{"id":"https://openalex.org/W2018680580","doi":"https://doi.org/10.1186/1471-2105-13-119","title":"Biomine: predicting links between biological entities using network models of heterogeneous databases","display_name":"Biomine: predicting links between biological entities using network models of heterogeneous databases","publication_year":2012,"publication_date":"2012-06-06","ids":{"openalex":"https://openalex.org/W2018680580","doi":"https://doi.org/10.1186/1471-2105-13-119","mag":"2018680580","pmid":"https://pubmed.ncbi.nlm.nih.gov/22672646"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-119","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-119","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-119","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-119","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017516043","display_name":"Lauri Eronen","orcid":null},"institutions":[{"id":"https://openalex.org/I4210092558","display_name":"BC Platforms (Finland)","ror":"https://ror.org/002fen565","country_code":"FI","type":"company","lineage":["https://openalex.org/I4210092558"]}],"countries":["FI"],"is_corresponding":true,"raw_author_name":"Lauri Eronen","raw_affiliation_strings":["Biocomputing Platforms Ltd, Innopoli 2, Tekniikantie 14, , FI-02150 Espoo, Finland. lauri.eronen@cs.helsinki.fi","Biocomputing Platforms Ltd, Innopoli 2, Tekniikantie 14, FI-02150, Espoo, Finland"],"affiliations":[{"raw_affiliation_string":"Biocomputing Platforms Ltd, Innopoli 2, Tekniikantie 14, , FI-02150 Espoo, Finland. lauri.eronen@cs.helsinki.fi","institution_ids":["https://openalex.org/I4210092558"]},{"raw_affiliation_string":"Biocomputing Platforms Ltd, Innopoli 2, Tekniikantie 14, FI-02150, Espoo, Finland","institution_ids":["https://openalex.org/I4210092558"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045869840","display_name":"Hannu Toivonen","orcid":"https://orcid.org/0000-0003-1339-8022"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Hannu Toivonen","raw_affiliation_strings":["Department of Computer Science and HIIT, University of Helsinki, PO Box 68, Helsinki, FI\u201300014, Finland"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and HIIT, University of Helsinki, PO Box 68, Helsinki, FI\u201300014, Finland","institution_ids":["https://openalex.org/I133731052"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5017516043"],"corresponding_institution_ids":["https://openalex.org/I4210092558"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.3617,"has_fulltext":true,"cited_by_count":71,"citation_normalized_percentile":{"value":0.92978946,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"13","issue":"1","first_page":"119","last_page":"119"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7164621353149414},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6017263531684875},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.5452523827552795},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.5191128253936768},{"id":"https://openalex.org/keywords/gene-ontology","display_name":"Gene ontology","score":0.5010771751403809},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4992079734802246},{"id":"https://openalex.org/keywords/prioritization","display_name":"Prioritization","score":0.47728028893470764},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.44905877113342285},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.4477458596229553},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.2556319236755371},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.21250301599502563},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2085336446762085},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.20299330353736877},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1251544952392578}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7164621353149414},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6017263531684875},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.5452523827552795},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.5191128253936768},{"id":"https://openalex.org/C2987395477","wikidata":"https://www.wikidata.org/wiki/Q135085","display_name":"Gene ontology","level":4,"score":0.5010771751403809},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4992079734802246},{"id":"https://openalex.org/C2777615720","wikidata":"https://www.wikidata.org/wiki/Q11888847","display_name":"Prioritization","level":2,"score":0.47728028893470764},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.44905877113342285},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.4477458596229553},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.2556319236755371},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.21250301599502563},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2085336446762085},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.20299330353736877},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1251544952392578},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C539667460","wikidata":"https://www.wikidata.org/wiki/Q2414942","display_name":"Management science","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000075723","descriptor_name":"Kruppel-Like Factor 6","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000075723","descriptor_name":"Kruppel-Like Factor 6","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000075723","descriptor_name":"Kruppel-Like Factor 6","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011518","descriptor_name":"Proto-Oncogene Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011518","descriptor_name":"Proto-Oncogene Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011518","descriptor_name":"Proto-Oncogene Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D013274","descriptor_name":"Stomach Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019869","descriptor_name":"Phosphatidylinositol 3-Kinases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019869","descriptor_name":"Phosphatidylinositol 3-Kinases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019869","descriptor_name":"Phosphatidylinositol 3-Kinases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D051741","descriptor_name":"Kruppel-Like Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051741","descriptor_name":"Kruppel-Like Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051741","descriptor_name":"Kruppel-Like Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-13-119","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-119","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-119","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22672646","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22672646","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:helda.helsinki.fi:10138/162789","is_oa":true,"landing_page_url":"http://www.biomedcentral.com/1471-2105/13/119","pdf_url":"http://hdl.handle.net/10138/162789","source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:doaj.org/article:25b27cb3a6f045438da1da01865bfc4f","is_oa":true,"landing_page_url":"https://doaj.org/article/25b27cb3a6f045438da1da01865bfc4f","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 119 (2012)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3505483","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3505483","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-119","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-119","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-13-119","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3514550006","display_name":null,"funder_award_id":"Centre","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G4232967162","display_name":"Bisociation Networks for Creative Information Discovery","funder_award_id":"211898","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5483342299","display_name":null,"funder_award_id":"FP7-ICT","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5541357959","display_name":null,"funder_award_id":"7th Framework Programme","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G645663373","display_name":null,"funder_award_id":"7th Framework","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6577931256","display_name":null,"funder_award_id":"118653","funder_id":"https://openalex.org/F4320321108","funder_display_name":"Academy of Finland"},{"id":"https://openalex.org/G8051717526","display_name":null,"funder_award_id":"Grant","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321108","display_name":"Academy of Finland","ror":"https://ror.org/05k73zm37"},{"id":"https://openalex.org/F4320338370","display_name":"FP7 Information and Communication Technologies","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2018680580.pdf","grobid_xml":"https://content.openalex.org/works/W2018680580.grobid-xml"},"referenced_works_count":52,"referenced_works":["https://openalex.org/W61101988","https://openalex.org/W1509396824","https://openalex.org/W1588510915","https://openalex.org/W1835571316","https://openalex.org/W1994306321","https://openalex.org/W2011726136","https://openalex.org/W2014469644","https://openalex.org/W2020301095","https://openalex.org/W2033474350","https://openalex.org/W2037933327","https://openalex.org/W2038122249","https://openalex.org/W2041467022","https://openalex.org/W2056285697","https://openalex.org/W2062533676","https://openalex.org/W2070412833","https://openalex.org/W2071529189","https://openalex.org/W2078797727","https://openalex.org/W2079007492","https://openalex.org/W2084974619","https://openalex.org/W2096525273","https://openalex.org/W2097391913","https://openalex.org/W2099547895","https://openalex.org/W2100025044","https://openalex.org/W2100251770","https://openalex.org/W2103017472","https://openalex.org/W2107580398","https://openalex.org/W2110684048","https://openalex.org/W2113613985","https://openalex.org/W2116423958","https://openalex.org/W2118002992","https://openalex.org/W2119220491","https://openalex.org/W2119412782","https://openalex.org/W2123017611","https://openalex.org/W2123699903","https://openalex.org/W2130410032","https://openalex.org/W2134711219","https://openalex.org/W2137130182","https://openalex.org/W2137442080","https://openalex.org/W2149194035","https://openalex.org/W2153091158","https://openalex.org/W2157997136","https://openalex.org/W2158698691","https://openalex.org/W2158853394","https://openalex.org/W2165044720","https://openalex.org/W2166468869","https://openalex.org/W2170866859","https://openalex.org/W2171437346","https://openalex.org/W2172049947","https://openalex.org/W2772934464","https://openalex.org/W4211208250","https://openalex.org/W4232932184","https://openalex.org/W4320800138"],"related_works":["https://openalex.org/W2155492529","https://openalex.org/W4252504573","https://openalex.org/W4385510321","https://openalex.org/W2101315668","https://openalex.org/W15348386","https://openalex.org/W2307569040","https://openalex.org/W2314128295","https://openalex.org/W2366067673","https://openalex.org/W1509942269","https://openalex.org/W4287026692"],"abstract_inverted_index":{"The":[0,21],"experimental":[1],"results":[2,67],"show":[3,68],"that":[4,69],"Biomine":[5,27,73,84],"has":[6],"strong":[7],"potential":[8],"for":[9,124],"predicting":[10],"links":[11,18,47],"when":[12,43,78],"a":[13,87,116],"set":[14,59],"of":[15,40,46,60,89,110],"selected":[16],"candidate":[17],"is":[19,63,82,86],"available.":[20],"predictions":[22],"obtained":[23,35],"using":[24,36],"the":[25,52,66],"entire":[26],"dataset":[28],"are":[29,48,113],"shown":[30],"to":[31],"clearly":[32],"outperform":[33],"ones":[34],"any":[37],"single":[38],"source":[39],"data":[41],"alone,":[42],"different":[44],"types":[45],"suitably":[49],"weighted.":[50],"In":[51],"gene":[53],"prioritization":[54],"task,":[55],"an":[56],"established":[57],"reference":[58],"disease-associated":[61],"genes":[62],"useful,":[64],"but":[65],"under":[70],"favorable":[71],"conditions,":[72],"can":[74],"also":[75],"perform":[76],"well":[77],"no":[79],"such":[80],"information":[81],"available.The":[83],"system":[85],"proof":[88],"concept.":[90],"Its":[91],"current":[92],"version":[93],"contains":[94],"1.1":[95],"million":[96,100],"entities":[97],"and":[98,125],"8.1":[99],"relations":[101],"between":[102,128],"them,":[103],"with":[104],"focus":[105],"on":[106],"human":[107],"genetics.":[108],"Some":[109],"its":[111],"functionalities":[112],"available":[114],"in":[115],"public":[117],"query":[118],"interface":[119],"at":[120],"http://biomine.cs.helsinki.fi,":[121],"allowing":[122],"searching":[123],"visualizing":[126],"connections":[127],"given":[129],"biological":[130],"entities.":[131]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-15T08:11:43.952461","created_date":"2025-10-10T00:00:00"}