{"id":"https://openalex.org/W2044453906","doi":"https://doi.org/10.1186/1471-2105-11-s5-p9","title":"Extracting drug-drug interactions from biomedical texts","display_name":"Extracting drug-drug interactions from biomedical texts","publication_year":2010,"publication_date":"2010-10-01","ids":{"openalex":"https://openalex.org/W2044453906","doi":"https://doi.org/10.1186/1471-2105-11-s5-p9","mag":"2044453906"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s5-p9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s5-p9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S5-P9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S5-P9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079791321","display_name":"Isabel Segura-B\u00e9dmar","orcid":"https://orcid.org/0000-0002-7810-2360"},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Isabel Segura-Bedmar","raw_affiliation_strings":["Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, 28921, Spain","Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, Spain#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, 28921, Spain","institution_ids":["https://openalex.org/I50357001"]},{"raw_affiliation_string":"Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, Spain#TAB#","institution_ids":["https://openalex.org/I50357001"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009969418","display_name":"Paloma Mart\u0131\u0301nez","orcid":"https://orcid.org/0000-0003-3013-3771"},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Paloma Mart\u00ednez","raw_affiliation_strings":["Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, 28921, Spain","Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, Spain#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, 28921, Spain","institution_ids":["https://openalex.org/I50357001"]},{"raw_affiliation_string":"Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, Spain#TAB#","institution_ids":["https://openalex.org/I50357001"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5040575852","display_name":"C\u00e9sar de Pablo-S\u00e1nchez","orcid":null},"institutions":[{"id":"https://openalex.org/I50357001","display_name":"Universidad Carlos III de Madrid","ror":"https://ror.org/03ths8210","country_code":"ES","type":"education","lineage":["https://openalex.org/I50357001"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"C\u00e9sar de Pablo-S\u00e1nchez","raw_affiliation_strings":["Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, 28921, Spain","Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, Spain#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, 28921, Spain","institution_ids":["https://openalex.org/I50357001"]},{"raw_affiliation_string":"Computer Science Department, University Carlos III of Madrid, Legan\u00e9s, Spain#TAB#","institution_ids":["https://openalex.org/I50357001"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5079791321"],"corresponding_institution_ids":["https://openalex.org/I50357001"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.2402,"has_fulltext":true,"cited_by_count":46,"citation_normalized_percentile":{"value":0.87673439,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"11","issue":"S5","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.977400004863739,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.9631999731063843,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.8271164894104004},{"id":"https://openalex.org/keywords/drug-drug-interaction","display_name":"Drug-drug interaction","score":0.6043398380279541},{"id":"https://openalex.org/keywords/health-care","display_name":"Health care","score":0.569284975528717},{"id":"https://openalex.org/keywords/drug-interaction","display_name":"Drug interaction","score":0.4847661852836609},{"id":"https://openalex.org/keywords/health-professionals","display_name":"Health professionals","score":0.4816133379936218},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.4490927457809448},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.4020587205886841},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3541826009750366},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.30228668451309204}],"concepts":[{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.8271164894104004},{"id":"https://openalex.org/C2910466267","wikidata":"https://www.wikidata.org/wiki/Q718753","display_name":"Drug-drug interaction","level":3,"score":0.6043398380279541},{"id":"https://openalex.org/C160735492","wikidata":"https://www.wikidata.org/wiki/Q31207","display_name":"Health care","level":2,"score":0.569284975528717},{"id":"https://openalex.org/C97320921","wikidata":"https://www.wikidata.org/wiki/Q718753","display_name":"Drug interaction","level":3,"score":0.4847661852836609},{"id":"https://openalex.org/C3019806175","wikidata":"https://www.wikidata.org/wiki/Q11974939","display_name":"Health professionals","level":3,"score":0.4816133379936218},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.4490927457809448},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.4020587205886841},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3541826009750366},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.30228668451309204},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C50522688","wikidata":"https://www.wikidata.org/wiki/Q189833","display_name":"Economic growth","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-11-s5-p9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s5-p9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S5-P9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:d7257c5c1a5043e8aebe736efa7cba15","is_oa":true,"landing_page_url":"https://doaj.org/article/d7257c5c1a5043e8aebe736efa7cba15","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss Suppl 5, p P9 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2956402","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2956402","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s5-p9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s5-p9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S5-P9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2044453906.pdf","grobid_xml":"https://content.openalex.org/works/W2044453906.grobid-xml"},"referenced_works_count":1,"referenced_works":["https://openalex.org/W1493270114"],"related_works":["https://openalex.org/W3082755771","https://openalex.org/W4231756108","https://openalex.org/W4238103611","https://openalex.org/W2040338448","https://openalex.org/W2017864558","https://openalex.org/W2256023486","https://openalex.org/W3036090941","https://openalex.org/W4390863931","https://openalex.org/W2137076721","https://openalex.org/W4200502064"],"abstract_inverted_index":{"Background":[0],"A":[1],"drug-drug":[2],"interaction":[3],"(DDI)":[4],"occurs":[5],"when":[6],"one":[7],"drug":[8,20,55,85],"influences":[9],"the":[10,52,77,82,88,92],"level":[11],"or":[12],"activity":[13],"of":[14,19,54,59,71,84,91,104,110],"another":[15],"drug.":[16],"The":[17,108],"detection":[18,53,83],"interactions":[21,32,65],"is":[22,61],"an":[23,101],"important":[24],"research":[25],"area":[26],"in":[27,51,69],"patient":[28],"safety":[29],"since":[30],"these":[31],"can":[33],"become":[34],"very":[35],"dangerous":[36],"and":[37,116],"increase":[38],"health":[39,48,95],"care":[40,49,96],"costs.":[41],"Although":[42],"there":[43],"are":[44,66],"different":[45],"databases":[46],"supporting":[47],"professionals":[50,97],"interactions,":[56],"this":[57],"kind":[58],"resources":[60],"rarely":[62],"complete.":[63],"Drug":[64],"frequently":[67],"reported":[68,106],"journals":[70],"clinical":[72],"pharmacology,":[73],"making":[74],"medical":[75],"literature":[76,93],"most":[78],"effective":[79],"source":[80],"for":[81,113],"interactions.":[86],"However,":[87],"increasing":[89],"volume":[90],"overwhelms":[94],"trying":[98],"to":[99],"keep":[100],"up-to-date":[102],"collection":[103],"all":[105],"DDIs.":[107],"development":[109],"automatic":[111],"methods":[112],"collecting,":[114],"maintaining":[115]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":8}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
