{"id":"https://openalex.org/W2160045133","doi":"https://doi.org/10.1186/1471-2105-11-s1-s54","title":"Estimating true evolutionary distances under rearrangements, duplications, and losses","display_name":"Estimating true evolutionary distances under rearrangements, duplications, and losses","publication_year":2010,"publication_date":"2010-01-01","ids":{"openalex":"https://openalex.org/W2160045133","doi":"https://doi.org/10.1186/1471-2105-11-s1-s54","mag":"2160045133","pmid":"https://pubmed.ncbi.nlm.nih.gov/20122229"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-s1-s54","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s1-s54","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S54","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S54","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079714822","display_name":"Yu Lin","orcid":"https://orcid.org/0000-0001-6339-2644"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":true,"raw_author_name":"Yu Lin","raw_affiliation_strings":["Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015 Lausanne, Switzerland. yu.lin@epfl.ch","Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015 Lausanne, Switzerland. yu.lin@epfl.ch","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079452621","display_name":"Vaibhav Rajan","orcid":"https://orcid.org/0000-0002-6748-6864"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Vaibhav Rajan","raw_affiliation_strings":["Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014999428","display_name":"Krister M. Swenson","orcid":"https://orcid.org/0000-0001-8690-1261"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Krister M Swenson","raw_affiliation_strings":["Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059287546","display_name":"Bernard M. E. Moret","orcid":"https://orcid.org/0000-0003-1549-4544"},"institutions":[{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CH"],"is_corresponding":false,"raw_author_name":"Bernard ME Moret","raw_affiliation_strings":["Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland"],"affiliations":[{"raw_affiliation_string":"Laboratory for Computational Biology and Bioinformatics, Swiss Federal Institute of Technology (EPFL), EPFL-IIS-LCBB, INJ 230, Station 14, CH-1015, Lausanne, Switzerland","institution_ids":["https://openalex.org/I5124864"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5079714822"],"corresponding_institution_ids":["https://openalex.org/I5124864"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.2767,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.89132483,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"11","issue":"S1","first_page":"S54","last_page":"S54"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13664","display_name":"Genome Rearrangement Algorithms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9872000217437744,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.8367244005203247},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.621843695640564},{"id":"https://openalex.org/keywords/genome-evolution","display_name":"Genome evolution","score":0.5834337472915649},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5671293139457703},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.5621539354324341},{"id":"https://openalex.org/keywords/chromosomal-inversion","display_name":"Chromosomal inversion","score":0.5199614763259888},{"id":"https://openalex.org/keywords/robustness","display_name":"Robustness (evolution)","score":0.5156775712966919},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.49387580156326294},{"id":"https://openalex.org/keywords/comparative-genomics","display_name":"Comparative genomics","score":0.47524189949035645},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.44717949628829956},{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.44494912028312683},{"id":"https://openalex.org/keywords/gene-rearrangement","display_name":"Gene rearrangement","score":0.4374104142189026},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4166116714477539},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.37472814321517944},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3692333698272705},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.36008286476135254},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.307741641998291},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.14519760012626648}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.8367244005203247},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.621843695640564},{"id":"https://openalex.org/C174600577","wikidata":"https://www.wikidata.org/wiki/Q5533491","display_name":"Genome evolution","level":4,"score":0.5834337472915649},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5671293139457703},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.5621539354324341},{"id":"https://openalex.org/C165984737","wikidata":"https://www.wikidata.org/wiki/Q1070877","display_name":"Chromosomal inversion","level":5,"score":0.5199614763259888},{"id":"https://openalex.org/C63479239","wikidata":"https://www.wikidata.org/wiki/Q7353546","display_name":"Robustness (evolution)","level":3,"score":0.5156775712966919},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.49387580156326294},{"id":"https://openalex.org/C105176652","wikidata":"https://www.wikidata.org/wiki/Q1147112","display_name":"Comparative genomics","level":5,"score":0.47524189949035645},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.44717949628829956},{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.44494912028312683},{"id":"https://openalex.org/C2992511266","wikidata":"https://www.wikidata.org/wiki/Q1093098","display_name":"Gene rearrangement","level":3,"score":0.4374104142189026},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4166116714477539},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.37472814321517944},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3692333698272705},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.36008286476135254},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.307741641998291},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.14519760012626648},{"id":"https://openalex.org/C53226629","wikidata":"https://www.wikidata.org/wiki/Q189967","display_name":"Karyotype","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015321","descriptor_name":"Gene Rearrangement","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015321","descriptor_name":"Gene Rearrangement","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D015321","descriptor_name":"Gene Rearrangement","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-11-s1-s54","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s1-s54","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S54","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20122229","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20122229","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.154.1459","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.154.1459","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://lcbb.epfl.ch/~moret/rearr-dup-loss-dist-2010.pdf","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:8834c59a65de4918a145366e7c9fbfe1","is_oa":true,"landing_page_url":"https://doaj.org/article/8834c59a65de4918a145366e7c9fbfe1","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss Suppl 1, p S54 (2010)","raw_type":"article"},{"id":"pmh:oai:infoscience.epfl.ch:141903","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/141903","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3009527","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3009527","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-s1-s54","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-s1-s54","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-S1-S54","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2160045133.pdf","grobid_xml":"https://content.openalex.org/works/W2160045133.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W74509308","https://openalex.org/W156146614","https://openalex.org/W1491688952","https://openalex.org/W1530804984","https://openalex.org/W1547622250","https://openalex.org/W1555623370","https://openalex.org/W1585881831","https://openalex.org/W1973186137","https://openalex.org/W2026452889","https://openalex.org/W2082638565","https://openalex.org/W2131459995","https://openalex.org/W2149628296","https://openalex.org/W2153520172","https://openalex.org/W2163165362","https://openalex.org/W2176286246","https://openalex.org/W4213205621"],"related_works":["https://openalex.org/W1978285855","https://openalex.org/W2124140696","https://openalex.org/W2346036277","https://openalex.org/W2156424038","https://openalex.org/W2152876917","https://openalex.org/W2052367112","https://openalex.org/W2037617759","https://openalex.org/W1983624690","https://openalex.org/W2794530479","https://openalex.org/W2040332058"],"abstract_inverted_index":{"We":[0],"give":[1],"the":[2,23],"first":[3],"robust,":[4],"statistically":[5],"based,":[6],"estimate":[7],"of":[8,57],"genomic":[9,51],"pairwise":[10],"distances":[11,38],"based":[12],"on":[13],"rearrangements,":[14],"duplications":[15],"and":[16,28,32,65],"losses,":[17],"under":[18],"a":[19],"model":[20,56],"that":[21],"respects":[22],"structural":[24],"dichotomy":[25],"between":[26],"prokaryotic":[27],"eukaryotic":[29],"genomes.":[30],"Accurate":[31],"robust":[33],"estimates":[34],"in":[35,63],"true":[36],"evolutionary":[37],"should":[39],"translate":[40],"into":[41],"much":[42],"better":[43],"phylogenetic":[44],"reconstructions":[45],"as":[46,48],"well":[47],"more":[49],"accurate":[50],"alignments,":[52],"while":[53],"our":[54],"new":[55],"genome":[58],"rearrangements":[59],"provides":[60],"another":[61],"refinement":[62],"simplicity":[64],"verisimilitude.":[66]},"counts_by_year":[{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}