{"id":"https://openalex.org/W2051547811","doi":"https://doi.org/10.1186/1471-2105-13-108","title":"Extracting semantically enriched events from biomedical literature","display_name":"Extracting semantically enriched events from biomedical literature","publication_year":2012,"publication_date":"2012-05-23","ids":{"openalex":"https://openalex.org/W2051547811","doi":"https://doi.org/10.1186/1471-2105-13-108","mag":"2051547811","pmid":"https://pubmed.ncbi.nlm.nih.gov/22621266"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-13-108","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-108","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-13-108","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-13-108","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101412540","display_name":"Makoto Miwa","orcid":"https://orcid.org/0000-0002-2330-6972"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Makoto Miwa","raw_affiliation_strings":["The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, UK. makoto.miwa@manchester.ac.uk","The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK"],"affiliations":[{"raw_affiliation_string":"The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, UK. makoto.miwa@manchester.ac.uk","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100606557","display_name":"Paul M. Thompson","orcid":"https://orcid.org/0000-0002-4720-8867"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Paul Thompson","raw_affiliation_strings":["School of Computer Science and the Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, M1 7DN, UK","The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and the Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110478635","display_name":"John McNaught","orcid":null},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"John McNaught","raw_affiliation_strings":["School of Computer Science and the Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, M1 7DN, UK","The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and the Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077370611","display_name":"Douglas B. Kell","orcid":"https://orcid.org/0000-0001-5838-7963"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Douglas B Kell","raw_affiliation_strings":["School of Chemistry and the Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK"],"affiliations":[{"raw_affiliation_string":"School of Chemistry and the Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077976343","display_name":"Sophia Ananiadou","orcid":"https://orcid.org/0000-0002-4097-9191"},"institutions":[{"id":"https://openalex.org/I28407311","display_name":"University of Manchester","ror":"https://ror.org/027m9bs27","country_code":"GB","type":"education","lineage":["https://openalex.org/I28407311"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Sophia Ananiadou","raw_affiliation_strings":["School of Computer Science and the Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, M1 7DN, UK","The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK"],"affiliations":[{"raw_affiliation_string":"School of Computer Science and the Manchester Interdisciplinary Biocentre, University of Manchester, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]},{"raw_affiliation_string":"The National Centre for Text Mining, Manchester Interdisciplinary Biocentre, University of Manchester, 131 Princess Street, Manchester, M1 7DN, UK","institution_ids":["https://openalex.org/I28407311"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101412540"],"corresponding_institution_ids":["https://openalex.org/I28407311"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":4.1683,"has_fulltext":true,"cited_by_count":69,"citation_normalized_percentile":{"value":0.9496153,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"13","issue":"1","first_page":"108","last_page":"108"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9861999750137329,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8448103070259094},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.7461268901824951},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.6408998966217041},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6407899856567383},{"id":"https://openalex.org/keywords/event","display_name":"Event (particle physics)","score":0.636279821395874},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5916868448257446},{"id":"https://openalex.org/keywords/automatic-summarization","display_name":"Automatic summarization","score":0.574805736541748},{"id":"https://openalex.org/keywords/information-extraction","display_name":"Information extraction","score":0.5238247513771057},{"id":"https://openalex.org/keywords/sentence","display_name":"Sentence","score":0.5144177079200745},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.5042413473129272},{"id":"https://openalex.org/keywords/popularity","display_name":"Popularity","score":0.4556856155395508},{"id":"https://openalex.org/keywords/f1-score","display_name":"F1 score","score":0.4301866292953491},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.41780492663383484},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.3805910348892212}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8448103070259094},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.7461268901824951},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.6408998966217041},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6407899856567383},{"id":"https://openalex.org/C2779662365","wikidata":"https://www.wikidata.org/wiki/Q5416694","display_name":"Event (particle physics)","level":2,"score":0.636279821395874},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5916868448257446},{"id":"https://openalex.org/C170858558","wikidata":"https://www.wikidata.org/wiki/Q1394144","display_name":"Automatic summarization","level":2,"score":0.574805736541748},{"id":"https://openalex.org/C195807954","wikidata":"https://www.wikidata.org/wiki/Q1662562","display_name":"Information extraction","level":2,"score":0.5238247513771057},{"id":"https://openalex.org/C2777530160","wikidata":"https://www.wikidata.org/wiki/Q41796","display_name":"Sentence","level":2,"score":0.5144177079200745},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.5042413473129272},{"id":"https://openalex.org/C2780586970","wikidata":"https://www.wikidata.org/wiki/Q1357284","display_name":"Popularity","level":2,"score":0.4556856155395508},{"id":"https://openalex.org/C148524875","wikidata":"https://www.wikidata.org/wiki/Q6975395","display_name":"F1 score","level":2,"score":0.4301866292953491},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.41780492663383484},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.3805910348892212},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0},{"id":"https://openalex.org/C77805123","wikidata":"https://www.wikidata.org/wiki/Q161272","display_name":"Social psychology","level":1,"score":0.0},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001185","descriptor_name":"Artificial Intelligence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-13-108","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-108","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-13-108","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22621266","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22621266","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire/c670d5bd-a7d1-40d2-8623-ce1e5b03bce1","is_oa":true,"landing_page_url":"https://research.manchester.ac.uk/en/publications/c670d5bd-a7d1-40d2-8623-ce1e5b03bce1","pdf_url":null,"source":{"id":"https://openalex.org/S4306400662","display_name":"Research Explorer (The University of Manchester)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I28407311","host_organization_name":"University of Manchester","host_organization_lineage":["https://openalex.org/I28407311"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Miwa, M, Thompson, P, McNaught, J, Kell, D & Ananiadou, S 2012, 'Extracting semantically enriched events from biomedical literature.', BMC Bioinformatics, vol. 13, no. 1, 108. https://doi.org/10.1186/1471-2105-13-108","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:5e143642757e4f8cb859641fe5b8c0b1","is_oa":true,"landing_page_url":"https://doaj.org/article/5e143642757e4f8cb859641fe5b8c0b1","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 13, Iss 1, p 108 (2012)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2462480","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3464657","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-13-108","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-13-108","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-13-108","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G1686462611","display_name":"Automated Biological Event Extraction from the Literature for Drug Discovery","funder_award_id":"BB/G013160/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"},{"id":"https://openalex.org/G5246379475","display_name":null,"funder_award_id":"BB/G013160/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320307770","display_name":"AstraZeneca","ror":"https://ror.org/04r9x1a08"},{"id":"https://openalex.org/F4320320309","display_name":"Joint Information Systems Committee","ror":"https://ror.org/01rv9gx86"},{"id":"https://openalex.org/F4320332167","display_name":"Directorate for Biological Sciences","ror":"https://ror.org/001xhss06"},{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2051547811.pdf","grobid_xml":"https://content.openalex.org/works/W2051547811.grobid-xml"},"referenced_works_count":119,"referenced_works":["https://openalex.org/W55204438","https://openalex.org/W56023180","https://openalex.org/W62684482","https://openalex.org/W68670080","https://openalex.org/W76749362","https://openalex.org/W96306739","https://openalex.org/W136394213","https://openalex.org/W154351976","https://openalex.org/W165790511","https://openalex.org/W228431503","https://openalex.org/W273036708","https://openalex.org/W1480287196","https://openalex.org/W1500066580","https://openalex.org/W1502957213","https://openalex.org/W1508671669","https://openalex.org/W1515842608","https://openalex.org/W1553529581","https://openalex.org/W1554540371","https://openalex.org/W1561585380","https://openalex.org/W1574901103","https://openalex.org/W1580778888","https://openalex.org/W1588558467","https://openalex.org/W1607035479","https://openalex.org/W1630763726","https://openalex.org/W1675612499","https://openalex.org/W1743055404","https://openalex.org/W1850865022","https://openalex.org/W1877373394","https://openalex.org/W1898214464","https://openalex.org/W1971352585","https://openalex.org/W1975505139","https://openalex.org/W1982464493","https://openalex.org/W1986704581","https://openalex.org/W1995672001","https://openalex.org/W1996787131","https://openalex.org/W2003185534","https://openalex.org/W2004761926","https://openalex.org/W2032566933","https://openalex.org/W2038721957","https://openalex.org/W2039040106","https://openalex.org/W2044420612","https://openalex.org/W2047477415","https://openalex.org/W2051649768","https://openalex.org/W2053154970","https://openalex.org/W2056478778","https://openalex.org/W2061669179","https://openalex.org/W2065403368","https://openalex.org/W2068517921","https://openalex.org/W2075655036","https://openalex.org/W2085541230","https://openalex.org/W2085809930","https://openalex.org/W2096537696","https://openalex.org/W2096718637","https://openalex.org/W2099369363","https://openalex.org/W2100751507","https://openalex.org/W2101727078","https://openalex.org/W2101819947","https://openalex.org/W2102563561","https://openalex.org/W2103320915","https://openalex.org/W2107141268","https://openalex.org/W2108706252","https://openalex.org/W2110871096","https://openalex.org/W2111021104","https://openalex.org/W2115915625","https://openalex.org/W2116692665","https://openalex.org/W2118585731","https://openalex.org/W2123107826","https://openalex.org/W2124738354","https://openalex.org/W2124772738","https://openalex.org/W2126276057","https://openalex.org/W2126772639","https://openalex.org/W2129769245","https://openalex.org/W2132288458","https://openalex.org/W2139865360","https://openalex.org/W2142265066","https://openalex.org/W2142786899","https://openalex.org/W2147585745","https://openalex.org/W2149147504","https://openalex.org/W2149803936","https://openalex.org/W2151401577","https://openalex.org/W2151436925","https://openalex.org/W2152398020","https://openalex.org/W2159230276","https://openalex.org/W2159583324","https://openalex.org/W2161604082","https://openalex.org/W2166111585","https://openalex.org/W2170953709","https://openalex.org/W2171283231","https://openalex.org/W2173988953","https://openalex.org/W2250777749","https://openalex.org/W2252226131","https://openalex.org/W2315233710","https://openalex.org/W2343724232","https://openalex.org/W2402929825","https://openalex.org/W2407562524","https://openalex.org/W2442495973","https://openalex.org/W2537573278","https://openalex.org/W2550419310","https://openalex.org/W2569479282","https://openalex.org/W2600716915","https://openalex.org/W2606231744","https://openalex.org/W2607303097","https://openalex.org/W2613000335","https://openalex.org/W2775486418","https://openalex.org/W2781804600","https://openalex.org/W2792932412","https://openalex.org/W2893578842","https://openalex.org/W2911367289","https://openalex.org/W2912512851","https://openalex.org/W2912915691","https://openalex.org/W2914431807","https://openalex.org/W2923652028","https://openalex.org/W2968573267","https://openalex.org/W3182758790","https://openalex.org/W4206070039","https://openalex.org/W4235505822","https://openalex.org/W4252349324","https://openalex.org/W4285719527","https://openalex.org/W4300022934"],"related_works":["https://openalex.org/W2003578783","https://openalex.org/W3004288456","https://openalex.org/W4362496998","https://openalex.org/W2184397297","https://openalex.org/W3185751515","https://openalex.org/W1522896066","https://openalex.org/W1479703980","https://openalex.org/W1663435917","https://openalex.org/W1496929818","https://openalex.org/W2094989391"],"abstract_inverted_index":{"We":[0],"have":[1],"constructed":[2],"the":[3,101],"first":[4],"practical":[5],"system":[6],"that":[7,96],"extracts":[8],"both":[9],"events":[10],"and":[11,41,52,73],"associated,":[12],"detailed":[13],"meta-knowledge":[14,22],"information":[15,23,78],"from":[16],"biomedical":[17],"literature.":[18],"The":[19],"automatically":[20],"assigned":[21],"can":[24,59,97],"be":[25,98],"used":[26,99],"to":[27,33],"refine":[28],"search":[29,37,57],"systems,":[30,88],"in":[31,61,100],"order":[32],"provide":[34],"an":[35],"extra":[36],"layer":[38],"beyond":[39],"entities":[40],"assertions,":[42],"dealing":[43],"with":[44],"phenomena":[45],"such":[46],"as":[47,92],"rhetorical":[48],"intent,":[49],"speculations,":[50],"contradictions":[51],"negations.":[53],"This":[54],"finer":[55],"grained":[56],"functionality":[58],"assist":[60],"several":[62],"important":[63],"tasks,":[64],"e.g.,":[65],"database":[66],"curation":[67],"(by":[68,76],"locating":[69],"new":[70],"experimental":[71],"knowledge)":[72],"pathway":[74],"enrichment":[75],"providing":[77],"for":[79],"inference).":[80],"To":[81],"allow":[82],"easy":[83],"integration":[84],"into":[85],"text":[86,103],"mining":[87,104],"EventMine-MK":[89],"is":[90],"provided":[91],"a":[93],"UIMA":[94],"component":[95],"interoperable":[102],"infrastructure,":[105],"U-Compare.":[106]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":11},{"year":2016,"cited_by_count":8},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":16},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
