997,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.58005998,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"13","issue":"1","first_page":"322","last_page":"322"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9555000066757202,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9555000066757202,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10725","display_name":"RNA Interference and Gene Delivery","score":0.0034000000450760126,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11765","display_name":"Circular RNAs in diseases","score":0.003000000026077032,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/human-cytomegalovirus","display_name":"Human cytomegalovirus","score":0.9383032321929932},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.6541863679885864},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6326942443847656},{"id":"https://openalex.org/keywords/cytomegalovirus","display_name":"Cytomegalovirus","score":0.6113971471786499},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.606104850769043},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5254637002944946},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5139076709747314},{"id":"https://openalex.org/keywords/human-herpesvirus","display_name":"Human herpesvirus","score":0.4381474554538727},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.32085371017456055},{"id":"https://openalex.org/keywords/herpesviridae","display_name":"Herpesviridae","score":0.29840534925460815},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2899492084980011},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.25394248962402344},{"id":"https://openalex.org/keywords/viral-disease","display_name":"Viral disease","score":0.21056696772575378},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.20150262117385864}],"concepts":[{"id":"https://openalex.org/C2779820661","wikidata":"https://www.wikidata.org/wiki/Q6929","display_name":"Human cytomegalovirus","level":3,"score":0.9383032321929932},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.6541863679885864},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6326942443847656},{"id":"https://openalex.org/C2777732132","wikidata":"https://www.wikidata.org/wiki/Q6946","display_name":"Cytomegalovirus","level":5,"score":0.6113971471786499},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.606104850769043},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5254637002944946},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5139076709747314},{"id":"https://openalex.org/C3018958071","wikidata":"https://www.wikidata.org/wiki/Q149348","display_name":"Human herpesvirus","level":3,"score":0.4381474554538727},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32085371017456055},{"id":"https://openalex.org/C2776409557","wikidata":"https://www.wikidata.org/wiki/Q149348","display_name":"Herpesviridae","level":4,"score":0.29840534925460815},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2899492084980011},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.25394248962402344},{"id":"https://openalex.org/C2780727368","wikidata":"https://www.wikidata.org/wiki/Q1928978","display_name":"Viral disease","level":3,"score":0.21056696772575378},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.20150262117385864}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003587","descriptor_name":"Cytomegalovirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003587","descriptor_name":"Cytomegalovirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003587","descriptor_name":"Cytomegalovirus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003587","descriptor_name":"Cytomegalovirus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D003587","descriptor_name":"Cytomegalovirus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D003587","descriptor_name":"Cytomegalovirus","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015536","descriptor_name":"Down-Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015536","descriptor_name":"Down-Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015536","descriptor_name":"Down-Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-13-322","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-322","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-322","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:23206407","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23206407","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2603527","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3598692","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-322","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-322","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-322","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8781765776","display_name":null,"funder_award_id":"478/10","funder_id":"https://openalex.org/F4320322252","funder_display_name":"Israel Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320322252","display_name":"Israel Science Foundation","ror":"https://ror.org/04sazxf24"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2128947262.pdf","grobid_xml":"https://content.openalex.org/works/W2128947262.grobid-xml"},"referenced_works_count":73,"referenced_works":["https://openalex.org/W99207100","https://openalex.org/W1481189688","https://openalex.org/W1820258609","https://openalex.org/W1969192912","https://openalex.org/W1969354039","https://openalex.org/W1971980067","https://openalex.org/W1972785590","https://openalex.org/W1975131084","https://openalex.org/W1976077409","https://openalex.org/W1981135146","https://openalex.org/W1989752867","https://openalex.org/W1995424720","https://openalex.org/W1996549514","https://openalex.org/W1997048521","https://openalex.org/W2007471874","https://openalex.org/W2015018301","https://openalex.org/W2016883314","https://openalex.org/W2026520054","https://openalex.org/W2029771300","https://openalex.org/W2031241949","https://openalex.org/W2031670246","https://openalex.org/W2032766715","https://openalex.org/W2040191060","https://openalex.org/W2048158327","https://openalex.org/W2048750217","https://openalex.org/W2053835153","https://openalex.org/W2060468039","https://openalex.org/W2063317473","https://openalex.org/W2063636582","https://openalex.org/W2063825866","https://openalex.org/W2064890413","https://openalex.org/W2070765029","https://openalex.org/W2074815090","https://openalex.org/W2076787553","https://openalex.org/W2080426618","https://openalex.org/W2081076969","https://openalex.org/W2081566793","https://openalex.org/W2086848163","https://openalex.org/W2089058789","https://openalex.org/W2090975474","https://openalex.org/W2103983395","https://openalex.org/W2108668859","https://openalex.org/W2109875713","https://openalex.org/W2114132281","https://openalex.org/W2115503551","https://openalex.org/W2117092553","https://openalex.org/W2117124710","https://openalex.org/W2117813664","https://openalex.org/W2117877312","https://openalex.org/W2120210602","https://openalex.org/W2120456037","https://openalex.org/W2121096707","https://openalex.org/W2125058717","https://openalex.org/W2125879257","https://openalex.org/W2132507383","https://openalex.org/W2133742009","https://openalex.org/W2137881107","https://openalex.org/W2139823039","https://openalex.org/W2140436032","https://openalex.org/W2142798790","https://openalex.org/W2143493524","https://openalex.org/W2144544802","https://openalex.org/W2144789797","https://openalex.org/W2146171942","https://openalex.org/W2150361201","https://openalex.org/W2153195747","https://openalex.org/W2156375236","https://openalex.org/W2157754963","https://openalex.org/W2162674813","https://openalex.org/W2162826156","https://openalex.org/W2166540695","https://openalex.org/W4254867250","https://openalex.org/W4255061622"],"related_works":["https://openalex.org/W1975816210","https://openalex.org/W3151653674","https://openalex.org/W2314067941","https://openalex.org/W2737319532","https://openalex.org/W2116161740","https://openalex.org/W4247128323","https://openalex.org/W2289321543","https://openalex.org/W3115487314","https://openalex.org/W2108646699","https://openalex.org/W2152170868"],"abstract_inverted_index":{"BACKGROUND:":[0],"MicroRNAs":[1],"(miRNAs)":[2],"are":[3,91,122],"important":[4],"regulators":[5],"of":[6,13,20,22,94,111,146,171,195,198],"gene":[7,62],"expression":[8,162],"encoded":[9],"by":[10,66,129,188],"a":[11,49,138,158],"variety":[12],"organisms,":[14],"including":[15],"viruses.":[16],"Although":[17],"the":[18,23,40,108,172,193,196,204],"function":[19],"most":[21],"viral":[24,34,71,86,126,147],"miRNAs":[25,37,47,74,89,121,127,150,199],"is":[26,30,182],"currently":[27],"unknown,":[28],"there":[29,90],"evidence":[31,84,176],"that":[32],"both":[33],"and":[35,44,60,72,87,99,125,148,151,156,166,179,203],"host":[36,73,88,120,149,160],"contribute":[38],"to":[39],"interactions":[41],"between":[42],"viruses":[43],"their":[45,131,152],"hosts.":[46],"constitute":[48],"complex":[50],"combinatorial":[51],"network,":[52],"where":[53],"one":[54,61],"miRNA":[55,161],"may":[56,63,75,191,209],"target":[57,79,154],"many":[58],"genes":[59,205],"be":[64],"targeted":[65],"multiple":[67],"miRNAs.":[68],"In":[69,103],"particular,":[70],"also":[76],"have":[77],"mutual":[78,95,112,153],"genes.":[80],"Based":[81],"on":[82],"published":[83],"linking":[85],"three":[92],"modes":[93],"regulation:":[96],"competing,":[97],"cooperating,":[98],"compensating":[100,109],"modes.":[101],"RESULTS:":[102],"this":[104],"paper":[105],"we":[106,136],"explore":[107],"mode":[110],"regulation":[113],"upon":[114],"Human":[115],"Cytomegalovirus":[116],"(HCMV)":[117],"infection,":[118],"when":[119],"down":[123],"regulated":[124],"compensate":[128],"mimicking":[130],"function.":[132],"To":[133],"achieve":[134],"this,":[135],"develop":[137],"new":[139,159],"algorithm":[140],"which":[141],"finds":[142],"groups,":[143],"called":[144],"quasi-modules,":[145,174],"genes,":[155],"use":[157],"data":[163],"for":[164,213],"HCMV-infected":[165],"uninfected":[167],"cells.":[168],"For":[169],"two":[170],"reported":[173],"supporting":[175],"from":[177],"biological":[178],"medical":[180],"literature":[181],"provided.":[183],"CONCLUSIONS:":[184],"The":[185],"modules":[186,208],"found":[187],"our":[189],"method":[190],"advance":[192],"understanding":[194],"role":[197],"in":[200,206],"host-viral":[201],"interactions,":[202],"these":[207],"serve":[210],"as":[211],"candidates":[212],"further":[214],"experimental":[215],"validation.":[216]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":1}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
