{"id":"https://openalex.org/W2150395696","doi":"https://doi.org/10.1186/1471-2105-11-s4-p20","title":"The HHMI National Genomics Research Initiative at Western Kentucky University","display_name":"The HHMI National Genomics Research Initiative at Western Kentucky University","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W2150395696","doi":"https://doi.org/10.1186/1471-2105-11-s4-p20","mag":"2150395696"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s4-p20","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s4-p20","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/1471-2105-11-s4-p20","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022409988","display_name":"Rodney A. King","orcid":"https://orcid.org/0000-0003-2073-2965"},"institutions":[{"id":"https://openalex.org/I94339441","display_name":"Western Kentucky University","ror":"https://ror.org/0446vnd56","country_code":"US","type":"education","lineage":["https://openalex.org/I94339441"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rodney A King","raw_affiliation_strings":["Department of Biology, Western Kentucky University, Bowling Green, KY, 42101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Western Kentucky University, Bowling Green, KY, 42101, USA","institution_ids":["https://openalex.org/I94339441"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077629794","display_name":"Claire A. Rinehart","orcid":"https://orcid.org/0000-0003-0547-0928"},"institutions":[{"id":"https://openalex.org/I94339441","display_name":"Western Kentucky University","ror":"https://ror.org/0446vnd56","country_code":"US","type":"education","lineage":["https://openalex.org/I94339441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Claire Rinehart","raw_affiliation_strings":["Department of Biology, Western Kentucky University, Bowling Green, KY, 42101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Western Kentucky University, Bowling Green, KY, 42101, USA","institution_ids":["https://openalex.org/I94339441"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5004816558","display_name":"Prasanna Tamarapu Parthasarathy","orcid":null},"institutions":[{"id":"https://openalex.org/I94339441","display_name":"Western Kentucky University","ror":"https://ror.org/0446vnd56","country_code":"US","type":"education","lineage":["https://openalex.org/I94339441"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Prasanna Tamarapu Parthasarathy","raw_affiliation_strings":["Department of Biology, Western Kentucky University, Bowling Green, KY, 42101, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Western Kentucky University, Bowling Green, KY, 42101, USA","institution_ids":["https://openalex.org/I94339441"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5022409988"],"corresponding_institution_ids":["https://openalex.org/I94339441"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1361,"has_fulltext":false,"cited_by_count":2,"citation_normalized_percentile":{"value":0.55430345,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"11","issue":"S4","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9958000183105469,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.914900004863739,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/undergraduate-research","display_name":"Undergraduate research","score":0.6038275957107544},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.5203137397766113},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.5030023455619812},{"id":"https://openalex.org/keywords/alliance","display_name":"Alliance","score":0.43661102652549744},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.43520331382751465},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3375084102153778},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.32053273916244507},{"id":"https://openalex.org/keywords/medical-education","display_name":"Medical education","score":0.29122138023376465},{"id":"https://openalex.org/keywords/political-science","display_name":"Political science","score":0.24001917243003845},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.234632670879364},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.17693659663200378},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15035149455070496},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13078275322914124}],"concepts":[{"id":"https://openalex.org/C2779041819","wikidata":"https://www.wikidata.org/wiki/Q10302238","display_name":"Undergraduate research","level":2,"score":0.6038275957107544},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.5203137397766113},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.5030023455619812},{"id":"https://openalex.org/C2778431023","wikidata":"https://www.wikidata.org/wiki/Q878249","display_name":"Alliance","level":2,"score":0.43661102652549744},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.43520331382751465},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3375084102153778},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.32053273916244507},{"id":"https://openalex.org/C509550671","wikidata":"https://www.wikidata.org/wiki/Q126945","display_name":"Medical education","level":1,"score":0.29122138023376465},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.24001917243003845},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.234632670879364},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.17693659663200378},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15035149455070496},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13078275322914124},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-11-s4-p20","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s4-p20","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:doaj.org/article:83da4d264a7d446fbf8267bab065c0f1","is_oa":true,"landing_page_url":"https://doaj.org/article/83da4d264a7d446fbf8267bab065c0f1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss Suppl 4, p P20 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3290074","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3290074","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s4-p20","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s4-p20","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life below water","id":"https://metadata.un.org/sdg/14","score":0.47999998927116394}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306082","display_name":"Howard Hughes Medical Institute","ror":"https://ror.org/006w34k90"},{"id":"https://openalex.org/F4320311307","display_name":"Western Kentucky University","ror":"https://ror.org/0446vnd56"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":0,"referenced_works":[],"related_works":["https://openalex.org/W3125302265","https://openalex.org/W4242931393","https://openalex.org/W3124763745","https://openalex.org/W2114295463","https://openalex.org/W4233133547","https://openalex.org/W2355569436","https://openalex.org/W369672418","https://openalex.org/W1486494288","https://openalex.org/W2381872080","https://openalex.org/W2041686041"],"abstract_inverted_index":{"Background":[0],"Western":[1],"Kentucky":[2],"University":[3],"is":[4,75,132,247],"a":[5,8,19,104,198],"member":[6],"of":[7,11,106,122,124,192,245,285],"select":[9],"group":[10],"colleges":[12],"and":[13,62,70,79,85,100,111,150,158,171,182,186,204,215,252,273,277],"universities":[14],"chosen":[15],"to":[16,24,33,51,152,159,164,180,210,230,266,280],"participate":[17],"in":[18,282],"national":[20],"science":[21,27],"experiment":[22],"designed":[23],"improve":[25],"undergraduate":[26],"education.":[28],"To":[29],"introduce":[30,52],"freshman":[31,279],"students":[32,93,131,139,225],"authentic":[34],"research,":[35],"the":[36,55,90,98,115,118,125,129,135,155,172,178,190,193,228,235,243,258,283],"Howard":[37],"Hughes":[38],"Medical":[39],"Institute\u2019s":[40],"Science":[41],"Education":[42],"Alliance":[43],"(HHMI":[44],"SEA)":[45],"has":[46,256],"implemented":[47],"an":[48,248,263],"innovative":[49],"program":[50,58,255],"genomics":[53,69],"into":[54],"classroom.":[56],"The":[57,72],"draws":[59],"on":[60,212,222],"themes":[61],"techniques":[63,107],"from":[64,97,207],"biology,":[65,68],"microbiology,":[66],"molecular":[67],"bioinformatics.":[71],"WKU":[73,82,259],"course":[74,169,202],"called":[76],"\u201cGenome":[77],"Discovery":[78,84],"Exploration\u201d":[80],"(GDE);":[81],"Genome":[83],"Exploration":[86],"Program":[87],"[http://bioweb.wku.edu/asp/wkungri/].":[88],"During":[89,134],"fall":[91],"semester,":[92,137,195],"isolate":[94],"bacterial":[95],"viruses":[96,126],"environment":[99],"characterize":[101],"them":[102],"using":[103],"variety":[105],"including":[108],"DNA":[109,120],"analysis":[110],"electron":[112],"microscopy.":[113],"Over":[114],"winter":[116],"break,":[117],"complete":[119],"sequence":[121],"one":[123,205],"isolated":[127],"by":[128],"GDE":[130,138],"determined.":[133],"spring":[136,194],"learn":[140],"how":[141],"use":[142],"computer":[143],"programs":[144,276],"(e.g.":[145],"Consed,":[146],"Glimmer,":[147],"Genemark,":[148],"BLAST":[149],"Phamerator)":[151],"identify":[153,165],"all":[154],"viral":[156],"genes":[157],"make":[160],"genome":[161],"wide":[162],"comparisons":[163],"evolutionary":[166],"relationships.":[167],"All":[168],"participants":[170],"SEA":[173],"staff":[174],"are":[175,220],"connected":[176],"via":[177],"internet":[179],"share":[181],"analyze":[183],"data,":[184],"troubleshoot,":[185],"discuss":[187],"results.":[188],"Near":[189],"end":[191],"HHMI":[196],"hosts":[197],"research":[199,233,267],"symposium":[200],"for":[201,234],"faculty":[203],"student":[206],"each":[208],"institution":[209],"report":[211],"their":[213,232],"discoveries":[214],"experiences.":[216],"As":[217],"unique":[218,254],"phages":[219],"characterized":[221],"campuses":[223],"nationwide,":[224],"will":[226],"have":[227],"opportunity":[229,251],"publish":[231],"broader":[236],"scientific":[237],"community.":[238],"This":[239],"hands-on":[240],"experience":[241],"with":[242],"tools":[244],"Bioinformatics":[246],"outstanding":[249],"training":[250],"this":[253],"helped":[257],"Biology":[260],"Department":[261],"create":[262],"introductory":[264],"pipeline":[265],"experiences":[268],"that":[269],"complements":[270],"our":[271],"existing":[272],"planned":[274],"instructional":[275],"allows":[278],"engage":[281],"thrill":[284],"discovery.":[286]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2016-06-24T00:00:00"}
