{"id":"https://openalex.org/W2095175397","doi":"https://doi.org/10.1186/1471-2105-11-s10-o8","title":"Next generation genome annotation with mGene.ngs","display_name":"Next generation genome annotation with mGene.ngs","publication_year":2010,"publication_date":"2010-12-01","ids":{"openalex":"https://openalex.org/W2095175397","doi":"https://doi.org/10.1186/1471-2105-11-s10-o8","mag":"2095175397"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s10-o8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s10-o8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S10-O8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S10-O8","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5000441812","display_name":"Jonas Behr","orcid":"https://orcid.org/0000-0002-1288-1322"},"institutions":[{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Jonas Behr","raw_affiliation_strings":["Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090404774","display_name":"Regina Bohnert","orcid":null},"institutions":[{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Regina Bohnert","raw_affiliation_strings":["Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031822697","display_name":"Georg Zeller","orcid":"https://orcid.org/0000-0003-1429-7485"},"institutions":[{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]},{"id":"https://openalex.org/I4210112458","display_name":"Max Planck Institute for Developmental Biology","ror":"https://ror.org/022jc0g24","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112458"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Georg Zeller","raw_affiliation_strings":["Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","Max Planck Institute for Developmental Biology, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]},{"raw_affiliation_string":"Max Planck Institute for Developmental Biology, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210112458"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060937554","display_name":"Gabriele Schweikert","orcid":"https://orcid.org/0000-0002-7813-7918"},"institutions":[{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]},{"id":"https://openalex.org/I4210112925","display_name":"Max Planck Institute for Biological Cybernetics","ror":"https://ror.org/026nmvv73","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112925"]},{"id":"https://openalex.org/I4210112458","display_name":"Max Planck Institute for Developmental Biology","ror":"https://ror.org/022jc0g24","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210112458"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Gabriele Schweikert","raw_affiliation_strings":["Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","Max Planck Institute for Biological Cybernetics, T\u00fcbingen, Germany","Max Planck Institute for Developmental Biology, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]},{"raw_affiliation_string":"Max Planck Institute for Biological Cybernetics, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210112925"]},{"raw_affiliation_string":"Max Planck Institute for Developmental Biology, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210112458"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087006307","display_name":"Lisa Hartmann","orcid":"https://orcid.org/0000-0003-3494-2269"},"institutions":[{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Lisa Hartmann","raw_affiliation_strings":["Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035416263","display_name":"Gunnar R\u00e4tsch","orcid":"https://orcid.org/0000-0001-5486-8532"},"institutions":[{"id":"https://openalex.org/I4210147862","display_name":"Friedrich Miescher Laboratory","ror":"https://ror.org/04vh1tq58","country_code":"DE","type":"nonprofit","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210147862"]},{"id":"https://openalex.org/I149899117","display_name":"Max Planck Society","ror":"https://ror.org/01hhn8329","country_code":"DE","type":"funder","lineage":["https://openalex.org/I149899117"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Gunnar R\u00e4tsch","raw_affiliation_strings":["Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany"],"affiliations":[{"raw_affiliation_string":"Friedrich Miescher Laboratory of the Max Planck Society, T\u00fcbingen, Germany","institution_ids":["https://openalex.org/I4210147862","https://openalex.org/I149899117"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5000441812"],"corresponding_institution_ids":["https://openalex.org/I149899117","https://openalex.org/I4210147862"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.2711,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.59788524,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"11","issue":"S10","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6488077640533447},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5928418040275574},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.5812250971794128},{"id":"https://openalex.org/keywords/gene-prediction","display_name":"Gene prediction","score":0.5371281504631042},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.5208185911178589},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5126616358757019},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5098151564598083},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4978458881378174},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4852869212627411},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.46076372265815735},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.44972893595695496},{"id":"https://openalex.org/keywords/genome-project","display_name":"Genome project","score":0.4492723047733307},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4478946626186371},{"id":"https://openalex.org/keywords/complement","display_name":"Complement (music)","score":0.41618967056274414},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3497680425643921},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.20458576083183289},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.17737001180648804},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.08712244033813477}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6488077640533447},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5928418040275574},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.5812250971794128},{"id":"https://openalex.org/C105565629","wikidata":"https://www.wikidata.org/wiki/Q1248292","display_name":"Gene prediction","level":4,"score":0.5371281504631042},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.5208185911178589},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5126616358757019},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5098151564598083},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4978458881378174},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4852869212627411},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.46076372265815735},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.44972893595695496},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.4492723047733307},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4478946626186371},{"id":"https://openalex.org/C112313634","wikidata":"https://www.wikidata.org/wiki/Q7886648","display_name":"Complement (music)","level":5,"score":0.41618967056274414},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3497680425643921},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.20458576083183289},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17737001180648804},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.08712244033813477},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-11-s10-o8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s10-o8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S10-O8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.170.6945","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.170.6945","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.fml.tuebingen.mpg.de/raetsch/lectures/ISCB-talk-Jonas-Behr.pdf","raw_type":"text"},{"id":"pmh:oai:edoc.mpg.de:536294","is_oa":false,"landing_page_url":"http://edoc.mpg.de/536294","pdf_url":null,"source":{"id":"https://openalex.org/S4406922265","display_name":"Max Planck Institute for Plasma Physics","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Talk at Event"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s10-o8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s10-o8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S10-O8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2095175397.pdf","grobid_xml":"https://content.openalex.org/works/W2095175397.grobid-xml"},"referenced_works_count":4,"referenced_works":["https://openalex.org/W2104139298","https://openalex.org/W2129561668","https://openalex.org/W2130395351","https://openalex.org/W2141458291"],"related_works":["https://openalex.org/W2141847640","https://openalex.org/W2980998232","https://openalex.org/W4388524370","https://openalex.org/W2101269698","https://openalex.org/W2294108133","https://openalex.org/W2059565715","https://openalex.org/W2078942911","https://openalex.org/W4231584750","https://openalex.org/W2955310315","https://openalex.org/W2279845149"],"abstract_inverted_index":{"What":[0],"is":[1,14],"mGene.ngs":[2],"doing?":[3],"fml":[4],"\u25ee":[5,12],"Task:":[6],"Identification":[7],"of":[8],"protein":[9],"coding":[10],"genes":[11],"Why":[13],"this":[15],"Task":[16],"important:":[17]},"counts_by_year":[{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
