{"id":"https://openalex.org/W2130913281","doi":"https://doi.org/10.1186/1471-2105-12-418","title":"Improving ontologies by automatic reasoning and evaluation of logical definitions","display_name":"Improving ontologies by automatic reasoning and evaluation of logical definitions","publication_year":2011,"publication_date":"2011-10-27","ids":{"openalex":"https://openalex.org/W2130913281","doi":"https://doi.org/10.1186/1471-2105-12-418","mag":"2130913281","pmid":"https://pubmed.ncbi.nlm.nih.gov/22032770"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-418","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-418","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-418","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-418","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5047602412","display_name":"Sebastian K\u00f6hler","orcid":"https://orcid.org/0000-0002-5316-1399"},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"funder","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Sebastian K\u00f6hler","raw_affiliation_strings":["Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany. sebastian.koehler@charite.de","Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany. sebastian.koehler@charite.de","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108107330","display_name":"Sebastian Bauer","orcid":null},"institutions":[{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"funder","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sebastian Bauer","raw_affiliation_strings":["Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany","institution_ids":["https://openalex.org/I7877124"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002223413","display_name":"Chris Mungall","orcid":"https://orcid.org/0000-0002-6601-2165"},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris J Mungall","raw_affiliation_strings":["Lawrence Berkeley National Laboratory, Mail Stop 64R0121, Berkeley, CA, 94720, USA"],"affiliations":[{"raw_affiliation_string":"Lawrence Berkeley National Laboratory, Mail Stop 64R0121, Berkeley, CA, 94720, USA","institution_ids":["https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079585205","display_name":"Gabriele Carletti","orcid":null},"institutions":[{"id":"https://openalex.org/I112859197","display_name":"Universit\u00e0 di Camerino","ror":"https://ror.org/0005w8d69","country_code":"IT","type":"education","lineage":["https://openalex.org/I112859197"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gabriele Carletti","raw_affiliation_strings":["Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, Via Madonna delle Carceri 9, 62032, Camerino (MC), Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Matematica e Informatica, Universit\u00e0 di Camerino, Via Madonna delle Carceri 9, 62032, Camerino (MC), Italy","institution_ids":["https://openalex.org/I112859197"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085879565","display_name":"Cynthia L. Smith","orcid":"https://orcid.org/0000-0003-3691-0324"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cynthia L Smith","raw_affiliation_strings":["The Jackson Laboratory, Bar Harbor, ME, 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, Bar Harbor, ME, 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059588755","display_name":"Paul N. Schofield","orcid":"https://orcid.org/0000-0002-5111-7263"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB","US"],"is_corresponding":false,"raw_author_name":"Paul Schofield","raw_affiliation_strings":["Department of Physiology, Development, and Neuroscience, University of Cambridge, Cambridge, CB2 3EG, UK","The Jackson Laboratory, Bar Harbor, ME, 04609, USA"],"affiliations":[{"raw_affiliation_string":"Department of Physiology, Development, and Neuroscience, University of Cambridge, Cambridge, CB2 3EG, UK","institution_ids":["https://openalex.org/I241749"]},{"raw_affiliation_string":"The Jackson Laboratory, Bar Harbor, ME, 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089900113","display_name":"Georgios V. Gkoutos","orcid":"https://orcid.org/0000-0002-2061-091X"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Georgios V Gkoutos","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge, Cambridge CB2 3EH, UK"],"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge, Cambridge CB2 3EH, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033225381","display_name":"Peter N. Robinson","orcid":"https://orcid.org/0000-0002-0736-9199"},"institutions":[{"id":"https://openalex.org/I4210127521","display_name":"Berlin-Brandenburger Centrum f\u00fcr Regenerative Therapien","ror":"https://ror.org/03781zn34","country_code":"DE","type":"facility","lineage":["https://openalex.org/I4210127521"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"funder","lineage":["https://openalex.org/I7877124"]},{"id":"https://openalex.org/I4210142260","display_name":"Max Planck Institute for Molecular Genetics","ror":"https://ror.org/03ate3e03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210142260"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter N Robinson","raw_affiliation_strings":["Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany","Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany","Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195, Berlin, Germany"],"affiliations":[{"raw_affiliation_string":"Berlin-Brandenburg Center for Regenerative Therapies (BCRT), Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany","institution_ids":["https://openalex.org/I4210127521","https://openalex.org/I7877124"]},{"raw_affiliation_string":"Institute for Medical Genetics and Human Genetics, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Augustenburger Platz 1, 13353, Berlin, Germany","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Max Planck Institute for Molecular Genetics, Ihnestrasse 73, 14195, Berlin, Germany","institution_ids":["https://openalex.org/I4210142260"]}]}],"institutions":[],"countries_distinct_count":4,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5047602412"],"corresponding_institution_ids":["https://openalex.org/I7877124"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1234,"currency":"EUR","value_usd":1330},"fwci":2.5346,"has_fulltext":true,"cited_by_count":40,"citation_normalized_percentile":{"value":0.89851619,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"12","issue":"1","first_page":"418","last_page":"418"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9837999939918518,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.8010656833648682},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7822884321212769},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.6178779006004333},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.6149246096611023},{"id":"https://openalex.org/keywords/ontology-based-data-integration","display_name":"Ontology-based data integration","score":0.577049195766449},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.5540682673454285},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.5354222655296326},{"id":"https://openalex.org/keywords/ontology-components","display_name":"Ontology components","score":0.5136010646820068},{"id":"https://openalex.org/keywords/suggested-upper-merged-ontology","display_name":"Suggested Upper Merged Ontology","score":0.49307820200920105},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.42235642671585083},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3977510631084442},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.26373958587646484},{"id":"https://openalex.org/keywords/epistemology","display_name":"Epistemology","score":0.08776813745498657}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.8010656833648682},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7822884321212769},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.6178779006004333},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.6149246096611023},{"id":"https://openalex.org/C22550185","wikidata":"https://www.wikidata.org/wiki/Q7095047","display_name":"Ontology-based data integration","level":3,"score":0.577049195766449},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.5540682673454285},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.5354222655296326},{"id":"https://openalex.org/C154210476","wikidata":"https://www.wikidata.org/wiki/Q7095057","display_name":"Ontology components","level":5,"score":0.5136010646820068},{"id":"https://openalex.org/C50971890","wikidata":"https://www.wikidata.org/wiki/Q7635093","display_name":"Suggested Upper Merged Ontology","level":4,"score":0.49307820200920105},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.42235642671585083},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3977510631084442},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.26373958587646484},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.08776813745498657},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008128","descriptor_name":"Logic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008128","descriptor_name":"Logic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008128","descriptor_name":"Logic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019359","descriptor_name":"Knowledge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019359","descriptor_name":"Knowledge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019359","descriptor_name":"Knowledge","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":11,"locations":[{"id":"doi:10.1186/1471-2105-12-418","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-418","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-418","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22032770","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22032770","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:aber.ac.uk:publications/fbd22b69-ce44-4700-8746-3f38c7d73af1","is_oa":false,"landing_page_url":"http://hdl.handle.net/2160/12084","pdf_url":null,"source":{"id":"https://openalex.org/S4306401660","display_name":"Aberystwyth Research portal (Aberystwyth University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I16038530","host_organization_name":"Aberystwyth University","host_organization_lineage":["https://openalex.org/I16038530"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:doaj.org/article:8ba06e942b3a42c49ad51ffca72a4ed8","is_oa":true,"landing_page_url":"https://doaj.org/article/8ba06e942b3a42c49ad51ffca72a4ed8","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 12, Iss 1, p 418 (2011)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2223855","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3224779","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:osti.gov:1626279","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1626279","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/ce40e02a-264a-471c-96ca-7e841f48c7ed","is_oa":true,"landing_page_url":"https://research.birmingham.ac.uk/en/publications/ce40e02a-264a-471c-96ca-7e841f48c7ed","pdf_url":null,"source":{"id":"https://openalex.org/S4306402634","display_name":"University of Birmingham Research Portal (University of Birmingham)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I79619799","host_organization_name":"University of Birmingham","host_organization_lineage":["https://openalex.org/I79619799"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Kohler, S, Bauer, S, Mungall, C J, Carletti, G, Smith, C L, Schofield, P, Gkoutos, G V & Robinson, P N 2011, 'Improving ontologies by automatic reasoning and evaluation of logical definitions', BMC Bioinformatics, vol. 12, pp. 418. https://doi.org/10.1186/1471-2105-12-418","raw_type":"article"},{"id":"pmh:oai:pure.mpg.de:item_1583324","is_oa":false,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-0010-7820-6","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/240641","is_oa":true,"landing_page_url":"http://www.dspace.cam.ac.uk/handle/1810/240641","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/266018","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/266018","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.17863/cam.11412","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.11412","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-418","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-418","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-418","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5106512922","display_name":null,"funder_award_id":"Deutsche Forschungsgemeinschaft (DFG","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G7225624288","display_name":null,"funder_award_id":"This work was","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G8320450649","display_name":null,"funder_award_id":"0313911","funder_id":"https://openalex.org/F4320321114","funder_display_name":"Bundesministerium f\u00fcr Bildung und Forschung"},{"id":"https://openalex.org/G8330397625","display_name":null,"funder_award_id":"Funding","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2130913281.pdf","grobid_xml":"https://content.openalex.org/works/W2130913281.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W5482556","https://openalex.org/W618046730","https://openalex.org/W1482585805","https://openalex.org/W1562756378","https://openalex.org/W1972562845","https://openalex.org/W2007117925","https://openalex.org/W2022451103","https://openalex.org/W2024816413","https://openalex.org/W2033377040","https://openalex.org/W2048024098","https://openalex.org/W2048495389","https://openalex.org/W2100017293","https://openalex.org/W2103017472","https://openalex.org/W2106356140","https://openalex.org/W2111601482","https://openalex.org/W2113142309","https://openalex.org/W2116034137","https://openalex.org/W2124991490","https://openalex.org/W2126434293","https://openalex.org/W2136410628","https://openalex.org/W2152889283","https://openalex.org/W2154829072","https://openalex.org/W2162385209","https://openalex.org/W2163109444","https://openalex.org/W2163670493","https://openalex.org/W2165433828","https://openalex.org/W2187363965","https://openalex.org/W2399721281","https://openalex.org/W4250465523"],"related_works":["https://openalex.org/W1506177826","https://openalex.org/W2726617685","https://openalex.org/W2223008607","https://openalex.org/W2732632690","https://openalex.org/W2012420033","https://openalex.org/W4206428734","https://openalex.org/W1794266373","https://openalex.org/W2365397974","https://openalex.org/W2102229151","https://openalex.org/W2138664789"],"abstract_inverted_index":{"Logical":[0],"definitions":[1],"of":[2,27],"terms":[3],"from":[4],"biomedical":[5],"ontologies":[6],"represent":[7],"an":[8],"important":[9],"resource":[10],"for":[11,25],"error":[12],"and":[13,22],"disagreement":[14],"detection.":[15],"GULO":[16],"gives":[17],"ontology":[18],"curators":[19],"a":[20],"fast":[21],"simple":[23],"tool":[24],"validation":[26],"their":[28],"work.":[29]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
