{"id":"https://openalex.org/W2142996167","doi":"https://doi.org/10.1186/1471-2105-12-136","title":"ArrayInitiative - a tool that simplifies creating custom Affymetrix CDFs","display_name":"ArrayInitiative - a tool that simplifies creating custom Affymetrix CDFs","publication_year":2011,"publication_date":"2011-05-06","ids":{"openalex":"https://openalex.org/W2142996167","doi":"https://doi.org/10.1186/1471-2105-12-136","mag":"2142996167","pmid":"https://pubmed.ncbi.nlm.nih.gov/21548938"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-12-136","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-136","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-136","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-136","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Christopher C Overall","orcid":null},"institutions":[{"id":"https://openalex.org/I102149020","display_name":"University of North Carolina at Charlotte","ror":"https://ror.org/04dawnj30","country_code":"US","type":"education","lineage":["https://openalex.org/I102149020"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Christopher C Overall","raw_affiliation_strings":["Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, NC 28223-0001, USA","Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, NC 28223-0001, USA","institution_ids":["https://openalex.org/I102149020"]},{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA","institution_ids":["https://openalex.org/I102149020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046443001","display_name":"Denis Carr","orcid":null},"institutions":[{"id":"https://openalex.org/I4210102456","display_name":"Accelerated Medical Diagnostics (United States)","ror":"https://ror.org/00z0kkz74","country_code":"US","type":"company","lineage":["https://openalex.org/I4210102456"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D Andrew Carr","raw_affiliation_strings":["Accelerated Technology Laboratories, Inc., 496 Holly Grove School Rd., West End, NC, 27376, USA","Accelerated Technology Laboratories, Inc., USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Accelerated Technology Laboratories, Inc., 496 Holly Grove School Rd., West End, NC, 27376, USA","institution_ids":["https://openalex.org/I4210102456"]},{"raw_affiliation_string":"Accelerated Technology Laboratories, Inc., USA","institution_ids":["https://openalex.org/I4210102456"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010907779","display_name":"Ehsan Tabari","orcid":"https://orcid.org/0000-0002-9462-402X"},"institutions":[{"id":"https://openalex.org/I102149020","display_name":"University of North Carolina at Charlotte","ror":"https://ror.org/04dawnj30","country_code":"US","type":"education","lineage":["https://openalex.org/I102149020"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ehsan S Tabari","raw_affiliation_strings":["Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, 9201 University City Blvd., Charlotte, NC, 28223-0001, USA","Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, 9201 University City Blvd., Charlotte, NC, 28223-0001, USA","institution_ids":["https://openalex.org/I102149020"]},{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA","institution_ids":["https://openalex.org/I102149020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070464408","display_name":"Kevin J. Thompson","orcid":"https://orcid.org/0000-0002-9348-4686"},"institutions":[{"id":"https://openalex.org/I102149020","display_name":"University of North Carolina at Charlotte","ror":"https://ror.org/04dawnj30","country_code":"US","type":"education","lineage":["https://openalex.org/I102149020"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin J Thompson","raw_affiliation_strings":["Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, 9201 University City Blvd., Charlotte, NC, 28223-0001, USA","Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, 9201 University City Blvd., Charlotte, NC, 28223-0001, USA","institution_ids":["https://openalex.org/I102149020"]},{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA","institution_ids":["https://openalex.org/I102149020"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5111578559","display_name":"Jennifer W Weller","orcid":null},"institutions":[{"id":"https://openalex.org/I102149020","display_name":"University of North Carolina at Charlotte","ror":"https://ror.org/04dawnj30","country_code":"US","type":"education","lineage":["https://openalex.org/I102149020"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jennifer W Weller","raw_affiliation_strings":["Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, 9201 University City Blvd., Charlotte, NC, 28223-0001, USA","Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, 9201 University City Blvd., Charlotte, NC, 28223-0001, USA","institution_ids":["https://openalex.org/I102149020"]},{"raw_affiliation_string":"Department of Bioinformatics and Genomics, University of North Carolina - Charlotte, Charlotte, USA","institution_ids":["https://openalex.org/I102149020"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I102149020"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.133,"has_fulltext":true,"cited_by_count":2,"citation_normalized_percentile":{"value":0.54358529,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":94},"biblio":{"volume":"12","issue":"1","first_page":"136","last_page":"136"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9674999713897705,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9674999713897705,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.009499999694526196,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11213","display_name":"Genomic variations and chromosomal abnormalities","score":0.0032999999821186066,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5994986295700073},{"id":"https://openalex.org/keywords/r-package","display_name":"R package","score":0.49734118580818176},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4660051763057709},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3841129541397095},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.25219225883483887},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.23168706893920898},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1506597399711609},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08388668298721313},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.06557482481002808}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5994986295700073},{"id":"https://openalex.org/C2984074130","wikidata":"https://www.wikidata.org/wiki/Q73539779","display_name":"R package","level":2,"score":0.49734118580818176},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4660051763057709},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3841129541397095},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.25219225883483887},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.23168706893920898},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1506597399711609},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08388668298721313},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.06557482481002808}],"mesh":[{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000230","descriptor_name":"Adenocarcinoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008175","descriptor_name":"Lung Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015345","descriptor_name":"Oligonucleotide Probes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015345","descriptor_name":"Oligonucleotide Probes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015345","descriptor_name":"Oligonucleotide Probes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D046228","descriptor_name":"Microarray Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D046228","descriptor_name":"Microarray Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D046228","descriptor_name":"Microarray Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-12-136","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-136","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-136","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21548938","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21548938","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:9c9bea70a6404cf48919b84819a069d8","is_oa":true,"landing_page_url":"https://doaj.org/article/9c9bea70a6404cf48919b84819a069d8","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 12, Iss 1, p 136 (2011)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3113937","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3113937","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-12-136","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-12-136","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-12-136","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure","score":0.47999998927116394}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2142996167.pdf","grobid_xml":"https://content.openalex.org/works/W2142996167.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1484872771","https://openalex.org/W1557844666","https://openalex.org/W1609815973","https://openalex.org/W1708068686","https://openalex.org/W1824017618","https://openalex.org/W1968610711","https://openalex.org/W1973614663","https://openalex.org/W1986432116","https://openalex.org/W2020511002","https://openalex.org/W2035783504","https://openalex.org/W2038030030","https://openalex.org/W2053667727","https://openalex.org/W2097413644","https://openalex.org/W2100639130","https://openalex.org/W2101929102","https://openalex.org/W2105485923","https://openalex.org/W2107665951","https://openalex.org/W2110697718","https://openalex.org/W2122461960","https://openalex.org/W2135827569","https://openalex.org/W2141009231","https://openalex.org/W2143364665","https://openalex.org/W2143953211","https://openalex.org/W2144120272","https://openalex.org/W2146007051","https://openalex.org/W2148512171","https://openalex.org/W2153348030","https://openalex.org/W2160697532","https://openalex.org/W2170989872","https://openalex.org/W2914845886"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2390279801","https://openalex.org/W2358668433","https://openalex.org/W2376932109","https://openalex.org/W2001405890","https://openalex.org/W2382290278","https://openalex.org/W2350741829","https://openalex.org/W2530322880","https://openalex.org/W1596801655","https://openalex.org/W2359140296"],"abstract_inverted_index":{"BACKGROUND:":[0],"Probes":[1],"on":[2,272],"a":[3,6,10,53,79,117,129,169,176,251],"microarray":[4,31,293],"represent":[5],"frozen":[7],"view":[8],"of":[9,67,92,106,142,151,208,213],"genome":[11],"and":[12,109,121,156,174,196,206,267],"are":[13,34,280],"quickly":[14],"outdated":[15],"when":[16,28],"new":[17,247],"sequencing":[18],"studies":[19],"extend":[20],"our":[21],"knowledge,":[22],"resulting":[23],"in":[24,250,303],"significant":[25,80],"measurement":[26],"error":[27],"analyzing":[29],"any":[30,181,193],"experiment.":[32],"There":[33],"several":[35],"bioinformatics":[36],"approaches":[37,86],"to":[38,64,103,114,184,245,263,283],"improve":[39],"probe":[40,107,166,190,273],"assignments,":[41],"but":[42,225],"without":[43,73],"in-house":[44],"programming":[45],"expertise,":[46],"standardizing":[47],"these":[48,291],"custom":[49,123,140,177,277],"array":[50,124,145,153,163,171,178,182,194,248,278],"specifications":[51,279],"as":[52,57,204,226,300],"usable":[54],"file":[55,70,89,157],"(e.g.":[56],"Affymetrix":[58,217],"CDFs)":[59],"is":[60,78,90,128],"difficult,":[61],"owing":[62],"mostly":[63],"the":[65,68,93,152,189,201,216,276,284],"complexity":[66],"specification":[69,154,183,195],"format.":[71],"However,":[72],"correctly":[74,138],"standardized":[75],"files":[76],"there":[77],"barrier":[81],"for":[82,96,119,136,168,192,238],"testing":[83],"competing":[84,265],"analysis":[85,110,268],"since":[87],"this":[88],"one":[91],"required":[94],"inputs":[95],"many":[97],"commonly":[98],"used":[99],"algorithms.":[100],"The":[101,210],"need":[102],"test":[104,264],"combinations":[105],"assignments":[108],"algorithms":[111],"led":[112],"us":[113],"develop":[115],"ArrayInitiative,":[116],"tool":[118],"creating":[120,137],"managing":[122],"specifications.":[125],"RESULTS:":[126],"ArrayInitiative":[127,214,242],"standalone,":[130],"cross-platform,":[131],"rich":[132],"client":[133],"desktop":[134],"application":[135],"formatted,":[139],"versions":[141],"manufacturer-provided":[143],"(default)":[144],"specifications,":[146,164,249],"requiring":[147],"only":[148],"minimal":[149],"knowledge":[150],"rules":[155],"formats.":[158],"Users":[159],"can":[160,289],"import":[161,165,175],"default":[162,170],"sequences":[167,191],"specification,":[172,179],"design":[173,266],"export":[180,188],"multiple":[185],"output":[186],"formats,":[187],"browse":[197],"high-level":[198],"information":[199],"about":[200],"microarray,":[202],"such":[203,299],"version":[205],"number":[207],"probes.":[209],"initial":[211],"release":[212],"supports":[215],"3'":[218],"IVT":[219],"expression":[220],"arrays":[221],"we":[222,231],"currently":[223],"analyze,":[224],"an":[227],"open":[228],"source":[229],"application,":[230],"hope":[232],"that":[233,270],"others":[234],"will":[235],"contribute":[236],"modules":[237],"other":[239],"platforms.":[240],"CONCLUSIONS:":[241],"allows":[243],"researchers":[244,288],"create":[246],"standard":[252,286],"format,":[253,287],"based":[254],"upon":[255],"their":[256],"own":[257],"requirements.":[258],"This":[259],"makes":[260],"it":[261],"easier":[262],"strategies":[269],"depend":[271],"definitions.":[274],"Since":[275],"easily":[281],"exported":[282],"manufacturer's":[285],"analyze":[290],"customized":[292],"experiments":[294],"using":[295],"established":[296],"software":[297],"tools,":[298],"those":[301],"available":[302],"Bioconductor.":[304]},"counts_by_year":[{"year":2015,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}