{"id":"https://openalex.org/W2160668718","doi":"https://doi.org/10.1186/1471-2105-12-387","title":"Biblio-MetReS: A bibliometric network reconstruction application and server","display_name":"Biblio-MetReS: A bibliometric network reconstruction application and server","publication_year":2011,"publication_date":"2011-10-05","ids":{"openalex":"https://openalex.org/W2160668718","doi":"https://doi.org/10.1186/1471-2105-12-387","mag":"2160668718","pmid":"https://pubmed.ncbi.nlm.nih.gov/21975133"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-387","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-387","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-387","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-387","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072002693","display_name":"Ana Usi\u00e9","orcid":"https://orcid.org/0000-0002-3364-9434"},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]},{"id":"https://openalex.org/I4210133944","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de Lleida","ror":"https://ror.org/03mfyme49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210133944","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Anabel Usi\u00e9","raw_affiliation_strings":["Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av, Jaume II n\u00b069, 25001 Lleida, Spain","Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain","Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av, Jaume II n\u00b069, 25001 Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328","https://openalex.org/I4210133944"]},{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023911818","display_name":"Hiren Karathia","orcid":"https://orcid.org/0000-0003-3607-6552"},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]},{"id":"https://openalex.org/I4210133944","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de Lleida","ror":"https://ror.org/03mfyme49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210133944","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Hiren Karathia","raw_affiliation_strings":["Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Montserrat Roig n\u00b02, 25008, Lleida, Spain","Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Montserrat Roig n\u00b02, 25008, Lleida, Spain","institution_ids":["https://openalex.org/I4210133944","https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328","https://openalex.org/I4210133944"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051533335","display_name":"Ivan Teixid\u00f3","orcid":"https://orcid.org/0000-0002-4880-9031"},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ivan Teixid\u00f3","raw_affiliation_strings":["Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av. Jaume II n\u00b069, 25001, Lleida, Spain","Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av. Jaume II n\u00b069, 25001, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000012281","display_name":"Joan Valls","orcid":"https://orcid.org/0000-0002-4806-7568"},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]},{"id":"https://openalex.org/I4210133944","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de Lleida","ror":"https://ror.org/03mfyme49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210133944","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Joan Valls","raw_affiliation_strings":["Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Montserrat Roig n\u00b02, 25008, Lleida, Spain","Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Montserrat Roig n\u00b02, 25008, Lleida, Spain","institution_ids":["https://openalex.org/I4210133944","https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328","https://openalex.org/I4210133944"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029478909","display_name":"Xavier Faus","orcid":null},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Xavier Faus","raw_affiliation_strings":["Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av. Jaume II n\u00b069, 25001, Lleida, Spain","Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av. Jaume II n\u00b069, 25001, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020840486","display_name":"Rui Alves","orcid":"https://orcid.org/0000-0002-8112-5184"},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]},{"id":"https://openalex.org/I4210133944","display_name":"Instituto de Investigaci\u00f3n Biom\u00e9dica de Lleida","ror":"https://ror.org/03mfyme49","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210133944","https://openalex.org/I4387153040"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Rui Alves","raw_affiliation_strings":["Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Montserrat Roig n\u00b02, 25008, Lleida, Spain","Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Montserrat Roig n\u00b02, 25008, Lleida, Spain","institution_ids":["https://openalex.org/I4210133944","https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department de Ci\u00e8ncies M\u00e8diques B\u00e0siques & IRBLleida, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328","https://openalex.org/I4210133944"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070309620","display_name":"Francesc Solsona","orcid":"https://orcid.org/0000-0002-4830-9184"},"institutions":[{"id":"https://openalex.org/I15766328","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24","country_code":"ES","type":"education","lineage":["https://openalex.org/I15766328"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Francesc Solsona","raw_affiliation_strings":["Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av. Jaume II n\u00b069, 25001, Lleida, Spain","Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Av. Jaume II n\u00b069, 25001, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]},{"raw_affiliation_string":"Department d'Inform\u00e0tica i Enginyeria Industrial, Universitat de Lleida, Lleida, Spain","institution_ids":["https://openalex.org/I15766328"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5020840486","https://openalex.org/A5070309620"],"corresponding_institution_ids":["https://openalex.org/I15766328","https://openalex.org/I4210133944"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.4426,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.81476349,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"12","issue":"1","first_page":"387","last_page":"387"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.821399986743927,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.821399986743927,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.12080000340938568,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.007199999876320362,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8230064511299133},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6817375421524048},{"id":"https://openalex.org/keywords/user-friendly","display_name":"User Friendly","score":0.5821315050125122},{"id":"https://openalex.org/keywords/string","display_name":"String (physics)","score":0.49348604679107666},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.47611695528030396},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.44273319840431213},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.39028000831604004}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8230064511299133},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6817375421524048},{"id":"https://openalex.org/C61437842","wikidata":"https://www.wikidata.org/wiki/Q281291","display_name":"User Friendly","level":2,"score":0.5821315050125122},{"id":"https://openalex.org/C157486923","wikidata":"https://www.wikidata.org/wiki/Q1376436","display_name":"String (physics)","level":2,"score":0.49348604679107666},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.47611695528030396},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.44273319840431213},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.39028000831604004},{"id":"https://openalex.org/C62520636","wikidata":"https://www.wikidata.org/wiki/Q944","display_name":"Quantum mechanics","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015706","descriptor_name":"Bibliometrics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-12-387","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-387","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-387","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21975133","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21975133","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:dnet:raudl_______::68faaa2bde14594977eb31b18cabdd21","is_oa":true,"landing_page_url":"http://hdl.handle.net/10459.1/45586","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:3ad67113a33c4262919f18fa9a6e4989","is_oa":true,"landing_page_url":"https://doaj.org/article/3ad67113a33c4262919f18fa9a6e4989","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 12, Iss 1, p 387 (2011)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2239921","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3228545","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-387","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-387","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-387","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"id":"https://metadata.un.org/sdg/4","display_name":"Quality Education"}],"awards":[{"id":"https://openalex.org/G2186056989","display_name":null,"funder_award_id":"2009SGR145","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"},{"id":"https://openalex.org/G4878710758","display_name":null,"funder_award_id":"CSD-2007-00050","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"},{"id":"https://openalex.org/G4998278097","display_name":null,"funder_award_id":"2009SGR809","funder_id":"https://openalex.org/F4320321505","funder_display_name":"Generalitat de Catalunya"},{"id":"https://openalex.org/G6190739589","display_name":null,"funder_award_id":"BFU2010-17704","funder_id":"https://openalex.org/F4320322930","funder_display_name":"Ministerio de Ciencia e Innovaci\u00f3n"}],"funders":[{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320322930","display_name":"Ministerio de Ciencia e Innovaci\u00f3n","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320324459","display_name":"Funda\u00e7\u00e3o Luso-Americana para o Desenvolvimento","ror":"https://ror.org/03jgmp057"},{"id":"https://openalex.org/F4320325745","display_name":"Universitat de Lleida","ror":"https://ror.org/050c3cw24"},{"id":"https://openalex.org/F4320334830","display_name":"Ag\u00e8ncia de Gesti\u00f3 d'Ajuts Universitaris i de Recerca","ror":"https://ror.org/01n4pqe45"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2160668718.pdf","grobid_xml":"https://content.openalex.org/works/W2160668718.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W42742550","https://openalex.org/W1523095068","https://openalex.org/W1552912989","https://openalex.org/W1923384484","https://openalex.org/W1981933378","https://openalex.org/W1987522618","https://openalex.org/W2013469333","https://openalex.org/W2024925634","https://openalex.org/W2027943492","https://openalex.org/W2044514479","https://openalex.org/W2050453845","https://openalex.org/W2065108361","https://openalex.org/W2073613683","https://openalex.org/W2077039118","https://openalex.org/W2097898123","https://openalex.org/W2100751507","https://openalex.org/W2101727078","https://openalex.org/W2104882228","https://openalex.org/W2108456065","https://openalex.org/W2111776022","https://openalex.org/W2120535580","https://openalex.org/W2120736575","https://openalex.org/W2122194007","https://openalex.org/W2124176947","https://openalex.org/W2126690563","https://openalex.org/W2127603354","https://openalex.org/W2133431243","https://openalex.org/W2134756663","https://openalex.org/W2135805255","https://openalex.org/W2140277449","https://openalex.org/W2142741334","https://openalex.org/W2147585745","https://openalex.org/W2148395543","https://openalex.org/W2152482800","https://openalex.org/W2157641143","https://openalex.org/W2158040974","https://openalex.org/W2166521913","https://openalex.org/W2171283231","https://openalex.org/W2418548049","https://openalex.org/W2463500981","https://openalex.org/W4237735355"],"related_works":["https://openalex.org/W4244334873","https://openalex.org/W2170356069","https://openalex.org/W2069772129","https://openalex.org/W2781949608","https://openalex.org/W2072333543","https://openalex.org/W4213212078","https://openalex.org/W2139742209","https://openalex.org/W3119811267","https://openalex.org/W2112788825","https://openalex.org/W630825054"],"abstract_inverted_index":{"BACKGROUND:":[0],"Reconstruction":[1],"of":[2,10,15,19,35,37,52,55,72,82,106,127,134,151,166,219,228],"genes":[3,83],"and/or":[4],"protein":[5],"networks":[6,121,218],"from":[7,146,162,204,221],"automated":[8,156],"analysis":[9,31,133],"the":[11,16,49,69,80,149,152],"literature":[12],"is":[13,88,159,176,197],"one":[14],"current":[17],"targets":[18],"text":[20,136],"mining":[21],"in":[22,85],"biomedical":[23],"research.":[24],"Some":[25],"user-friendly":[26,108],"tools":[27,41],"already":[28],"perform":[29],"this":[30],"on":[32,76],"precompiled":[33],"databases":[34],"abstracts":[36],"scientific":[38,56,73,229],"papers.":[39],"Other":[40],"allow":[42],"expert":[43],"users":[44],"to":[45,59,104,125,210,215,225],"elaborate":[46],"and":[47,78,98,102,178,188,194],"analyze":[48],"full":[50,135],"content":[51],"a":[53,95],"corpus":[54],"documents.":[57,230],"However,":[58,169],"our":[60],"knowledge,":[61],"no":[62],"user":[63,129],"friendly":[64,130],"tool":[65,175],"that":[66,112,122,144,200],"simultaneously":[67],"analyzes":[68],"latest":[70],"set":[71,81,227],"documents":[74,87,137],"available":[75],"line":[77],"reconstructs":[79],"referenced":[84],"those":[86,105,126,143],"available.":[89],"RESULTS:":[90],"This":[91],"article":[92],"presents":[93],"such":[94],"tool,":[96],"Biblio-MetReS,":[97],"compares":[99],"its":[100,170],"functioning":[101],"results":[103],"other":[107,128],"applications":[109],"(iHOP,":[110],"STRING)":[111],"are":[113,123],"widely":[114,192],"used.":[115],"Under":[116],"similar":[117],"conditions,":[118],"Biblio-MetReS":[119,196],"creates":[120],"comparable":[124],"tools.":[131],"Furthermore,":[132],"provides":[138,207],"more":[139,191],"complete":[140,164],"reconstructions":[141,165],"than":[142],"result":[145],"using":[147],"only":[148],"abstract":[150],"document.":[153],"CONCLUSIONS:":[154],"Literature-based":[155],"network":[157],"reconstruction":[158],"still":[160],"far":[161],"providing":[163],"molecular":[167],"networks.":[168],"value":[171],"as":[172,182],"an":[173,198,208,222],"auxiliary":[174],"high":[177],"it":[179],"will":[180],"increase":[181],"standards":[183],"for":[184,213],"reporting":[185],"biological":[186],"entities":[187],"relationships":[189],"become":[190],"accepted":[193],"enforced.":[195],"application":[199],"can":[201],"be":[202],"downloaded":[203],"http://metres.udl.cat/.":[205],"It":[206],"easy":[209],"use":[211],"environment":[212],"researchers":[214],"reconstruct":[216],"their":[217],"interest":[220],"always":[223],"up":[224],"date":[226]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
