{"id":"https://openalex.org/W2017539307","doi":"https://doi.org/10.1186/1471-2105-12-s1-s19","title":"Comparative analysis of protein interaction networks reveals that conserved pathways are susceptible to HIV-1 interception","display_name":"Comparative analysis of protein interaction networks reveals that conserved pathways are susceptible to HIV-1 interception","publication_year":2011,"publication_date":"2011-02-15","ids":{"openalex":"https://openalex.org/W2017539307","doi":"https://doi.org/10.1186/1471-2105-12-s1-s19","mag":"2017539307","pmid":"https://pubmed.ncbi.nlm.nih.gov/21342548"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-s1-s19","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-s1-s19","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S1-S19","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S1-S19","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073946580","display_name":"Xiaoning Qian","orcid":"https://orcid.org/0000-0002-4347-2476"},"institutions":[{"id":"https://openalex.org/I2613432","display_name":"University of South Florida","ror":"https://ror.org/032db5x82","country_code":"US","type":"education","lineage":["https://openalex.org/I2613432"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xiaoning Qian","raw_affiliation_strings":["Department of Computer Science and Engineering, University of South Florida, Tampa, FL, USA. xqian@cse.usf.edu","Department of Computer Science & Engineering, University of South Florida, Tampa, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of South Florida, Tampa, FL, USA. xqian@cse.usf.edu","institution_ids":["https://openalex.org/I2613432"]},{"raw_affiliation_string":"Department of Computer Science & Engineering, University of South Florida, Tampa, USA#TAB#","institution_ids":["https://openalex.org/I2613432"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5081620315","display_name":"Byung-Jun Yoon","orcid":"https://orcid.org/0000-0001-9328-1101"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Byung-Jun Yoon","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA","Department of Electrical and Computer Engineering, Texas A&M University,College Station,USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas A&M University, College Station, TX, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Texas A&M University,College Station,USA","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5073946580"],"corresponding_institution_ids":["https://openalex.org/I2613432"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.6651,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.68151196,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":95},"biblio":{"volume":"12","issue":"S1","first_page":"S19","last_page":"S19"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.972000002861023,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.972000002861023,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.005200000014156103,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10112","display_name":"HIV Research and Treatment","score":0.003599999938160181,"subfield":{"id":"https://openalex.org/subfields/2406","display_name":"Virology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7133035063743591},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6569948792457581},{"id":"https://openalex.org/keywords/human-immunodeficiency-virus","display_name":"Human immunodeficiency virus (HIV)","score":0.4598864018917084},{"id":"https://openalex.org/keywords/homo-sapiens","display_name":"Homo sapiens","score":0.45807573199272156},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4320184588432312},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40261346101760864},{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.23508524894714355}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7133035063743591},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6569948792457581},{"id":"https://openalex.org/C3013748606","wikidata":"https://www.wikidata.org/wiki/Q15787","display_name":"Human immunodeficiency virus (HIV)","level":2,"score":0.4598864018917084},{"id":"https://openalex.org/C2777938546","wikidata":"https://www.wikidata.org/wiki/Q5","display_name":"Homo sapiens","level":2,"score":0.45807573199272156},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4320184588432312},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40261346101760864},{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.23508524894714355},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008390","descriptor_name":"Markov Chains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015497","descriptor_name":"HIV-1","qualifier_ui":"Q000502","qualifier_name":"physiology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D015658","descriptor_name":"HIV Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-12-s1-s19","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-s1-s19","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S1-S19","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21342548","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21342548","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:oaktrust.library.tamu.edu:1969.1/183746","is_oa":false,"landing_page_url":"https://hdl.handle.net/1969.1/183746","pdf_url":null,"source":{"id":"https://openalex.org/S4306400291","display_name":"OakTrust (Texas A&M University Libraries)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I91045830","host_organization_name":"Texas A&M University","host_organization_lineage":["https://openalex.org/I91045830"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:pubmedcentral.nih.gov:3044273","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3044273","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-s1-s19","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-s1-s19","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-S1-S19","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7099999785423279,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320310847","display_name":"University of South Florida","ror":"https://ror.org/032db5x82"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2017539307.pdf","grobid_xml":"https://content.openalex.org/works/W2017539307.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W85440689","https://openalex.org/W108107236","https://openalex.org/W1966546784","https://openalex.org/W1970737407","https://openalex.org/W1971341890","https://openalex.org/W1984249061","https://openalex.org/W1996062837","https://openalex.org/W1996634009","https://openalex.org/W1999731065","https://openalex.org/W2001969264","https://openalex.org/W2003652380","https://openalex.org/W2009570821","https://openalex.org/W2017894671","https://openalex.org/W2033687160","https://openalex.org/W2042089472","https://openalex.org/W2056124433","https://openalex.org/W2068880841","https://openalex.org/W2074231493","https://openalex.org/W2077398039","https://openalex.org/W2084711836","https://openalex.org/W2091931698","https://openalex.org/W2096110335","https://openalex.org/W2099356858","https://openalex.org/W2100025044","https://openalex.org/W2102134157","https://openalex.org/W2103017472","https://openalex.org/W2104009289","https://openalex.org/W2106202847","https://openalex.org/W2107427454","https://openalex.org/W2121773288","https://openalex.org/W2122961704","https://openalex.org/W2123280311","https://openalex.org/W2126969584","https://openalex.org/W2130687290","https://openalex.org/W2131532450","https://openalex.org/W2131858707","https://openalex.org/W2134672568","https://openalex.org/W2136316164","https://openalex.org/W2137263943","https://openalex.org/W2137464714","https://openalex.org/W2139119391","https://openalex.org/W2145848202","https://openalex.org/W2147582157","https://openalex.org/W2148853951","https://openalex.org/W2153929049","https://openalex.org/W2155723007","https://openalex.org/W2160648174","https://openalex.org/W2166043581","https://openalex.org/W2166574880","https://openalex.org/W2171081680","https://openalex.org/W3214380909","https://openalex.org/W4245668478","https://openalex.org/W4255855797","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W122800452","https://openalex.org/W2099982459","https://openalex.org/W2109298101","https://openalex.org/W2007507741","https://openalex.org/W2159860826","https://openalex.org/W3192210502","https://openalex.org/W1981737222","https://openalex.org/W1569394480","https://openalex.org/W1998222399"],"abstract_inverted_index":{"BACKGROUND:":[0],"Human":[1],"immunodeficiency":[2],"virus":[3],"type":[4],"one":[5,216],"(HIV-1)":[6],"is":[7],"the":[8,13,20,38,46,76,89,109,118,122,147,158,170,178,201,218,225,228,238,252,256,294,301,305,309,312,319],"major":[9,219],"pathogen":[10],"that":[11,96,102,125,149,177,198,237,263,271,300],"causes":[12],"acquired":[14],"immune":[15],"deficiency":[16],"syndrome":[17],"(AIDS).":[18],"With":[19],"availability":[21],"of":[22,48,58,161,186,200,217,227,241,259,268,275,296,311,315,321],"large-scale":[23],"protein-protein":[24],"interaction":[25],"(PPI)":[26],"measurements,":[27],"comparative":[28,80,239,264],"network":[29,81,135,266],"analysis":[30,82,175,196,240,267],"can":[31,247],"provide":[32,248,281],"a":[33,55,71,133,182,282],"promising":[34],"way":[35],"to":[36,207,214,277,307],"study":[37,234],"host-virus":[39],"interactions":[40,78,254],"and":[41,112,255,289,317],"their":[42],"functional":[43],"significance":[44],"in":[45,152,164,169],"pathogenesis":[47],"AIDS.":[49],"Until":[50],"now,":[51],"there":[52],"have":[53,181,272],"been":[54,212],"large":[56],"number":[57],"HIV":[59],"studies":[60],"based":[61,138],"on":[62,88,139,293],"various":[63,269],"animal":[64],"models.":[65],"In":[66],"this":[67],"paper,":[68],"we":[69,92,144,156],"present":[70],"novel":[72,322],"framework":[73,285,303],"for":[74,224,286],"studying":[75],"host-HIV":[77,253],"through":[79],"across":[83,105,244],"different":[84,245,273],"species.":[85,106],"RESULTS:":[86],"Based":[87],"proposed":[90,302],"framework,":[91],"test":[93],"our":[94],"hypothesis":[95],"HIV-1":[97,159,223],"attacks":[98],"essential":[99],"biological":[100],"pathways":[101,148,168,180],"are":[103,126,150,205],"conserved":[104,151,179],"We":[107,261,298],"selected":[108],"Homo":[110],"sapiens":[111],"Mus":[113],"musculus":[114],"PPI":[115,123,172,242],"networks":[116,124,243],"with":[117,166],"largest":[119],"coverage":[120],"among":[121],"available":[127],"from":[128],"public":[129],"databases.":[130],"By":[131],"using":[132],"local":[134],"alignment":[136],"algorithm":[137],"hidden":[140],"Markov":[141],"models":[142],"(HMMs),":[143],"first":[145],"identified":[146],"both":[153],"networks.":[154],"Next,":[155],"analyzed":[157],"susceptibility":[160,276],"these":[162],"pathways,":[163],"comparison":[165],"random":[167],"human":[171],"network.":[173],"Our":[174],"shows":[176,197,236],"significantly":[183],"higher":[184],"probability":[185],"being":[187],"intercepted":[188],"by":[189,222],"HIV-1.":[190,260,297],"Furthermore,":[191],"Gene":[192],"Ontology":[193],"(GO)":[194],"enrichment":[195],"most":[199],"enriched":[202],"GO":[203],"terms":[204],"related":[206],"signal":[208],"transduction,":[209],"which":[210],"has":[211,304],"conjectured":[213],"be":[215],"mechanisms":[220,258,295,314],"targeted":[221],"takeover":[226],"host":[229],"cell.":[230],"CONCLUSIONS:":[231],"This":[232],"proof-of-concept":[233],"clearly":[235],"species":[246,270],"important":[249,313],"insights":[250],"into":[251],"detailed":[257],"expect":[262],"multiple":[265],"levels":[274],"similar":[278],"lentiviruses":[279],"may":[280],"very":[283],"effective":[284],"generating":[287],"novel,":[288],"experimentally":[290],"verifiable":[291],"hypotheses":[292],"believe":[299],"potential":[306],"expedite":[308],"elucidation":[310],"HIV-1,":[316],"ultimately,":[318],"discovery":[320],"anti-HIV":[323],"drugs.":[324]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
