{"id":"https://openalex.org/W2145284532","doi":"https://doi.org/10.1186/1471-2105-11-s7-s8","title":"Integrating diverse biological and computational sources for reliable protein-protein interactions","display_name":"Integrating diverse biological and computational sources for reliable protein-protein interactions","publication_year":2010,"publication_date":"2010-10-01","ids":{"openalex":"https://openalex.org/W2145284532","doi":"https://doi.org/10.1186/1471-2105-11-s7-s8","mag":"2145284532","pmid":"https://pubmed.ncbi.nlm.nih.gov/21106130"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s7-s8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s7-s8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S7-S8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S7-S8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100340964","display_name":"Min Wu","orcid":"https://orcid.org/0000-0003-0977-3600"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Min Wu","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University, Singapore. wumi0002@ntu.edu.sg","School of Computer Engineering, Nanyang Technological University,,Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University, Singapore. wumi0002@ntu.edu.sg","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University,,Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100418684","display_name":"Xiaoli Li","orcid":"https://orcid.org/0000-0002-0762-6562"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Xiaoli Li","raw_affiliation_strings":["Institute for Infocomm Research, 1 Fusionopolis Way, Singapore","Inst. for Infocomm Res., Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, 1 Fusionopolis Way, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Inst. for Infocomm Res., Singapore","institution_ids":["https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056590153","display_name":"Hon Nian Chua","orcid":null},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]},{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hon Nian Chua","raw_affiliation_strings":["Harvard University, 250 Longwood Avenue, SGMB-322, Boston, USA","Harvard University; Boston USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Harvard University, 250 Longwood Avenue, SGMB-322, Boston, USA","institution_ids":["https://openalex.org/I111088046","https://openalex.org/I136199984"]},{"raw_affiliation_string":"Harvard University; Boston USA","institution_ids":["https://openalex.org/I136199984"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027208445","display_name":"Chee Keong Kwoh","orcid":"https://orcid.org/0000-0002-8547-6387"},"institutions":[{"id":"https://openalex.org/I172675005","display_name":"Nanyang Technological University","ror":"https://ror.org/02e7b5302","country_code":"SG","type":"education","lineage":["https://openalex.org/I172675005"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Chee-Keong Kwoh","raw_affiliation_strings":["School of Computer Engineering, Nanyang Technological University, Singapore","School of Computer Engineering, Nanyang Technological University,,Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University, Singapore","institution_ids":["https://openalex.org/I172675005"]},{"raw_affiliation_string":"School of Computer Engineering, Nanyang Technological University,,Singapore","institution_ids":["https://openalex.org/I172675005"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090171111","display_name":"See-Kiong Ng","orcid":"https://orcid.org/0000-0001-6565-7511"},"institutions":[{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"See-Kiong Ng","raw_affiliation_strings":["Institute for Infocomm Research, 1 Fusionopolis Way, Singapore","Inst. for Infocomm Res., Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research, 1 Fusionopolis Way, Singapore","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Inst. for Infocomm Res., Singapore","institution_ids":["https://openalex.org/I3005327000"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100418684"],"corresponding_institution_ids":["https://openalex.org/I3005327000"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.7467,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.70031905,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"11","issue":"S7","first_page":"S8","last_page":"S8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9872999787330627,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.005499999970197678,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.0010999999940395355,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.8110792636871338},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7509972453117371},{"id":"https://openalex.org/keywords/false-positives-and-false-negatives","display_name":"False positives and false negatives","score":0.5736091136932373},{"id":"https://openalex.org/keywords/benchmark","display_name":"Benchmark (surveying)","score":0.5525937080383301},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5242074728012085},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4891524612903595},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.4716966152191162},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.42442411184310913},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3923609256744385},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38119709491729736},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.28524577617645264},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1721801459789276}],"concepts":[{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.8110792636871338},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7509972453117371},{"id":"https://openalex.org/C112789634","wikidata":"https://www.wikidata.org/wiki/Q18207010","display_name":"False positives and false negatives","level":3,"score":0.5736091136932373},{"id":"https://openalex.org/C185798385","wikidata":"https://www.wikidata.org/wiki/Q1161707","display_name":"Benchmark (surveying)","level":2,"score":0.5525937080383301},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5242074728012085},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4891524612903595},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.4716966152191162},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.42442411184310913},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3923609256744385},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38119709491729736},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.28524577617645264},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1721801459789276},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.0},{"id":"https://openalex.org/C13280743","wikidata":"https://www.wikidata.org/wiki/Q131089","display_name":"Geodesy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-s7-s8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s7-s8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S7-S8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21106130","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21106130","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:dash.harvard.edu:1/41555734","is_oa":true,"landing_page_url":"http://nrs.harvard.edu/urn-3:HUL.InstRepos:41555734","pdf_url":null,"source":{"id":"https://openalex.org/S4306401540","display_name":"Digital Access to Scholarship at Harvard (DASH) (Harvard University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2957691","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2957691","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s7-s8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s7-s8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S7-S8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145284532.pdf","grobid_xml":"https://content.openalex.org/works/W2145284532.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W1488129458","https://openalex.org/W1576520375","https://openalex.org/W1918391659","https://openalex.org/W1965990772","https://openalex.org/W1986512768","https://openalex.org/W1987363726","https://openalex.org/W1990101076","https://openalex.org/W2006124679","https://openalex.org/W2013520054","https://openalex.org/W2040411864","https://openalex.org/W2050721857","https://openalex.org/W2053906518","https://openalex.org/W2080182143","https://openalex.org/W2094197852","https://openalex.org/W2099862356","https://openalex.org/W2099913238","https://openalex.org/W2101330776","https://openalex.org/W2107710781","https://openalex.org/W2112555761","https://openalex.org/W2113654464","https://openalex.org/W2116117181","https://openalex.org/W2116447934","https://openalex.org/W2123280311","https://openalex.org/W2125920354","https://openalex.org/W2127351311","https://openalex.org/W2128049108","https://openalex.org/W2130687290","https://openalex.org/W2136957665","https://openalex.org/W2139259976","https://openalex.org/W2144344817","https://openalex.org/W2144810924","https://openalex.org/W2149310258","https://openalex.org/W2151326548","https://openalex.org/W2153161570","https://openalex.org/W2156537287","https://openalex.org/W2156909104","https://openalex.org/W2160232999","https://openalex.org/W2163485494","https://openalex.org/W2163736554","https://openalex.org/W2164071427","https://openalex.org/W2168708357","https://openalex.org/W2172049947","https://openalex.org/W4231056502","https://openalex.org/W4255852734","https://openalex.org/W4255855797"],"related_works":["https://openalex.org/W2980235726","https://openalex.org/W2952858462","https://openalex.org/W2070589300","https://openalex.org/W2472056907","https://openalex.org/W4319453009","https://openalex.org/W2166897781","https://openalex.org/W2128036243","https://openalex.org/W3135226178","https://openalex.org/W2145284532","https://openalex.org/W2301561577"],"abstract_inverted_index":{"BACKGROUND:":[0],"Protein-protein":[1],"interactions":[2,55,62],"(PPIs)":[3],"play":[4],"important":[5],"roles":[6],"in":[7,161],"various":[8,194],"cellular":[9],"processes.":[10],"However,":[11],"the":[12,26,30,40,102,107,126,190],"low":[13],"quality":[14],"of":[15,29,46,82,185,192,199],"current":[16],"PPI":[17,47,146],"data":[18,42,200],"detected":[19,162],"from":[20],"high-throughput":[21],"screening":[22],"techniques":[23],"has":[24],"diminished":[25],"potential":[27],"usefulness":[28],"data.":[31],"We":[32,138],"need":[33],"to":[34,38,50,75,98,130],"develop":[35],"a":[36,71],"method":[37,74,155,176],"address":[39],"high":[41],"noise":[43],"and":[44,58,79,133,164,196,201],"incompleteness":[45],"data,":[48],"namely,":[49],"filter":[51],"out":[52],"inaccurate":[53],"protein":[54,61,108],"(false":[56,63],"positives)":[57],"predict":[59],"putative":[60],"negatives).":[64],"RESULTS:":[65],"In":[66],"this":[67],"paper,":[68],"we":[69],"proposed":[70,154,175],"novel":[72,170],"two-step":[73],"integrate":[76],"diverse":[77],"biological":[78,113,195],"computational":[80,115,197],"sources":[81,198],"supporting":[83],"evidence":[84,116,187],"for":[85,111],"reliable":[86,135,172],"PPIs.":[87,173],"The":[88,118,148],"first":[89],"step,":[90,120],"interaction":[91,121],"binning":[92],"or":[93,114,123],"InterBIN,":[94],"groups":[95],"PPIs":[96,163],"together":[97],"more":[99],"accurately":[100],"estimate":[101],"likelihood":[103],"(Bin-Confidence":[104],"score)":[105],"that":[106,152],"pairs":[109],"interact":[110],"each":[112,184],"source.":[117],"second":[119],"classification":[122],"InterCLASS,":[124],"integrates":[125],"collected":[127],"Bin-Confidence":[128],"scores":[129],"build":[131],"classifiers":[132],"identify":[134,165],"interactions.":[136],"CONCLUSIONS:":[137],"performed":[139,178],"comprehensive":[140],"experiments":[141],"on":[142],"two":[143],"benchmark":[144],"yeast":[145],"datasets.":[147],"experimental":[149],"results":[150],"showed":[151],"our":[153],"can":[156],"effectively":[157],"eliminate":[158],"false":[159,166],"positives":[160],"negatives":[167],"by":[168],"predicting":[169],"yet":[171],"Our":[174],"also":[177],"significantly":[179],"better":[180],"than":[181],"merely":[182],"using":[183],"individual":[186],"sources,":[188],"illustrating":[189],"importance":[191],"integrating":[193],"evidence.":[202]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
