{"id":"https://openalex.org/W4243158672","doi":"https://doi.org/10.1186/1471-2105-11-s10-o7","title":"is-rSNP: a novel technique for in silico regulatory SNP detection","display_name":"is-rSNP: a novel technique for in silico regulatory SNP detection","publication_year":2010,"publication_date":"2010-12-01","ids":{"openalex":"https://openalex.org/W4243158672","doi":"https://doi.org/10.1186/1471-2105-11-s10-o7"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s10-o7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s10-o7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S10-O7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S10-O7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5048069780","display_name":"Geoff Macintyre","orcid":"https://orcid.org/0000-0003-3906-467X"},"institutions":[{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Geoff Macintyre","raw_affiliation_strings":["Department of Computer Science and Software Engineering, The University of Melbourne, Victoria, 3010, Australia","NICTA, Victoria Research Lab, The University of Melbourne, Victoria, 3010, Australia","NICTA, Victoria Research Lab, The University of Melbourne, Victoria, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Software Engineering, The University of Melbourne, Victoria, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"NICTA, Victoria Research Lab, The University of Melbourne, Victoria, 3010, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I71270174"]},{"raw_affiliation_string":"NICTA, Victoria Research Lab, The University of Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065024170","display_name":"James P. Bailey","orcid":"https://orcid.org/0000-0002-7207-512X"},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"James Bailey","raw_affiliation_strings":["Department of Computer Science and Software Engineering, The University of Melbourne, Victoria, 3010, Australia","NICTA, Victoria Research Lab, The University of Melbourne, Victoria, 3010, Australia","NICTA, Victoria Research Lab, The University of Melbourne, Victoria, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Software Engineering, The University of Melbourne, Victoria, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"NICTA, Victoria Research Lab, The University of Melbourne, Victoria, 3010, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I71270174"]},{"raw_affiliation_string":"NICTA, Victoria Research Lab, The University of Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112903849","display_name":"Izhak Haviv","orcid":null},"institutions":[{"id":"https://openalex.org/I2800555584","display_name":"Peter MacCallum Cancer Centre","ror":"https://ror.org/02a8bt934","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I2800555584"]},{"id":"https://openalex.org/I142471025","display_name":"Baker Heart and Diabetes Institute","ror":"https://ror.org/03rke0285","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I142471025"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Izhak Haviv","raw_affiliation_strings":["Bioinformatics and Systems Integration, The Blood and DNA Profiling Facility, Baker IDI heart and diabetes Institute, 75 Commercial Rd, Prahran, 3004, Victoria, Australia","Department of Biochemistry and Molecular Biology, The University of Melbourne, Victoria, 3010, Australia","Ian Potter Centre for Cancer Genomics and Predictive Medicine, Peter MacCallum Cancer Centre, East Melbourne, Victoria, Australia","Department of Biochemistry and Molecular Biology, The University of Melbourne, Victoria, Australia","Ian Potter Centre for Cancer Genomics and Predictive Medicine, Peter MacCallum Cancer Centre, East Melbourne, Australia","Bioinformatics and Systems Integration, The Blood and DNA Profiling Facility, Baker IDI heart and diabetes Institute, Victoria, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Systems Integration, The Blood and DNA Profiling Facility, Baker IDI heart and diabetes Institute, 75 Commercial Rd, Prahran, 3004, Victoria, Australia","institution_ids":["https://openalex.org/I142471025"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, The University of Melbourne, Victoria, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Ian Potter Centre for Cancer Genomics and Predictive Medicine, Peter MacCallum Cancer Centre, East Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I2800555584"]},{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, The University of Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Ian Potter Centre for Cancer Genomics and Predictive Medicine, Peter MacCallum Cancer Centre, East Melbourne, Australia","institution_ids":["https://openalex.org/I2800555584"]},{"raw_affiliation_string":"Bioinformatics and Systems Integration, The Blood and DNA Profiling Facility, Baker IDI heart and diabetes Institute, Victoria, Australia","institution_ids":["https://openalex.org/I142471025"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101601191","display_name":"Adam Kowalczyk","orcid":"https://orcid.org/0000-0001-9068-3383"},"institutions":[{"id":"https://openalex.org/I71270174","display_name":"Victoria University","ror":"https://ror.org/04j757h98","country_code":"AU","type":"education","lineage":["https://openalex.org/I71270174"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Adam Kowalczyk","raw_affiliation_strings":["NICTA, Victoria Research Lab, The University of Melbourne, Victoria, 3010, Australia","NICTA, Victoria Research Lab, The University of Melbourne, Victoria, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"NICTA, Victoria Research Lab, The University of Melbourne, Victoria, 3010, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I71270174"]},{"raw_affiliation_string":"NICTA, Victoria Research Lab, The University of Melbourne, Victoria, Australia","institution_ids":["https://openalex.org/I42894916","https://openalex.org/I165779595"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5048069780"],"corresponding_institution_ids":["https://openalex.org/I165779595","https://openalex.org/I42894916","https://openalex.org/I71270174"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.4083,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.64769392,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"11","issue":"S10","first_page":null,"last_page":null},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9970999956130981,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.8431034684181213},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6415550708770752},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6047349572181702},{"id":"https://openalex.org/keywords/snp","display_name":"SNP","score":0.5654791593551636},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4526132047176361},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35687512159347534},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3080918490886688},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.18156570196151733},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18035125732421875},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.10865145921707153},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.07616987824440002}],"concepts":[{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.8431034684181213},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6415550708770752},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6047349572181702},{"id":"https://openalex.org/C139275648","wikidata":"https://www.wikidata.org/wiki/Q17134011","display_name":"SNP","level":5,"score":0.5654791593551636},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4526132047176361},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35687512159347534},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3080918490886688},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.18156570196151733},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18035125732421875},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.10865145921707153},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.07616987824440002}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/1471-2105-11-s10-o7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s10-o7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S10-O7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.351.3351","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.351.3351","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/a6/44/Bioinformatics_2010_Sep_15_26(18)_i524-i530.tar.gz","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:9309ba28c65046e892cad0d23d2ce7eb","is_oa":true,"landing_page_url":"https://doaj.org/article/9309ba28c65046e892cad0d23d2ce7eb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss Suppl 10, p O7 (2010)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s10-o7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s10-o7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/1471-2105-11-S10-O7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4243158672.pdf","grobid_xml":"https://content.openalex.org/works/W4243158672.grobid-xml"},"referenced_works_count":1,"referenced_works":["https://openalex.org/W2131164829"],"related_works":["https://openalex.org/W2003194288","https://openalex.org/W2513589746","https://openalex.org/W2213189664","https://openalex.org/W2153919606","https://openalex.org/W2074002899","https://openalex.org/W2062254828","https://openalex.org/W4237480606","https://openalex.org/W2936968863","https://openalex.org/W1971792277","https://openalex.org/W4313128508"],"abstract_inverted_index":null,"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2014,"cited_by_count":6},{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
