{"id":"https://openalex.org/W2043513648","doi":"https://doi.org/10.1186/1471-2105-13-175","title":"Seqcrawler: biological data indexing and browsing platform","display_name":"Seqcrawler: biological data indexing and browsing platform","publication_year":2012,"publication_date":"2012-07-24","ids":{"openalex":"https://openalex.org/W2043513648","doi":"https://doi.org/10.1186/1471-2105-13-175","mag":"2043513648","pmid":"https://pubmed.ncbi.nlm.nih.gov/22827839"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-175","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-175","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-175","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-175","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5083778633","display_name":"Olivier Sallou","orcid":"https://orcid.org/0000-0003-3561-5657"},"institutions":[{"id":"https://openalex.org/I56067802","display_name":"Universit\u00e9 de Rennes","ror":"https://ror.org/015m7wh34","country_code":"FR","type":"education","lineage":["https://openalex.org/I56067802"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Olivier Sallou","raw_affiliation_strings":["Campus de Beaulieu, University of Rennes 1, Rennes, France. olivier.sallou@irisa.fr","Campus de Beaulieu, University of Rennes 1, Rennes, France"],"affiliations":[{"raw_affiliation_string":"Campus de Beaulieu, University of Rennes 1, Rennes, France. olivier.sallou@irisa.fr","institution_ids":["https://openalex.org/I56067802"]},{"raw_affiliation_string":"Campus de Beaulieu, University of Rennes 1, Rennes, France","institution_ids":["https://openalex.org/I56067802"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003706908","display_name":"Anthony Bretaudeau","orcid":"https://orcid.org/0000-0003-0914-2470"},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Anthony Bretaudeau","raw_affiliation_strings":["INRIA, Campus de Beaulieu, Rennes, France","[Inria Campus de Beaulieu, Rennes, France]"],"affiliations":[{"raw_affiliation_string":"INRIA, Campus de Beaulieu, Rennes, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"[Inria Campus de Beaulieu, Rennes, France]","institution_ids":["https://openalex.org/I1326498283"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5069674809","display_name":"Aur\u00e9lien Roult","orcid":null},"institutions":[{"id":"https://openalex.org/I1326498283","display_name":"Institut national de recherche en informatique et en automatique","ror":"https://ror.org/02kvxyf05","country_code":"FR","type":"funder","lineage":["https://openalex.org/I1326498283"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Aurelien Roult","raw_affiliation_strings":["INRIA, Campus de Beaulieu, Rennes, France","[Inria Campus de Beaulieu, Rennes, France]"],"affiliations":[{"raw_affiliation_string":"INRIA, Campus de Beaulieu, Rennes, France","institution_ids":["https://openalex.org/I1326498283"]},{"raw_affiliation_string":"[Inria Campus de Beaulieu, Rennes, France]","institution_ids":["https://openalex.org/I1326498283"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5083778633"],"corresponding_institution_ids":["https://openalex.org/I56067802"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.0,"has_fulltext":true,"cited_by_count":0,"citation_normalized_percentile":{"value":0.08912645,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":null,"biblio":{"volume":"13","issue":"1","first_page":"175","last_page":"175"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9941999912261963,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7724325656890869},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.6665167212486267},{"id":"https://openalex.org/keywords/cloud-computing","display_name":"Cloud computing","score":0.6612451672554016},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.5453592538833618},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4945337474346161},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4530111253261566},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4521784782409668},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.43088316917419434},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.41717758774757385},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.31708812713623047},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.31272202730178833},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1849537491798401}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7724325656890869},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.6665167212486267},{"id":"https://openalex.org/C79974875","wikidata":"https://www.wikidata.org/wiki/Q483639","display_name":"Cloud computing","level":2,"score":0.6612451672554016},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.5453592538833618},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4945337474346161},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4530111253261566},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4521784782409668},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.43088316917419434},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.41717758774757385},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.31708812713623047},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.31272202730178833},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1849537491798401},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-13-175","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-175","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-175","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22827839","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22827839","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-00728279v1","is_oa":false,"landing_page_url":"https://inria.hal.science/hal-00728279","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2012, 13 (1), pp.175. ⟨10.1186/1471-2105-13-175⟩","raw_type":"Journal articles"},{"id":"pmh:oai:doaj.org/article:a161607bc93145ac9bc12a566533a0ab","is_oa":true,"landing_page_url":"https://doaj.org/article/a161607bc93145ac9bc12a566533a0ab","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 175 (2012)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3481441","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3481441","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-175","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-175","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-175","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6299999952316284,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320313934","display_name":"Institut national de recherche en informatique et en automatique (INRIA)","ror":"https://ror.org/02kvxyf05"},{"id":"https://openalex.org/F4320327215","display_name":"R\u00e9gion Bretagne","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2043513648.pdf","grobid_xml":"https://content.openalex.org/works/W2043513648.grobid-xml"},"referenced_works_count":8,"referenced_works":["https://openalex.org/W1512950721","https://openalex.org/W1730348256","https://openalex.org/W2012884498","https://openalex.org/W2106862596","https://openalex.org/W2128016314","https://openalex.org/W2147901668","https://openalex.org/W2158304452","https://openalex.org/W2161427213"],"related_works":["https://openalex.org/W2392768766","https://openalex.org/W2058118494","https://openalex.org/W2095118173","https://openalex.org/W2382021449","https://openalex.org/W2104269053","https://openalex.org/W2106424170","https://openalex.org/W2501188010","https://openalex.org/W4299935056","https://openalex.org/W2768810474","https://openalex.org/W4206575749"],"abstract_inverted_index":{"Seqcrawler":[0],"provides":[1],"a":[2,22,39,50,62],"complete":[3],"open":[4],"source":[5],"search":[6],"and":[7,24,33,41,58],"store":[8],"solution":[9,55],"for":[10],"labs":[11],"or":[12],"platforms":[13],"needing":[14],"to":[15],"manage":[16],"large":[17],"amount":[18],"of":[19],"data/meta-data":[20],"with":[21,49],"flexible":[23],"customizable":[25],"web":[26],"interface.":[27,53],"All":[28],"components":[29],"(search":[30],"engine,":[31],"visualization":[32],"data":[34,43],"storage),":[35],"though":[36],"independent,":[37],"share":[38],"common":[40],"coherent":[42],"system":[44],"that":[45],"can":[46,59],"be":[47],"queried":[48],"simple":[51],"HTTP":[52],"The":[54],"scales":[56],"easily":[57],"also":[60],"provide":[61],"high":[63],"availability":[64],"infrastructure.":[65]},"counts_by_year":[],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}