{"id":"https://openalex.org/W2156631105","doi":"https://doi.org/10.1186/1471-2105-11-94","title":"Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments","display_name":"Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments","publication_year":2010,"publication_date":"2010-02-18","ids":{"openalex":"https://openalex.org/W2156631105","doi":"https://doi.org/10.1186/1471-2105-11-94","mag":"2156631105","pmid":"https://pubmed.ncbi.nlm.nih.gov/20167110"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-94","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-94","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-94","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-94","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5027374062","display_name":"James Bullard","orcid":null},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"James H Bullard","raw_affiliation_strings":["Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA. bullard@berkeley.edu","Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA. bullard@berkeley.edu","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044209711","display_name":"Elizabeth Purdom","orcid":"https://orcid.org/0000-0001-9455-7990"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth Purdom","raw_affiliation_strings":["Department of Statistics, University of California, Berkeley, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, University of California, Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053857063","display_name":"Kasper D. Hansen","orcid":"https://orcid.org/0000-0003-0086-0687"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kasper D Hansen","raw_affiliation_strings":["Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5018207168","display_name":"Sandrine Dudoit","orcid":"https://orcid.org/0000-0002-6069-8629"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sandrine Dudoit","raw_affiliation_strings":["Department of Statistics, University of California, Berkeley, Berkeley, CA, USA","Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Statistics, University of California, Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Division of Biostatistics, University of California, Berkeley, Berkeley, CA, USA","institution_ids":["https://openalex.org/I95457486"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5027374062"],"corresponding_institution_ids":["https://openalex.org/I95457486"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":43.5089,"has_fulltext":true,"cited_by_count":1773,"citation_normalized_percentile":{"value":0.99926768,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"11","issue":"1","first_page":"94","last_page":"94"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/normalization","display_name":"Normalization (sociology)","score":0.8400391936302185},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5630187392234802},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5065082311630249},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5032803416252136},{"id":"https://openalex.org/keywords/statistical-inference","display_name":"Statistical inference","score":0.4841464161872864},{"id":"https://openalex.org/keywords/statistical-hypothesis-testing","display_name":"Statistical hypothesis testing","score":0.4605710804462433},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.43818455934524536},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4301508665084839},{"id":"https://openalex.org/keywords/database-normalization","display_name":"Database normalization","score":0.4290272891521454},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.4181554913520813},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4020472764968872},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.33590397238731384},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.3056495487689972},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.25203800201416016},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.19587332010269165},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.19321393966674805},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.18746018409729004},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.1679803729057312},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.15542066097259521},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12196257710456848}],"concepts":[{"id":"https://openalex.org/C136886441","wikidata":"https://www.wikidata.org/wiki/Q926129","display_name":"Normalization (sociology)","level":2,"score":0.8400391936302185},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5630187392234802},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5065082311630249},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5032803416252136},{"id":"https://openalex.org/C134261354","wikidata":"https://www.wikidata.org/wiki/Q938438","display_name":"Statistical inference","level":2,"score":0.4841464161872864},{"id":"https://openalex.org/C87007009","wikidata":"https://www.wikidata.org/wiki/Q210832","display_name":"Statistical hypothesis testing","level":2,"score":0.4605710804462433},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.43818455934524536},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4301508665084839},{"id":"https://openalex.org/C162984825","wikidata":"https://www.wikidata.org/wiki/Q339072","display_name":"Database normalization","level":3,"score":0.4290272891521454},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.4181554913520813},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4020472764968872},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.33590397238731384},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.3056495487689972},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.25203800201416016},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.19587332010269165},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.19321393966674805},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18746018409729004},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.1679803729057312},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.15542066097259521},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12196257710456848},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0},{"id":"https://openalex.org/C19165224","wikidata":"https://www.wikidata.org/wiki/Q23404","display_name":"Anthropology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/1471-2105-11-94","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-94","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-94","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20167110","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20167110","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:biostats.bepress.com:ucbbiostat-1250","is_oa":false,"landing_page_url":"https://biostats.bepress.com/ucbbiostat/paper247","pdf_url":null,"source":{"id":"https://openalex.org/S4377196124","display_name":"Collection of Biostatistics Research Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"U.C. Berkeley Division of Biostatistics Working Paper Series","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:53e9fa473dc049739070a5d77b4d9f5a","is_oa":true,"landing_page_url":"https://doaj.org/article/53e9fa473dc049739070a5d77b4d9f5a","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 94 (2010)","raw_type":"article"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt6dh685jm","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/6dh685jm","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, vol 11, iss 1","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2838869","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2838869","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:qt6dh685jm","is_oa":false,"landing_page_url":"http://www.escholarship.org/uc/item/6dh685jm","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bullard, James H; Purdom, Elizabeth; Hansen, Kasper D; &amp; Dudoit, Sandrine. (2010). Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments. BMC Bioinformatics, 11(1), 94. doi: 10.1186/1471-2105-11-94. UC Berkeley: UC Berkeley Library. Retrieved from: http://www.escholarship.org/uc/item/6dh685jm","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-94","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-94","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-94","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.4699999988079071,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G6894402473","display_name":null,"funder_award_id":"Fellowship","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2156631105.pdf","grobid_xml":"https://content.openalex.org/works/W2156631105.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1528905581","https://openalex.org/W1984708728","https://openalex.org/W2010637767","https://openalex.org/W2011071927","https://openalex.org/W2012016911","https://openalex.org/W2022617545","https://openalex.org/W2081098333","https://openalex.org/W2090144921","https://openalex.org/W2091975751","https://openalex.org/W2114504176","https://openalex.org/W2116166762","https://openalex.org/W2119923823","https://openalex.org/W2121016876","https://openalex.org/W2121211805","https://openalex.org/W2124985265","https://openalex.org/W2131088968","https://openalex.org/W2133203904","https://openalex.org/W2136746865","https://openalex.org/W2145416275","https://openalex.org/W2154431984","https://openalex.org/W2155804510","https://openalex.org/W2170989872","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W4226211120","https://openalex.org/W2461683294","https://openalex.org/W1987205174","https://openalex.org/W4321447026","https://openalex.org/W2380849986","https://openalex.org/W2498363374","https://openalex.org/W2504417049","https://openalex.org/W4247364450","https://openalex.org/W1993033667","https://openalex.org/W2909683728"],"abstract_inverted_index":{"Our":[0],"results":[1],"have":[2],"significant":[3],"practical":[4],"and":[5,11,26,57],"methodological":[6],"implications":[7],"for":[8,24,31,49,60],"the":[9,18,34,40,47,53],"design":[10],"analysis":[12],"of":[13,20,33,42,55],"mRNA-Seq":[14],"experiments.":[15],"They":[16,44],"highlight":[17],"importance":[19],"appropriate":[21],"statistical":[22,56],"methods":[23,59],"normalization":[25],"DE":[27],"inference,":[28],"to":[29],"account":[30],"features":[32],"sequencing":[35],"platform":[36],"that":[37],"could":[38],"impact":[39],"accuracy":[41],"results.":[43],"also":[45],"reveal":[46],"need":[48],"further":[50],"research":[51],"in":[52],"development":[54],"computational":[58],"mRNA-Seq.":[61]},"counts_by_year":[{"year":2026,"cited_by_count":12},{"year":2025,"cited_by_count":55},{"year":2024,"cited_by_count":82},{"year":2023,"cited_by_count":77},{"year":2022,"cited_by_count":106},{"year":2021,"cited_by_count":136},{"year":2020,"cited_by_count":145},{"year":2019,"cited_by_count":137},{"year":2018,"cited_by_count":128},{"year":2017,"cited_by_count":143},{"year":2016,"cited_by_count":126},{"year":2015,"cited_by_count":132},{"year":2014,"cited_by_count":172},{"year":2013,"cited_by_count":129},{"year":2012,"cited_by_count":97}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
