{"id":"https://openalex.org/W2075059455","doi":"https://doi.org/10.1186/1471-2105-12-475","title":"Performance analysis of novel methods for detecting epistasis","display_name":"Performance analysis of novel methods for detecting epistasis","publication_year":2011,"publication_date":"2011-12-01","ids":{"openalex":"https://openalex.org/W2075059455","doi":"https://doi.org/10.1186/1471-2105-12-475","mag":"2075059455","pmid":"https://pubmed.ncbi.nlm.nih.gov/22172045"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-475","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-475","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-475","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-475","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007539735","display_name":"Junliang Shang","orcid":"https://orcid.org/0000-0002-8488-2228"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Junliang Shang","raw_affiliation_strings":["School of Computer Science & Technology, Xidian University, Xi'an 710071, China. jlshang@mail.xidian.edu.cn","(School of Computer Science and Technology, Xidian University, Xi'an, China)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science & Technology, Xidian University, Xi'an 710071, China. jlshang@mail.xidian.edu.cn","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"(School of Computer Science and Technology, Xidian University, Xi'an, China)","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113615345","display_name":"Junying Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Junying Zhang","raw_affiliation_strings":["School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","(School of Computer Science and Technology, Xidian University, Xi'an, China)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"(School of Computer Science and Technology, Xidian University, Xi'an, China)","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055416795","display_name":"Yan Sun","orcid":"https://orcid.org/0000-0002-5080-0781"},"institutions":[{"id":"https://openalex.org/I4210145976","display_name":"Xi'an Academy of Fine Arts","ror":"https://ror.org/04ebe6j88","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210145976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yan Sun","raw_affiliation_strings":["Shannxi people's fine arts publishing house, Xi'an, 710003, China","Shannxi people's fine arts publishing house, Xi'an, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Shannxi people's fine arts publishing house, Xi'an, 710003, China","institution_ids":["https://openalex.org/I4210145976"]},{"raw_affiliation_string":"Shannxi people's fine arts publishing house, Xi'an, China","institution_ids":["https://openalex.org/I4210145976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100326831","display_name":"Dan Liu","orcid":"https://orcid.org/0000-0002-2198-3910"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Dan Liu","raw_affiliation_strings":["School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","(School of Computer Science and Technology, Xidian University, Xi'an, China)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"(School of Computer Science and Technology, Xidian University, Xi'an, China)","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076746942","display_name":"Daojun Ye","orcid":null},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Daojun Ye","raw_affiliation_strings":["School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","(School of Computer Science and Technology, Xidian University, Xi'an, China)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"(School of Computer Science and Technology, Xidian University, Xi'an, China)","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110216836","display_name":"Yaling Yin","orcid":null},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]},{"id":"https://openalex.org/I211738395","display_name":"Financial University","ror":"https://ror.org/01hnrbb29","country_code":"RU","type":"education","lineage":["https://openalex.org/I211738395"]},{"id":"https://openalex.org/I4210100953","display_name":"Xi'an University of Finance and Economics","ror":"https://ror.org/01b9y2p27","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210100953"]}],"countries":["CN","RU"],"is_corresponding":false,"raw_author_name":"Yaling Yin","raw_affiliation_strings":["Information School, Xi'an Economical and Financial University, Xi'an, 710100, China","School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","Information School, Xi\u2019an Economical and Financial University, Xi\u2019an, China","School of Computer Science & Technology, Xidian University, Xi'an, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Information School, Xi'an Economical and Financial University, Xi'an, 710100, China","institution_ids":["https://openalex.org/I4210100953"]},{"raw_affiliation_string":"School of Computer Science & Technology, Xidian University, Xi'an, 710071, China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"Information School, Xi\u2019an Economical and Financial University, Xi\u2019an, China","institution_ids":["https://openalex.org/I211738395"]},{"raw_affiliation_string":"School of Computer Science & Technology, Xidian University, Xi'an, China","institution_ids":["https://openalex.org/I149594827"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5007539735","https://openalex.org/A5113615345"],"corresponding_institution_ids":["https://openalex.org/I149594827"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.0687,"has_fulltext":true,"cited_by_count":71,"citation_normalized_percentile":{"value":0.86981417,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"12","issue":"1","first_page":"475","last_page":"475"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.21070000529289246,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.21070000529289246,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10862","display_name":"AI in cancer detection","score":0.16869999468326569,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.08250000327825546,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/epistasis","display_name":"Epistasis","score":0.7148469686508179},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7094071507453918},{"id":"https://openalex.org/keywords/phenocopy","display_name":"Phenocopy","score":0.6974966526031494},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.6912956833839417},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.47334861755371094},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4607352614402771},{"id":"https://openalex.org/keywords/sensitivity","display_name":"Sensitivity (control systems)","score":0.43188273906707764},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.42134347558021545},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.20279064774513245},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.08995133638381958},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08836919069290161}],"concepts":[{"id":"https://openalex.org/C61727976","wikidata":"https://www.wikidata.org/wiki/Q751748","display_name":"Epistasis","level":3,"score":0.7148469686508179},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7094071507453918},{"id":"https://openalex.org/C12387725","wikidata":"https://www.wikidata.org/wiki/Q937024","display_name":"Phenocopy","level":4,"score":0.6974966526031494},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.6912956833839417},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.47334861755371094},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4607352614402771},{"id":"https://openalex.org/C21200559","wikidata":"https://www.wikidata.org/wiki/Q7451068","display_name":"Sensitivity (control systems)","level":2,"score":0.43188273906707764},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.42134347558021545},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.20279064774513245},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.08995133638381958},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08836919069290161},{"id":"https://openalex.org/C24326235","wikidata":"https://www.wikidata.org/wiki/Q126095","display_name":"Electronic engineering","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C143065580","wikidata":"https://www.wikidata.org/wiki/Q3285695","display_name":"Mutant","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004843","descriptor_name":"Epistasis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004843","descriptor_name":"Epistasis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004843","descriptor_name":"Epistasis, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-12-475","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-475","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-475","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22172045","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22172045","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:666ce898dce5486f962053148696e327","is_oa":true,"landing_page_url":"https://doaj.org/article/666ce898dce5486f962053148696e327","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 12, Iss 1, p 475 (2011)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2267020","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3259123","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-475","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-475","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-475","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2075059455.pdf","grobid_xml":"https://content.openalex.org/works/W2075059455.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W113578367","https://openalex.org/W1509581215","https://openalex.org/W1522239197","https://openalex.org/W1562526954","https://openalex.org/W1822695366","https://openalex.org/W1966315117","https://openalex.org/W1974510435","https://openalex.org/W1980771638","https://openalex.org/W1981723690","https://openalex.org/W1984604596","https://openalex.org/W1988185259","https://openalex.org/W1996793801","https://openalex.org/W1997744129","https://openalex.org/W1999851477","https://openalex.org/W2010796941","https://openalex.org/W2015523078","https://openalex.org/W2027567972","https://openalex.org/W2033383209","https://openalex.org/W2037679672","https://openalex.org/W2041170649","https://openalex.org/W2042103448","https://openalex.org/W2043192290","https://openalex.org/W2061324458","https://openalex.org/W2063575312","https://openalex.org/W2067523962","https://openalex.org/W2070082005","https://openalex.org/W2076011171","https://openalex.org/W2076220518","https://openalex.org/W2083246944","https://openalex.org/W2083944388","https://openalex.org/W2084150578","https://openalex.org/W2085672042","https://openalex.org/W2092969276","https://openalex.org/W2093805274","https://openalex.org/W2096774909","https://openalex.org/W2100934875","https://openalex.org/W2102150960","https://openalex.org/W2106508416","https://openalex.org/W2108352360","https://openalex.org/W2118556950","https://openalex.org/W2123427204","https://openalex.org/W2125858955","https://openalex.org/W2129407334","https://openalex.org/W2151920593","https://openalex.org/W2154572047","https://openalex.org/W2155781289","https://openalex.org/W2167920923","https://openalex.org/W2171677905","https://openalex.org/W2242514529","https://openalex.org/W2521182560","https://openalex.org/W2801222638","https://openalex.org/W2905472553","https://openalex.org/W3104824402","https://openalex.org/W4248415074"],"related_works":["https://openalex.org/W1977231502","https://openalex.org/W4388651788","https://openalex.org/W2034072805","https://openalex.org/W2409883125","https://openalex.org/W2312611866","https://openalex.org/W4229785858","https://openalex.org/W2030681712","https://openalex.org/W4386812903","https://openalex.org/W2086789528","https://openalex.org/W2093417376"],"abstract_inverted_index":{"BACKGROUND:":[0],"Epistasis":[1],"is":[2,35,124,143,188,199,211,229,251],"recognized":[3],"fundamentally":[4],"important":[5],"for":[6,18,94,279,286],"understanding":[7],"the":[8,43,230,252,255,268,281],"mechanism":[9],"of":[10,42,56,114,140,158,185,193,226,247,259],"disease-causing":[11],"genetic":[12],"variation.":[13],"Though":[14],"many":[15],"novel":[16],"methods":[17,44,59,72,82,97,142,282],"detecting":[19,165],"epistasis":[20,57,107,166,177,287],"have":[21],"been":[22],"proposed,":[23],"few":[24],"studies":[25],"focus":[26],"on":[27,65,100,164,175,195,206,215,221,232,242],"their":[28,75],"comparison.":[29,95],"Undertaking":[30],"a":[31,40,53],"comprehensive":[32],"comparison":[33,54,274],"study":[34,55,275],"an":[36],"urgent":[37],"task":[38],"and":[39,78,87,109,121,135,148,154,171,204,209,218,235,238,263,270,283],"pathway":[41],"to":[45,74,190,201,213],"real":[46],"applications.":[47],"RESULTS:":[48],"This":[49,273],"paper":[50],"aims":[51],"at":[52],"detection":[58,127,159],"through":[60],"applying":[61,280],"related":[62],"software":[63],"packages":[64],"datasets.":[66],"For":[67],"this":[68],"purpose,":[69],"we":[70],"categorize":[71],"according":[73],"search":[76],"strategies,":[77],"select":[79],"five":[80],"representative":[81],"(TEAM,":[83],"BOOST,":[84],"SNPRuler,":[85],"AntEpiSeeker":[86,161,187,228,262],"epiMODE)":[88],"originating":[89],"from":[90],"different":[91,104],"underlying":[92],"techniques":[93],"The":[96,112],"are":[98,131,265],"tested":[99],"simulated":[101],"datasets":[102],"with":[103],"size,":[105],"various":[106],"models,":[108,197,208],"with/without":[110],"noise.":[111],"types":[113,192],"noise":[115,194],"include":[116],"missing":[117,219],"data,":[118],"genotyping":[119,202],"error":[120,203],"phenocopy.":[122],"Performance":[123],"evaluated":[125],"by":[126],"power":[128],"(three":[129],"forms":[130],"introduced),":[132],"robustness,":[133,186],"sensitivity":[134],"computational":[136,248],"complexity.":[137],"CONCLUSIONS:":[138],"None":[139],"selected":[141],"perfect":[144],"in":[145],"all":[146,191],"scenarios":[147],"each":[149],"has":[150],"its":[151],"own":[152],"merits":[153],"limitations.":[155],"In":[156,183,224,245,257],"terms":[157,184,225,246,258],"power,":[160],"performs":[162,173],"best":[163,174],"displaying":[167,178],"marginal":[168,180],"effects":[169,181],"(eME)":[170],"BOOST":[172,198,239,250,264],"identifying":[176],"no":[179],"(eNME).":[182],"robust":[189,200,212],"eME":[196,216,233],"phenocopy":[205,214],"eNME":[207,222,243],"SNPRuler":[210,237],"models":[217,234],"data":[220],"models.":[223,244],"sensitivity,":[227],"winner":[231],"both":[236],"perform":[240],"well":[241],"complexity,":[249],"fastest":[253],"among":[254],"methods.":[256,272],"overall":[260],"performance,":[261],"recommended":[266],"as":[267],"efficient":[269],"effective":[271],"may":[276],"provide":[277],"guidelines":[278],"further":[284],"clues":[285],"detection.":[288]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":8},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":3}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
