{"id":"https://openalex.org/W1974560084","doi":"https://doi.org/10.1186/1471-2105-11-s3-s4","title":"A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages","display_name":"A conformal Bayesian network for classification of Mycobacterium tuberculosis complex lineages","publication_year":2010,"publication_date":"2010-04-01","ids":{"openalex":"https://openalex.org/W1974560084","doi":"https://doi.org/10.1186/1471-2105-11-s3-s4","mag":"1974560084","pmid":"https://pubmed.ncbi.nlm.nih.gov/20438651"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s3-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s3-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S3-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S3-S4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038699800","display_name":"Minoo Aminian","orcid":"https://orcid.org/0000-0001-5204-1566"},"institutions":[{"id":"https://openalex.org/I165799507","display_name":"Rensselaer Polytechnic Institute","ror":"https://ror.org/01rtyzb94","country_code":"US","type":"education","lineage":["https://openalex.org/I165799507"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Minoo Aminian","raw_affiliation_strings":["Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, New York, USA. aminim@cs.rpi.edu","Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, New York, USA. aminim@cs.rpi.edu","institution_ids":["https://openalex.org/I165799507"]},{"raw_affiliation_string":"Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, USA","institution_ids":["https://openalex.org/I165799507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077636001","display_name":"Amina Shabbeer","orcid":"https://orcid.org/0000-0003-2308-3198"},"institutions":[{"id":"https://openalex.org/I165799507","display_name":"Rensselaer Polytechnic Institute","ror":"https://ror.org/01rtyzb94","country_code":"US","type":"education","lineage":["https://openalex.org/I165799507"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amina Shabbeer","raw_affiliation_strings":["Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, New York, USA","Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, New York, USA","institution_ids":["https://openalex.org/I165799507"]},{"raw_affiliation_string":"Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, USA","institution_ids":["https://openalex.org/I165799507"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048876983","display_name":"Kristin P. Bennett","orcid":"https://orcid.org/0000-0002-8782-105X"},"institutions":[{"id":"https://openalex.org/I165799507","display_name":"Rensselaer Polytechnic Institute","ror":"https://ror.org/01rtyzb94","country_code":"US","type":"education","lineage":["https://openalex.org/I165799507"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kristin P Bennett","raw_affiliation_strings":["Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, New York, USA","Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, New York, USA","institution_ids":["https://openalex.org/I165799507"]},{"raw_affiliation_string":"Departments of Mathematical Science and Computer Science, Rensselaer Polytechnic Institute, Troy, USA","institution_ids":["https://openalex.org/I165799507"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5038699800"],"corresponding_institution_ids":["https://openalex.org/I165799507"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":2.0766,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.85582058,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"11","issue":"S3","first_page":"S4","last_page":"S4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.8116000294685364,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.8116000294685364,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T13114","display_name":"Image Processing Techniques and Applications","score":0.03229999914765358,"subfield":{"id":"https://openalex.org/subfields/2214","display_name":"Media Technology"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11303","display_name":"Bayesian Modeling and Causal Inference","score":0.029400000348687172,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis-complex","display_name":"Mycobacterium tuberculosis complex","score":0.8111854195594788},{"id":"https://openalex.org/keywords/typing","display_name":"Typing","score":0.6873837113380432},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5656514167785645},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5569352507591248},{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.5092800855636597},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.5024917125701904},{"id":"https://openalex.org/keywords/lineage","display_name":"Lineage (genetic)","score":0.4559803605079651},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.42402249574661255},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4128366708755493},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.36353522539138794},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15483981370925903},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.13188436627388},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.060509562492370605}],"concepts":[{"id":"https://openalex.org/C2779790121","wikidata":"https://www.wikidata.org/wiki/Q5779917","display_name":"Mycobacterium tuberculosis complex","level":4,"score":0.8111854195594788},{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.6873837113380432},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5656514167785645},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5569352507591248},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.5092800855636597},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.5024917125701904},{"id":"https://openalex.org/C2776817793","wikidata":"https://www.wikidata.org/wiki/Q6553369","display_name":"Lineage (genetic)","level":3,"score":0.4559803605079651},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.42402249574661255},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4128366708755493},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.36353522539138794},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15483981370925903},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.13188436627388},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.060509562492370605},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009169","descriptor_name":"Mycobacterium tuberculosis","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D014376","descriptor_name":"Tuberculosis","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D016172","descriptor_name":"DNA Fingerprinting","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016172","descriptor_name":"DNA Fingerprinting","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016172","descriptor_name":"DNA Fingerprinting","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020071","descriptor_name":"Interspersed Repetitive Sequences","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020071","descriptor_name":"Interspersed Repetitive Sequences","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020071","descriptor_name":"Interspersed Repetitive Sequences","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D021141","descriptor_name":"Nucleic Acid Amplification Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021141","descriptor_name":"Nucleic Acid Amplification Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021141","descriptor_name":"Nucleic Acid Amplification Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D021901","descriptor_name":"DNA, Intergenic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D021901","descriptor_name":"DNA, Intergenic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D021901","descriptor_name":"DNA, Intergenic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-11-s3-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s3-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S3-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20438651","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20438651","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2863063","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2863063","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s3-s4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s3-s4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S3-S4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7200000286102295,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G2005472034","display_name":"Discovering hidden groups across tuberculosis patient and pathogen genotype data","funder_award_id":"5r01lm009731-04","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3645316511","display_name":null,"funder_award_id":"R01 LM009731","funder_id":"https://openalex.org/F4320337372","funder_display_name":"U.S. National Library of Medicine"}],"funders":[{"id":"https://openalex.org/F4320327930","display_name":"Institute Pasteur De Lille","ror":"https://ror.org/05k9skc85"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332162","display_name":"Centers for Disease Control and Prevention","ror":"https://ror.org/042twtr12"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1974560084.pdf","grobid_xml":"https://content.openalex.org/works/W1974560084.grobid-xml"},"referenced_works_count":19,"referenced_works":["https://openalex.org/W1999809115","https://openalex.org/W2005570794","https://openalex.org/W2036722597","https://openalex.org/W2078601735","https://openalex.org/W2088753698","https://openalex.org/W2096162460","https://openalex.org/W2100069291","https://openalex.org/W2105255620","https://openalex.org/W2105637766","https://openalex.org/W2108606970","https://openalex.org/W2110833355","https://openalex.org/W2115317782","https://openalex.org/W2134558351","https://openalex.org/W2147141708","https://openalex.org/W2162912294","https://openalex.org/W2163868664","https://openalex.org/W2165822919","https://openalex.org/W2166379983","https://openalex.org/W4241569127"],"related_works":["https://openalex.org/W2006509003","https://openalex.org/W1733763401","https://openalex.org/W2094282382","https://openalex.org/W2149405576","https://openalex.org/W2112091811","https://openalex.org/W2170300117","https://openalex.org/W2172204738","https://openalex.org/W2949238343","https://openalex.org/W2152388481","https://openalex.org/W2389341737"],"abstract_inverted_index":{"BACKGROUND:":[0],"We":[1],"present":[2],"a":[3],"novel":[4],"conformal":[5],"Bayesian":[6],"network":[7],"(CBN)":[8],"to":[9,80,116,203],"classify":[10],"strains":[11],"of":[12,42,48,52,73,96,99,121,127,146,154,158,163,181,198,217],"Mycobacterium":[13],"tuberculosis":[14,43],"Complex":[15],"(MTBC)":[16],"into":[17,188],"six":[18],"major":[19,119,215],"genetic":[20,196],"lineages":[21,216],"based":[22],"on":[23,91,140],"two":[24],"high-throuput":[25],"biomarkers:":[26],"mycobacterial":[27],"interspersed":[28],"repetitive":[29],"units":[30],"(MIRU)":[31],"and":[32,54,63,71,133,160,169,183,194,209,233,247],"spacer":[33],"oligonucleotide":[34],"typing":[35,130],"(spoligotyping).":[36],"MTBC":[37,85,100,143],"is":[38,78,114],"the":[39,49,69,118,128,191,195,204,240],"causative":[40],"agent":[41],"(TB),":[44],"which":[45],"remains":[46],"one":[47],"leading":[50],"causes":[51],"disease":[53],"morbidity":[55],"world-wide.":[56],"DNA":[57],"fingerprinting":[58],"methods":[59],"such":[60],"as":[61,225],"MIRU":[62,134,168,182],"spoligotyping":[64,132],"are":[65,228],"key":[66],"components":[67],"in":[68,213],"control":[70,104,246],"tracking":[72,232],"modern":[74],"TB.":[75],"RESULTS:":[76],"CBN":[77,113,136,165,201,241],"designed":[79,115],"exploit":[81],"background":[82],"knowledge":[83],"about":[84],"biomarkers.":[86,101],"It":[87],"can":[88,221],"be":[89,110,222],"trained":[90],"large":[92,142],"historical":[93],"TB":[94,103,231,245],"databases":[95],"various":[97],"subsets":[98],"During":[102],"efforts":[105],"not":[106],"all":[107],"biomarkers":[108,227],"may":[109],"available.":[111],"So,":[112],"predict":[117],"lineage":[120],"isolates":[122,149],"genotyped":[123,150],"by":[124,151],"any":[125],"combination":[126],"PCR-based":[129,206],"methods:":[131],"typing.":[135],"achieves":[137,210],"high":[138,211],"accuracy":[139],"three":[141],"collections":[144],"consisting":[145],"over":[147],"34,737":[148],"different":[152],"combinations":[153],"spoligotypes,":[155],"12":[156],"loci":[157,162],"MIRU,":[159],"24":[161],"MIRU.":[164],"captures":[166],"distinct":[167],"spoligotype":[170,184],"signatures":[171,185],"associated":[172],"with":[173],"each":[174],"lineage,":[175],"explaining":[176],"its":[177],"excellent":[178],"performance.":[179],"Visualization":[180],"yields":[186],"insight":[187],"both":[189],"how":[190],"model":[192,242],"works":[193],"diversity":[197],"MTBC.":[199,218],"CONCLUSIONS:":[200],"conforms":[202],"available":[205,243],"biological":[207],"markers":[208],"performance":[212],"identifying":[214],"The":[219],"method":[220],"readily":[223],"extended":[224],"new":[226],"introduced":[229],"for":[230,244],"control.":[234],"An":[235],"online":[236],"tool":[237],"(http://www.cs.rpi.edu/~bennek/tbinsight/tblineage)":[238],"makes":[239],"research":[248],"efforts.":[249]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-23T07:36:19.812096","created_date":"2025-10-10T00:00:00"}
