{"id":"https://openalex.org/W2145383760","doi":"https://doi.org/10.1186/1471-2105-12-s8-s4","title":"BioCreative III interactive task: an overview","display_name":"BioCreative III interactive task: an overview","publication_year":2011,"publication_date":"2011-10-03","ids":{"openalex":"https://openalex.org/W2145383760","doi":"https://doi.org/10.1186/1471-2105-12-s8-s4","mag":"2145383760","pmid":"https://pubmed.ncbi.nlm.nih.gov/22151968"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-s8-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-s8-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S8-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S8-S4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5001355963","display_name":"Cecilia N. Arighi","orcid":"https://orcid.org/0000-0002-0803-4817"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cecilia N Arighi","raw_affiliation_strings":["Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA. arighi@dbi.udel.edu","Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA. arighi@dbi.udel.edu","institution_ids":["https://openalex.org/I86501945"]},{"raw_affiliation_string":"Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA","institution_ids":["https://openalex.org/I86501945"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047105644","display_name":"Phoebe M. Roberts","orcid":"https://orcid.org/0009-0002-4007-973X"},"institutions":[{"id":"https://openalex.org/I180857899","display_name":"Pfizer (United States)","ror":"https://ror.org/01xdqrp08","country_code":"US","type":"company","lineage":["https://openalex.org/I180857899"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Phoebe M Roberts","raw_affiliation_strings":["Pfizer Research Technology Center, Cambridge, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pfizer Research Technology Center, Cambridge, Massachusetts, USA","institution_ids":["https://openalex.org/I180857899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073524035","display_name":"Shashank Agarwal","orcid":"https://orcid.org/0000-0001-5097-416X"},"institutions":[{"id":"https://openalex.org/I43579087","display_name":"University of Wisconsin\u2013Milwaukee","ror":"https://ror.org/031q21x57","country_code":"US","type":"education","lineage":["https://openalex.org/I43579087"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shashank Agarwal","raw_affiliation_strings":["Medical Informatics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Informatics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin, USA","institution_ids":["https://openalex.org/I43579087"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064063293","display_name":"Sanmitra Bhattacharya","orcid":"https://orcid.org/0000-0002-1697-3179"},"institutions":[{"id":"https://openalex.org/I126307644","display_name":"University of Iowa","ror":"https://ror.org/036jqmy94","country_code":"US","type":"education","lineage":["https://openalex.org/I126307644"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sanmitra Bhattacharya","raw_affiliation_strings":["Department of Computer Science, The University of Iowa, Iowa City, Iowa, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Iowa, Iowa City, Iowa, USA","institution_ids":["https://openalex.org/I126307644"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029338279","display_name":"Gianni Cesareni","orcid":"https://orcid.org/0000-0002-9528-6018"},"institutions":[{"id":"https://openalex.org/I116067653","display_name":"University of Rome Tor Vergata","ror":"https://ror.org/02p77k626","country_code":"IT","type":"education","lineage":["https://openalex.org/I116067653"]},{"id":"https://openalex.org/I4210150112","display_name":"Fondazione Santa Lucia","ror":"https://ror.org/05rcxtd95","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210150112","https://openalex.org/I4210153126"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianni Cesareni","raw_affiliation_strings":["IRCCS Fondazione Santa Lucia, Italy","University of Rome Tor Vergata, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IRCCS Fondazione Santa Lucia, Italy","institution_ids":["https://openalex.org/I4210150112"]},{"raw_affiliation_string":"University of Rome Tor Vergata, Italy","institution_ids":["https://openalex.org/I116067653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088383521","display_name":"Andrew Chatr\u2010aryamontri","orcid":"https://orcid.org/0000-0002-1589-9982"},"institutions":[{"id":"https://openalex.org/I98677209","display_name":"University of Edinburgh","ror":"https://ror.org/01nrxwf90","country_code":"GB","type":"education","lineage":["https://openalex.org/I98677209"]},{"id":"https://openalex.org/I4210134627","display_name":"Wellcome Centre for Cell Biology","ror":"https://ror.org/03xbccz06","country_code":"GB","type":"facility","lineage":["https://openalex.org/I4210134627","https://openalex.org/I87048295","https://openalex.org/I98677209"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Andrew Chatr-aryamontri","raw_affiliation_strings":["Wellcome Trust Centre for Cell Biology, University of Edinburgh, UK"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Wellcome Trust Centre for Cell Biology, University of Edinburgh, UK","institution_ids":["https://openalex.org/I4210134627","https://openalex.org/I98677209"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073027507","display_name":"Simon Clematide","orcid":"https://orcid.org/0000-0003-1365-0662"},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Simon Clematide","raw_affiliation_strings":["Institute of Computational Linguistics, University of Zurich, Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics, University of Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014365246","display_name":"Pascale Gaudet","orcid":"https://orcid.org/0000-0003-1813-6857"},"institutions":[{"id":"https://openalex.org/I111979921","display_name":"Northwestern University","ror":"https://ror.org/000e0be47","country_code":"US","type":"education","lineage":["https://openalex.org/I111979921"]},{"id":"https://openalex.org/I4210100400","display_name":"Northwestern University","ror":"https://ror.org/00m6w7z96","country_code":"PH","type":"education","lineage":["https://openalex.org/I4210100400"]},{"id":"https://openalex.org/I12708293","display_name":"SIB Swiss Institute of Bioinformatics","ror":"https://ror.org/002n09z45","country_code":"CH","type":"funder","lineage":["https://openalex.org/I12708293"]}],"countries":["CH","PH","US"],"is_corresponding":false,"raw_author_name":"Pascale Gaudet","raw_affiliation_strings":["CALIPHO group, Swiss Institutes of Bioinformatics, Geneva, Switzerland","dictyBase, NIBIC, Northwestern University, Chicago, IL, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CALIPHO group, Swiss Institutes of Bioinformatics, Geneva, Switzerland","institution_ids":["https://openalex.org/I12708293"]},{"raw_affiliation_string":"dictyBase, NIBIC, Northwestern University, Chicago, IL, USA","institution_ids":["https://openalex.org/I111979921","https://openalex.org/I4210100400"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043784429","display_name":"Michelle Giglio","orcid":"https://orcid.org/0000-0001-7628-5565"},"institutions":[{"id":"https://openalex.org/I126744593","display_name":"University of Maryland, Baltimore","ror":"https://ror.org/04rq5mt64","country_code":"US","type":"education","lineage":["https://openalex.org/I126744593"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michelle Gwinn Giglio","raw_affiliation_strings":["University of Maryland, Baltimore, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Maryland, Baltimore, MD, USA","institution_ids":["https://openalex.org/I126744593"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036089181","display_name":"Ian Harrow","orcid":"https://orcid.org/0000-0003-0109-0522"},"institutions":[{"id":"https://openalex.org/I180857899","display_name":"Pfizer (United States)","ror":"https://ror.org/01xdqrp08","country_code":"US","type":"company","lineage":["https://openalex.org/I180857899"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ian Harrow","raw_affiliation_strings":["Pfizer Research Technology Center, Cambridge, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Pfizer Research Technology Center, Cambridge, Massachusetts, USA","institution_ids":["https://openalex.org/I180857899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060484643","display_name":"Eva Huala","orcid":"https://orcid.org/0000-0003-4631-7241"},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eva Huala","raw_affiliation_strings":["TAIR, Carnegie Institution for Science, Washington, DC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TAIR, Carnegie Institution for Science, Washington, DC, USA","institution_ids":["https://openalex.org/I196817621"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007203127","display_name":"Martin Krallinger","orcid":"https://orcid.org/0000-0002-2646-8782"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Martin Krallinger","raw_affiliation_strings":["Structural and Computational Biology Group, Spanish National Cancer Research Centre (CNIO), Madrid, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Structural and Computational Biology Group, Spanish National Cancer Research Centre (CNIO), Madrid, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055236937","display_name":"Ulf Leser","orcid":"https://orcid.org/0000-0003-2166-9582"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ulf Leser","raw_affiliation_strings":["Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, 10099, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, 10099, Berlin, Germany","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100336705","display_name":"Donghui Li","orcid":"https://orcid.org/0000-0003-3335-4537"},"institutions":[{"id":"https://openalex.org/I196817621","display_name":"Carnegie Institution for Science","ror":"https://ror.org/04jr01610","country_code":"US","type":"funder","lineage":["https://openalex.org/I196817621"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donghui Li","raw_affiliation_strings":["TAIR, Carnegie Institution for Science, Washington, DC, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"TAIR, Carnegie Institution for Science, Washington, DC, USA","institution_ids":["https://openalex.org/I196817621"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047059244","display_name":"Feifan Liu","orcid":"https://orcid.org/0000-0003-0881-6365"},"institutions":[{"id":"https://openalex.org/I43579087","display_name":"University of Wisconsin\u2013Milwaukee","ror":"https://ror.org/031q21x57","country_code":"US","type":"education","lineage":["https://openalex.org/I43579087"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Feifan Liu","raw_affiliation_strings":["Medical Informatics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Informatics, University of Wisconsin-Milwaukee, Milwaukee, Wisconsin, USA","institution_ids":["https://openalex.org/I43579087"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083081872","display_name":"Zhiyong Lu","orcid":"https://orcid.org/0000-0001-9998-916X"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhiyong Lu","raw_affiliation_strings":["National Center for Biotechnology Information (NCBI), Bethesda, MD, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information (NCBI), Bethesda, MD, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075523754","display_name":"Lois J. Maltais","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lois J Maltais","raw_affiliation_strings":["MGI, The Jackson Laboratory, Bar Harbor, ME, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MGI, The Jackson Laboratory, Bar Harbor, ME, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066940046","display_name":"Naoaki Okazaki","orcid":"https://orcid.org/0000-0001-7635-6175"},"institutions":[{"id":"https://openalex.org/I161296585","display_name":"Tokyo University of Science","ror":"https://ror.org/05sj3n476","country_code":"JP","type":"education","lineage":["https://openalex.org/I161296585"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Naoaki Okazaki","raw_affiliation_strings":["Department of Computer Science, University of Tokyo, Japan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tokyo, Japan","institution_ids":["https://openalex.org/I74801974","https://openalex.org/I161296585"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050128493","display_name":"Livia Perfetto","orcid":"https://orcid.org/0000-0003-4392-8725"},"institutions":[{"id":"https://openalex.org/I116067653","display_name":"University of Rome Tor Vergata","ror":"https://ror.org/02p77k626","country_code":"IT","type":"education","lineage":["https://openalex.org/I116067653"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Livia Perfetto","raw_affiliation_strings":["University of Rome Tor Vergata, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Rome Tor Vergata, Italy","institution_ids":["https://openalex.org/I116067653"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025307528","display_name":"Fabio Rinaldi","orcid":"https://orcid.org/0000-0001-5718-5462"},"institutions":[{"id":"https://openalex.org/I202697423","display_name":"University of Zurich","ror":"https://ror.org/02crff812","country_code":"CH","type":"education","lineage":["https://openalex.org/I202697423"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Fabio Rinaldi","raw_affiliation_strings":["Institute of Computational Linguistics, University of Zurich, Zurich, Switzerland"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Computational Linguistics, University of Zurich, Zurich, Switzerland","institution_ids":["https://openalex.org/I202697423"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044967495","display_name":"Rune S\u00e6tre","orcid":null},"institutions":[{"id":"https://openalex.org/I161296585","display_name":"Tokyo University of Science","ror":"https://ror.org/05sj3n476","country_code":"JP","type":"education","lineage":["https://openalex.org/I161296585"]},{"id":"https://openalex.org/I4210165875","display_name":"NTNU Samfunnsforskning","ror":"https://ror.org/05pv30e80","country_code":"NO","type":"facility","lineage":["https://openalex.org/I4210165875"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP","NO"],"is_corresponding":false,"raw_author_name":"Rune S\u00e6tre","raw_affiliation_strings":["Department of Computer Science, University of Tokyo, Japan","Department of Computer and Information Science, NTNU, Trondheim, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Tokyo, Japan","institution_ids":["https://openalex.org/I74801974","https://openalex.org/I161296585"]},{"raw_affiliation_string":"Department of Computer and Information Science, NTNU, Trondheim, Norway","institution_ids":["https://openalex.org/I4210165875"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063600106","display_name":"David Salgado","orcid":"https://orcid.org/0000-0002-5905-3591"},"institutions":[{"id":"https://openalex.org/I2801239119","display_name":"Australian Regenerative Medicine Institute","ror":"https://ror.org/02qa5kg76","country_code":"AU","type":"facility","lineage":["https://openalex.org/I2801037857","https://openalex.org/I2801239119","https://openalex.org/I56590836"]},{"id":"https://openalex.org/I56590836","display_name":"Monash University","ror":"https://ror.org/02bfwt286","country_code":"AU","type":"education","lineage":["https://openalex.org/I56590836"]},{"id":"https://openalex.org/I4210120427","display_name":"Institut de Biologie du D\u00e9veloppement Marseille","ror":"https://ror.org/02me5cy06","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I21491767","https://openalex.org/I4210096427","https://openalex.org/I4210120427"]}],"countries":["AU","FR"],"is_corresponding":false,"raw_author_name":"David Salgado","raw_affiliation_strings":["Australian Regenerative Medicine Institute, Monash University, Melbourne, Victoria, Australia","Developmental Biology Institute of Marseille Luminy (IBDML), Universit\u00e9 de la M\u00e9diterran\u00e9e, Campus de Luminy, Marseille, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Australian Regenerative Medicine Institute, Monash University, Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I2801239119","https://openalex.org/I56590836"]},{"raw_affiliation_string":"Developmental Biology Institute of Marseille Luminy (IBDML), Universit\u00e9 de la M\u00e9diterran\u00e9e, Campus de Luminy, Marseille, France","institution_ids":["https://openalex.org/I4210120427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016839456","display_name":"Padmini Srinivasan","orcid":"https://orcid.org/0000-0001-8791-403X"},"institutions":[{"id":"https://openalex.org/I126307644","display_name":"University of Iowa","ror":"https://ror.org/036jqmy94","country_code":"US","type":"education","lineage":["https://openalex.org/I126307644"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Padmini Srinivasan","raw_affiliation_strings":["Department of Computer Science, The University of Iowa, Iowa City, Iowa, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, The University of Iowa, Iowa City, Iowa, USA","institution_ids":["https://openalex.org/I126307644"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025893671","display_name":"Philippe Thomas","orcid":"https://orcid.org/0000-0001-9136-9660"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Philippe E Thomas","raw_affiliation_strings":["Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, 10099, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Humboldt-Universit\u00e4t zu Berlin, Unter den Linden 6, 10099, Berlin, Germany","institution_ids":["https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082933983","display_name":"Luca Toldo","orcid":"https://orcid.org/0000-0003-2027-5717"},"institutions":[{"id":"https://openalex.org/I164928964","display_name":"Merck (Germany)","ror":"https://ror.org/04b2dty93","country_code":"DE","type":"company","lineage":["https://openalex.org/I164928964"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Luca Toldo","raw_affiliation_strings":["Merck KGaA, Darmstadt, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Merck KGaA, Darmstadt, Germany","institution_ids":["https://openalex.org/I164928964"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068115280","display_name":"Lynette Hirschman","orcid":"https://orcid.org/0000-0001-8442-0720"},"institutions":[{"id":"https://openalex.org/I44896327","display_name":"Mitre (United States)","ror":"https://ror.org/03ks2a131","country_code":"US","type":"company","lineage":["https://openalex.org/I44896327"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lynette Hirschman","raw_affiliation_strings":["Information Technology Center, The MITRE Corporation, Bedford, MA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Information Technology Center, The MITRE Corporation, Bedford, MA, USA","institution_ids":["https://openalex.org/I44896327"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053761444","display_name":"Cathy Wu","orcid":"https://orcid.org/0000-0001-6379-8601"},"institutions":[{"id":"https://openalex.org/I86501945","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82","country_code":"US","type":"education","lineage":["https://openalex.org/I86501945"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cathy H Wu","raw_affiliation_strings":["Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics and Computational Biology, University of Delaware, Newark, DE, USA","institution_ids":["https://openalex.org/I86501945"]}]}],"institutions":[],"countries_distinct_count":11,"institutions_distinct_count":27,"corresponding_author_ids":["https://openalex.org/A5001355963"],"corresponding_institution_ids":["https://openalex.org/I86501945"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":5.321,"has_fulltext":true,"cited_by_count":82,"citation_normalized_percentile":{"value":0.96678523,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"12","issue":"S8","first_page":"S4","last_page":"S4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.00019999999494757503,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7262470126152039},{"id":"https://openalex.org/keywords/usability","display_name":"Usability","score":0.6068254709243774},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.5938839316368103},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.504675030708313},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.49292802810668945},{"id":"https://openalex.org/keywords/gene-nomenclature","display_name":"Gene nomenclature","score":0.49282267689704895},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.48802247643470764},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4763087034225464},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4620266556739807},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.44981294870376587},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.4251905381679535},{"id":"https://openalex.org/keywords/unique-identifier","display_name":"Unique identifier","score":0.41619381308555603},{"id":"https://openalex.org/keywords/human\u2013computer-interaction","display_name":"Human\u2013computer interaction","score":0.2570863664150238},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.1538158655166626},{"id":"https://openalex.org/keywords/taxonomy","display_name":"Taxonomy (biology)","score":0.12305811047554016}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7262470126152039},{"id":"https://openalex.org/C170130773","wikidata":"https://www.wikidata.org/wiki/Q216378","display_name":"Usability","level":2,"score":0.6068254709243774},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.5938839316368103},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.504675030708313},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.49292802810668945},{"id":"https://openalex.org/C62177273","wikidata":"https://www.wikidata.org/wiki/Q5531556","display_name":"Gene nomenclature","level":4,"score":0.49282267689704895},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.48802247643470764},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4763087034225464},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4620266556739807},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.44981294870376587},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.4251905381679535},{"id":"https://openalex.org/C119839945","wikidata":"https://www.wikidata.org/wiki/Q6545185","display_name":"Unique identifier","level":3,"score":0.41619381308555603},{"id":"https://openalex.org/C107457646","wikidata":"https://www.wikidata.org/wiki/Q207434","display_name":"Human\u2013computer interaction","level":1,"score":0.2570863664150238},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.1538158655166626},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.12305811047554016},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C514705636","wikidata":"https://www.wikidata.org/wiki/Q863247","display_name":"Nomenclature","level":3,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010506","descriptor_name":"Periodicals as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D010944","descriptor_name":"Plants","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1186/1471-2105-12-s8-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-s8-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S8-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22151968","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22151968","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:www.zora.uzh.ch:58307","is_oa":true,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306401281","display_name":"Zurich Open Repository and Archive (University of Zurich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I202697423","host_organization_name":"University of Zurich","host_organization_lineage":["https://openalex.org/I202697423"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Arighi, Cecilia N; Roberts, Phoebe M; Agarwal, S; Bhattacharya, S; Cesareni, G; Chatr-aryamontri, A; Clematide, S; Gaudet, P; Giglio, M G; Harrow, I; Huala, E; Krallinger, M; Leser, U; Li, D; Liu, F; Lu, Z; Maltais, Lois J; Okazaki, N; Perfetto, L; Rinaldi, Fabio; Saetre, R; Salgado, D; Srinivasan, P; Thomas, Philippe E; Toldo, L; Hirschman, L; Wu, Cathy H  (2011). BioCreative III interactive task: an overview.  BMC Bioinformatics, 12(Suppl 8):S4.","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:brage.bibsys.no:11250/2366619","is_oa":false,"landing_page_url":"http://hdl.handle.net/11250/2366619","pdf_url":null,"source":{"id":"https://openalex.org/S4306400255","display_name":"BIBSYS Brage (BIBSYS (Norway))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I173212132","host_organization_name":"Vilnius University","host_organization_lineage":["https://openalex.org/I173212132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"12","raw_type":"Journal article"},{"id":"pmh:oai:art.torvergata.it:2108/87988","is_oa":false,"landing_page_url":"http://hdl.handle.net/2108/87988","pdf_url":null,"source":{"id":"https://openalex.org/S4306400993","display_name":"Cineca Institutional Research Information System (Tor Vergata University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I116067653","host_organization_name":"University of Rome Tor Vergata","host_organization_lineage":["https://openalex.org/I116067653"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:europepmc.org:2278682","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3269939","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:mouseion.jax.org:stfb2011-1171","is_oa":false,"landing_page_url":"https://mouseion.jax.org/stfb2011/171","pdf_url":null,"source":{"id":"https://openalex.org/S4377196421","display_name":"The Mouseion at the JAXlibrary (Jackson Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210115256","host_organization_name":"Jackson Laboratory","host_organization_lineage":["https://openalex.org/I4210115256"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Research 2011","raw_type":"text"},{"id":"doi:10.5167/uzh-58307","is_oa":true,"landing_page_url":"https://doi.org/10.5167/uzh-58307","pdf_url":null,"source":{"id":"https://openalex.org/S7407051291","display_name":"Universit\u00e4t Z\u00fcrich, ZORA","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-s8-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-s8-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S8-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1178822109","display_name":"Linking Text Mining with Ontology and Systems Biology","funder_award_id":"0850319","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G2485600896","display_name":"Detection of biological interactions from biomedical literature","funder_award_id":"118396","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G250864464","display_name":"Intelligent computational control for complex structures","funder_award_id":"105315","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G4161420400","display_name":null,"funder_award_id":"100014","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G533832786","display_name":"Semi-automated semantic enrichment of biomedical literature","funder_award_id":"130558","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G6703419042","display_name":null,"funder_award_id":"100014-118396/1","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"},{"id":"https://openalex.org/G8539492476","display_name":"Global analysis of effects of forest cover change on peak runoff response","funder_award_id":"230548","funder_id":"https://openalex.org/F4320320924","funder_display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320308928","display_name":"University of Delaware","ror":"https://ror.org/01sbq1a82"},{"id":"https://openalex.org/F4320309751","display_name":"Association Fran\u00e7aise contre les Myopathies","ror":"https://ror.org/0162y2387"},{"id":"https://openalex.org/F4320320912","display_name":"Ministry of Education, Culture, Sports, Science and Technology","ror":"https://ror.org/048rj2z13"},{"id":"https://openalex.org/F4320320924","display_name":"Schweizerischer Nationalfonds zur F\u00f6rderung der Wissenschaftlichen Forschung","ror":"https://ror.org/00yjd3n13"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332736","display_name":"Novartis Pharma","ror":"https://ror.org/0013shd50"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145383760.pdf","grobid_xml":"https://content.openalex.org/works/W2145383760.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1590479039","https://openalex.org/W1968305032","https://openalex.org/W1974805744","https://openalex.org/W1977990253","https://openalex.org/W1983665800","https://openalex.org/W1994843778","https://openalex.org/W1996752926","https://openalex.org/W1997952190","https://openalex.org/W2009554640","https://openalex.org/W2039929079","https://openalex.org/W2040022355","https://openalex.org/W2040610660","https://openalex.org/W2051544387","https://openalex.org/W2061231608","https://openalex.org/W2086927156","https://openalex.org/W2090982348","https://openalex.org/W2097056536","https://openalex.org/W2099561919","https://openalex.org/W2100627415","https://openalex.org/W2100751507","https://openalex.org/W2101265630","https://openalex.org/W2101727078","https://openalex.org/W2103017472","https://openalex.org/W2103308144","https://openalex.org/W2111023940","https://openalex.org/W2126276057","https://openalex.org/W2127976940","https://openalex.org/W2131285447","https://openalex.org/W2131804401","https://openalex.org/W2133993935","https://openalex.org/W2137518425","https://openalex.org/W2155606054","https://openalex.org/W2157870551","https://openalex.org/W2161571041","https://openalex.org/W2165371346","https://openalex.org/W2168905447","https://openalex.org/W2169918010","https://openalex.org/W2772934464","https://openalex.org/W4211208250","https://openalex.org/W4234292174"],"related_works":["https://openalex.org/W2413568490","https://openalex.org/W1913624564","https://openalex.org/W3130054399","https://openalex.org/W4301062032","https://openalex.org/W2343500026","https://openalex.org/W2319837024","https://openalex.org/W2390627310","https://openalex.org/W2033159440","https://openalex.org/W2413664130","https://openalex.org/W2951946877"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,22,149,209,326,391,399,436,487],"BioCreative":[2,45,80,516],"challenge":[3],"evaluation":[4,509],"is":[5],"a":[6,33,125,193,237,258,308,507],"community-wide":[7],"effort":[8],"for":[9,40,99,220,248,505],"evaluating":[10],"text":[11,41,49,96,189],"mining":[12,42,50,97],"and":[13,35,74,93,116,121,147,161,183,199,202,232,250,253,269,276,294,362,408,424,448,450,478,499],"information":[14,430],"extraction":[15],"systems":[16,197,281,513],"applied":[17],"to":[18,57,89,128,165,192,217,260,265,284,336,347,372,379,431],"the":[19,65,72,83,91,105,108,122,130,144,159,173,181,204,243,266,288,298,306,317,324,331,340,355,367,388,396,413,419,444,452,465,491,495,515],"biological":[20,58],"domain.":[21],"biocurator":[23],"community,":[24],"as":[25,223,428],"an":[26,373,439],"active":[27],"user":[28,38,126],"of":[29,67,95,107,113,124,176,207,225,229,236,242,291,305,316,354,359,376,415,421,454,475,497,510],"biomedical":[30],"literature,":[31],"provides":[32,490],"diverse":[34],"engaged":[36],"end":[37,117],"group":[39],"tools.":[43],"Earlier":[44],"challenges":[46,455],"involved":[47,296,471],"many":[48],"teams":[51],"in":[52,79,110,143,158,180,297,350,366,382,433,472,484,514],"developing":[53],"basic":[54],"capabilities":[55],"relevant":[56,191,389],"curation,":[59,221],"but":[60,339,410],"they":[61],"did":[62,385],"not":[63,386],"address":[64,90,129],"issues":[66,356],"system":[68,259,332,341],"usage,":[69],"insertion":[70],"into":[71,314],"workflow":[73],"adoption":[75],"by":[76,274,320,406,457],"curators.":[77],"Thus":[78],"III":[81],"(BC-III),":[82],"InterActive":[84],"Task":[85,489],"(IAT)":[86],"was":[87,119,133,256,278,343,438,463],"introduced":[88],"utility":[92],"usability":[94,268,333],"tools":[98],"real-life":[100],"biocuration":[101],"tasks.":[102,486],"To":[103],"support":[104],"aims":[106],"IAT":[109,145,299,437,488],"BC-III,":[111],"involvement":[112],"both":[114],"developers":[115,449],"users":[118,295,321,467],"solicited,":[120],"development":[123],"interface":[127,267],"tasks":[131],"interactively":[132],"requested.":[134],"RESULTS:":[135],"A":[136,262,460],"User":[137],"Advisory":[138],"Group":[139],"(UAG)":[140],"actively":[141,470],"participated":[142,198],"design":[146],"assessment.":[148],"task":[150,270,370],"focused":[151],"on":[152,172,214],"gene":[153,156,169,178,226,239,351,363,368,377,423],"normalization":[154,369],"(identifying":[155,187],"mentions":[157],"article":[160],"linking":[162],"these":[163],"genes":[164,231],"standard":[166],"database":[167],"identifiers),":[168],"ranking":[170],"based":[171,213],"overall":[174,327],"importance":[175],"each":[177,254,458],"mentioned":[179],"article,":[182],"gene-oriented":[184],"document":[185,392],"retrieval":[186,393],"full":[188],"papers":[190],"selected":[194,212],"gene).":[195],"Six":[196],"all":[200],"processed":[201],"displayed":[203],"same":[205,397],"set":[206],"articles.":[208,286],"articles":[210,247,292],"were":[211,282],"content":[215],"known":[216],"be":[218,469,481],"problematic":[219],"such":[222,427],"ambiguity":[224,365],"names,":[227],"coverage":[228],"multiple":[230],"species,":[233],"or":[234],"introduction":[235],"new":[238],"name.":[240],"Members":[241],"UAG":[244,400],"curated":[245],"three":[246],"training":[249],"assessment":[251,328],"purposes,":[252],"member":[255],"assigned":[257],"review.":[261],"questionnaire":[263],"related":[264],"performance":[271,342,404],"(as":[272],"measured":[273],"precision":[275,407],"recall)":[277],"answered":[279],"after":[280],"used":[283],"curate":[285],"Although":[287],"limited":[289],"number":[290],"analyzed":[293],"experiment":[300],"precluded":[301],"rigorous":[302],"quantitative":[303],"analysis":[304,310],"results,":[307],"qualitative":[309],"provided":[311],"valuable":[312],"insight":[313],"some":[315,383],"problems":[318],"encountered":[319],"when":[322],"using":[323],"systems.":[325],"indicates":[329],"that":[330,417,442,464,502],"features":[334,416],"appealed":[335],"most":[337],"users,":[338],"suboptimal":[344],"(mainly":[345],"due":[346],"low":[348],"accuracy":[349],"normalization).":[352],"Some":[353],"included":[357],"failure":[358],"species":[360],"identification":[361,420],"name":[364],"leading":[371],"extensive":[374],"list":[375],"identifiers":[378],"review,":[380],"which,":[381],"cases,":[384],"contain":[387],"genes.":[390],"suffered":[394],"from":[395],"shortfalls.":[398],"favored":[401],"achieving":[402],"high":[403],"(measured":[405],"recall),":[409],"strongly":[411,482],"recommended":[412],"addition":[414],"facilitate":[418],"correct":[422],"its":[425],"identifier,":[426],"contextual":[429],"assist":[432],"disambiguation.":[434],"DISCUSSION:":[435],"informative":[440],"exercise":[441],"advanced":[443],"dialog":[445],"between":[446],"curators":[447],"increased":[451],"appreciation":[453],"faced":[456],"group.":[459],"major":[461],"conclusion":[462],"intended":[466],"should":[468],"every":[473],"phase":[474],"software":[476],"development,":[477],"this":[479],"will":[480],"encouraged":[483],"future":[485],"first":[492],"steps":[493],"toward":[494],"definition":[496],"metrics":[498],"functional":[500],"requirements":[501],"are":[503],"necessary":[504],"designing":[506],"formal":[508],"interactive":[511],"curation":[512],"IV":[517],"challenge.":[518]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":8},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":22}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
