{"id":"https://openalex.org/W2139616612","doi":"https://doi.org/10.1186/1471-2105-12-411","title":"EPEPT: A web service for enhanced P-value estimation in permutation tests","display_name":"EPEPT: A web service for enhanced P-value estimation in permutation tests","publication_year":2011,"publication_date":"2011-10-24","ids":{"openalex":"https://openalex.org/W2139616612","doi":"https://doi.org/10.1186/1471-2105-12-411","mag":"2139616612","pmid":"https://pubmed.ncbi.nlm.nih.gov/22024252"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-411","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-411","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-411","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-411","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5085788761","display_name":"Theo Knijnenburg","orcid":"https://orcid.org/0000-0001-6397-4222"},"institutions":[{"id":"https://openalex.org/I2898336195","display_name":"The Netherlands Cancer Institute","ror":"https://ror.org/03xqtf034","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I2898336195"]},{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]},{"id":"https://openalex.org/I4210111138","display_name":"Oncode Institute","ror":"https://ror.org/01n92vv28","country_code":"NL","type":"education","lineage":["https://openalex.org/I4210111138"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["NL","US"],"is_corresponding":true,"raw_author_name":"Theo A Knijnenburg","raw_affiliation_strings":["Institute for Systems Biology, Seattle, WA, USA. tknijnenburg@systemsbiology.org","Institute for Systems Biology, Seattle, USA","Bioinformatics and Statistics, Division of Molecular Biology, Netherlands Cancer Institute, Amsterdam, The Netherlands"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology, Seattle, WA, USA. tknijnenburg@systemsbiology.org","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology, Seattle, USA","institution_ids":["https://openalex.org/I3148997608","https://openalex.org/I58610484"]},{"raw_affiliation_string":"Bioinformatics and Statistics, Division of Molecular Biology, Netherlands Cancer Institute, Amsterdam, The Netherlands","institution_ids":["https://openalex.org/I4210111138","https://openalex.org/I2898336195"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012601515","display_name":"Jake Lin","orcid":"https://orcid.org/0000-0001-9928-1663"},"institutions":[{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jake Lin","raw_affiliation_strings":["Institute for Systems Biology, Seattle, WA, USA","Institute for Systems Biology, Seattle, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology, Seattle, WA, USA","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology, Seattle, USA#TAB#","institution_ids":["https://openalex.org/I3148997608","https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046017056","display_name":"Hector Rovira","orcid":null},"institutions":[{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hector Rovira","raw_affiliation_strings":["Institute for Systems Biology, Seattle, WA, USA","Institute for Systems Biology, Seattle, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology, Seattle, WA, USA","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology, Seattle, USA#TAB#","institution_ids":["https://openalex.org/I3148997608","https://openalex.org/I58610484"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056677361","display_name":"John Boyle","orcid":"https://orcid.org/0000-0002-5378-5361"},"institutions":[{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Boyle","raw_affiliation_strings":["Institute for Systems Biology, Seattle, WA, USA","Institute for Systems Biology, Seattle, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology, Seattle, WA, USA","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology, Seattle, USA#TAB#","institution_ids":["https://openalex.org/I3148997608","https://openalex.org/I58610484"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061460061","display_name":"Ilya Shmulevich","orcid":"https://orcid.org/0000-0002-4410-8780"},"institutions":[{"id":"https://openalex.org/I3148997608","display_name":"Institute for Systems Biology","ror":"https://ror.org/02tpgw303","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I3148997608"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ilya Shmulevich","raw_affiliation_strings":["Institute for Systems Biology, Seattle, WA, USA","Institute for Systems Biology, Seattle, USA#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Systems Biology, Seattle, WA, USA","institution_ids":["https://openalex.org/I3148997608"]},{"raw_affiliation_string":"Institute for Systems Biology, Seattle, USA#TAB#","institution_ids":["https://openalex.org/I3148997608","https://openalex.org/I58610484"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5085788761"],"corresponding_institution_ids":["https://openalex.org/I2898336195","https://openalex.org/I3148997608","https://openalex.org/I4210111138","https://openalex.org/I58610484"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1981,"has_fulltext":true,"cited_by_count":8,"citation_normalized_percentile":{"value":0.63296494,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"12","issue":"1","first_page":"411","last_page":"411"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.13490000367164612,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.13490000367164612,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.11429999768733978,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.09640000015497208,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7479787468910217},{"id":"https://openalex.org/keywords/permutation","display_name":"Permutation (music)","score":0.7400439381599426},{"id":"https://openalex.org/keywords/estimator","display_name":"Estimator","score":0.706579327583313},{"id":"https://openalex.org/keywords/resampling","display_name":"Resampling","score":0.5862811207771301},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.5199435949325562},{"id":"https://openalex.org/keywords/source-code","display_name":"Source code","score":0.4944727420806885},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.4905175566673279},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4807714819908142},{"id":"https://openalex.org/keywords/service","display_name":"Service (business)","score":0.4491278827190399},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.4477241635322571},{"id":"https://openalex.org/keywords/value","display_name":"Value (mathematics)","score":0.43654462695121765},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3837493360042572},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.292532742023468},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.27979564666748047},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2488713264465332},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.17817628383636475},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.15714406967163086},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14909455180168152}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7479787468910217},{"id":"https://openalex.org/C21308566","wikidata":"https://www.wikidata.org/wiki/Q7169365","display_name":"Permutation (music)","level":2,"score":0.7400439381599426},{"id":"https://openalex.org/C185429906","wikidata":"https://www.wikidata.org/wiki/Q1130160","display_name":"Estimator","level":2,"score":0.706579327583313},{"id":"https://openalex.org/C150921843","wikidata":"https://www.wikidata.org/wiki/Q1170431","display_name":"Resampling","level":2,"score":0.5862811207771301},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.5199435949325562},{"id":"https://openalex.org/C43126263","wikidata":"https://www.wikidata.org/wiki/Q128751","display_name":"Source code","level":2,"score":0.4944727420806885},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.4905175566673279},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4807714819908142},{"id":"https://openalex.org/C2780378061","wikidata":"https://www.wikidata.org/wiki/Q25351891","display_name":"Service (business)","level":2,"score":0.4491278827190399},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.4477241635322571},{"id":"https://openalex.org/C2776291640","wikidata":"https://www.wikidata.org/wiki/Q2912517","display_name":"Value (mathematics)","level":2,"score":0.43654462695121765},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3837493360042572},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.292532742023468},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.27979564666748047},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2488713264465332},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.17817628383636475},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.15714406967163086},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14909455180168152},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C136264566","wikidata":"https://www.wikidata.org/wiki/Q159810","display_name":"Economy","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011381","descriptor_name":"Programming Languages","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012044","descriptor_name":"Regression Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-12-411","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-411","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-411","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:22024252","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22024252","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:009b13a9f1184e51894ac9d473c755b5","is_oa":true,"landing_page_url":"https://doaj.org/article/009b13a9f1184e51894ac9d473c755b5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 12, Iss 1, p 411 (2011)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2284395","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3277916","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-411","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-411","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-411","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4065563902","display_name":null,"funder_award_id":"P50 GM076547","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7063900871","display_name":null,"funder_award_id":"HHSN272200700038C","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8343853698","display_name":null,"funder_award_id":"HHSN272200700038C","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2139616612.pdf","grobid_xml":"https://content.openalex.org/works/W2139616612.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1980681597","https://openalex.org/W2020859582","https://openalex.org/W2028031755","https://openalex.org/W2130410032","https://openalex.org/W2144751786","https://openalex.org/W2153545013","https://openalex.org/W2157795344","https://openalex.org/W2612575796","https://openalex.org/W2916740116","https://openalex.org/W2917476117","https://openalex.org/W4241876622","https://openalex.org/W4294107304"],"related_works":["https://openalex.org/W2021333301","https://openalex.org/W4246719347","https://openalex.org/W2077508419","https://openalex.org/W2006114390","https://openalex.org/W2380800094","https://openalex.org/W2056203905","https://openalex.org/W2055801436","https://openalex.org/W4385400511","https://openalex.org/W2162206208","https://openalex.org/W2023660371"],"abstract_inverted_index":{"BACKGROUND:":[0],"In":[1],"computational":[2,161],"biology,":[3],"permutation":[4,171],"tests":[5],"have":[6],"become":[7],"a":[8,36,103,123],"widely":[9],"used":[10,159],"tool":[11],"to":[12,49,72,98],"assess":[13],"the":[14,23,28,32,73,99,114,136,170,176,180,202],"statistical":[15,33],"significance":[16],"of":[17,26,40,139,154,183,191],"an":[18,63,205],"event":[19],"under":[20],"investigation.":[21],"However,":[22],"common":[24,156],"way":[25],"computing":[27],"P-value,":[29],"which":[30,66],"expresses":[31],"significance,":[34],"requires":[35,67],"very":[37],"large":[38],"number":[39],"permutations":[41,70],"when":[42],"small":[43,81],"(and":[44],"thus":[45],"interesting)":[46],"P-values":[47],"are":[48],"be":[50,118,148,186],"accurately":[51],"estimated.":[52],"This":[53,111],"is":[54,95],"computationally":[55],"expensive":[56],"and":[57,94,106,173,197,207],"often":[58],"infeasible.":[59],"Recently,":[60],"we":[61],"proposed":[62,85],"alternative":[64],"estimator,":[65],"far":[68],"fewer":[69],"compared":[71],"standard":[74],"empirical":[75],"approach":[76],"while":[77],"still":[78],"reliably":[79],"estimating":[80],"P-values.":[82],"RESULTS:":[83],"The":[84],"P-value":[86,177],"estimator":[87],"has":[88],"been":[89],"enriched":[90],"with":[91,135],"additional":[92],"functionalities":[93],"made":[96],"available":[97],"general":[100],"community":[101],"through":[102],"public":[104],"website":[105],"web":[107,140],"service,":[108],"called":[109],"EPEPT.":[110],"means":[112],"that":[113,132],"EPEPT":[115,151,167,184],"routines":[116],"can":[117,133,147,185,200],"accessed":[119],"not":[120],"only":[121],"via":[122],"website,":[124],"but":[125],"also":[126],"programmatically":[127],"using":[128],"any":[129],"programming":[130,145],"language":[131],"interact":[134],"web.":[137],"Examples":[138],"service":[141],"clients":[142],"in":[143,160,204],"multiple":[144],"languages":[146],"downloaded.":[149,187],"Additionally,":[150],"accepts":[152],"data":[153],"various":[155],"experiment":[157,165],"types":[158,166,190],"biology.":[162],"For":[163],"these":[164],"first":[168],"computes":[169],"values":[172],"then":[174],"performs":[175],"estimation.":[178],"Finally,":[179],"source":[181],"code":[182],"CONCLUSIONS:":[188],"Different":[189],"users,":[192],"such":[193],"as":[194],"biologists,":[195],"bioinformaticians":[196],"software":[198],"engineers,":[199],"use":[201],"method":[203],"appropriate":[206],"simple":[208],"way.":[209]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":1}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
