{"id":"https://openalex.org/W2111776022","doi":"https://doi.org/10.1186/1471-2105-11-70","title":"LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships","display_name":"LAITOR - Literature Assistant for Identification of Terms co-Occurrences and Relationships","publication_year":2010,"publication_date":"2010-02-01","ids":{"openalex":"https://openalex.org/W2111776022","doi":"https://doi.org/10.1186/1471-2105-11-70","mag":"2111776022","pmid":"https://pubmed.ncbi.nlm.nih.gov/20122157"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-70","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-70","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-70","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-70","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5063632942","display_name":"Adriano Barbosa-Silva","orcid":"https://orcid.org/0000-0002-5260-2607"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]},{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I205582932","display_name":"Max Delbr\u00fcck Center","ror":"https://ror.org/04p5ggc03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I205582932"]}],"countries":["BR","DE","GB"],"is_corresponding":true,"raw_author_name":"Adriano Barbosa-Silva","raw_affiliation_strings":["Max-Delbr\u00fcck Center for Molecular Medicine, Berlin, Germany","Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, Berlin, Germany","Laborat\u00f3rio de Biodados, Dpto. de Bioqu\u00edmica e Imunologia, ICB - UFMG. 31270-901, Belo Horizonte - MG, Brazil","European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Max-Delbr\u00fcck Center for Molecular Medicine, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]},{"raw_affiliation_string":"Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]},{"raw_affiliation_string":"Laborat\u00f3rio de Biodados, Dpto. de Bioqu\u00edmica e Imunologia, ICB - UFMG. 31270-901, Belo Horizonte - MG, Brazil","institution_ids":["https://openalex.org/I110200422"]},{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039053742","display_name":"Theodoros Soldatos","orcid":"https://orcid.org/0000-0001-6051-6605"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210130655","display_name":"BioSystem (Germany)","ror":"https://ror.org/03ve6sf73","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210130655"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Theodoros G Soldatos","raw_affiliation_strings":["European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, 69117, Heidelberg, Germany","LIFE Biosystems GmbH. Poststrasse 34, D-69115, Heidelberg, Germany","European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, 69117, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"LIFE Biosystems GmbH. Poststrasse 34, D-69115, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210130655"]},{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051332750","display_name":"Ivan L. F. Magalh\u00e3es","orcid":"https://orcid.org/0000-0003-3728-3270"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"Ivan LF Magalh\u00e3es","raw_affiliation_strings":["Laborat\u00f3rio de Biodados, Dpto. de Bioqu\u00edmica e Imunologia, ICB - UFMG. 31270-901, Belo Horizonte - MG, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Biodados, Dpto. de Bioqu\u00edmica e Imunologia, ICB - UFMG. 31270-901, Belo Horizonte - MG, Brazil","institution_ids":["https://openalex.org/I110200422"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088991393","display_name":"Georgios A. Pavlopoulos","orcid":"https://orcid.org/0000-0002-4577-8276"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Georgios A Pavlopoulos","raw_affiliation_strings":["European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, 69117, Heidelberg, Germany","European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, 69117, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055724941","display_name":"Jean\u2212Fred Fontaine","orcid":"https://orcid.org/0000-0002-1101-4091"},"institutions":[{"id":"https://openalex.org/I205582932","display_name":"Max Delbr\u00fcck Center","ror":"https://ror.org/04p5ggc03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I205582932"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Jean-Fred Fontaine","raw_affiliation_strings":["Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, D-13125, Berlin, Germany","Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, D-13125, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]},{"raw_affiliation_string":"Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010178662","display_name":"Miguel A. Andrade\u2010Navarro","orcid":"https://orcid.org/0000-0001-6650-1711"},"institutions":[{"id":"https://openalex.org/I205582932","display_name":"Max Delbr\u00fcck Center","ror":"https://ror.org/04p5ggc03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I205582932"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Miguel A Andrade-Navarro","raw_affiliation_strings":["Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, D-13125, Berlin, Germany","Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, D-13125, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]},{"raw_affiliation_string":"Computational Biology and Data Mining Group, Max-Delbr\u00fcck Center for Molecular Medicine. Robert-R\u00f6ssle-Strasse. 10, Berlin, Germany","institution_ids":["https://openalex.org/I205582932"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I1303153112","display_name":"European Bioinformatics Institute","ror":"https://ror.org/02catss52","country_code":"GB","type":"facility","lineage":["https://openalex.org/I1303153112","https://openalex.org/I4210138560"]},{"id":"https://openalex.org/I4210153543","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/050589e39","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560","https://openalex.org/I4210153543"]}],"countries":["DE","GB"],"is_corresponding":false,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, 69117, Heidelberg, Germany","European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, 69117, Heidelberg, Germany","institution_ids":["https://openalex.org/I4210153543"]},{"raw_affiliation_string":"European Molecular Biology Laboratory, EMBL-Heidelberg, Meyerhofstrasse 1, Heidelberg, Germany","institution_ids":["https://openalex.org/I1303153112"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5059977137","display_name":"Jos\u00e9 Miguel Ortega","orcid":"https://orcid.org/0000-0003-1132-1910"},"institutions":[{"id":"https://openalex.org/I110200422","display_name":"Universidade Federal de Minas Gerais","ror":"https://ror.org/0176yjw32","country_code":"BR","type":"education","lineage":["https://openalex.org/I110200422"]}],"countries":["BR"],"is_corresponding":false,"raw_author_name":"J Miguel Ortega","raw_affiliation_strings":["Laborat\u00f3rio de Biodados, Dpto. de Bioqu\u00edmica e Imunologia, ICB - UFMG. 31270-901, Belo Horizonte - MG, Brazil"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laborat\u00f3rio de Biodados, Dpto. de Bioqu\u00edmica e Imunologia, ICB - UFMG. 31270-901, Belo Horizonte - MG, Brazil","institution_ids":["https://openalex.org/I110200422"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5063632942"],"corresponding_institution_ids":["https://openalex.org/I110200422","https://openalex.org/I1303153112","https://openalex.org/I205582932"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.6333,"has_fulltext":true,"cited_by_count":31,"citation_normalized_percentile":{"value":0.83066742,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"70","last_page":"70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9896000027656555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.004699999932199717,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13083","display_name":"Advanced Text Analysis Techniques","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6653553247451782},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6647530794143677},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6324716806411743},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6195807456970215},{"id":"https://openalex.org/keywords/scientific-literature","display_name":"Scientific literature","score":0.5575592517852783},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5327845811843872},{"id":"https://openalex.org/keywords/field","display_name":"Field (mathematics)","score":0.5260196328163147},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4939423203468323},{"id":"https://openalex.org/keywords/recall","display_name":"Recall","score":0.4819076359272003},{"id":"https://openalex.org/keywords/precision-and-recall","display_name":"Precision and recall","score":0.4582509398460388},{"id":"https://openalex.org/keywords/test","display_name":"Test (biology)","score":0.44309723377227783},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3532606363296509},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1790059208869934},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.14310604333877563},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12299835681915283},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0756949782371521}],"concepts":[{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6653553247451782},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6647530794143677},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6324716806411743},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6195807456970215},{"id":"https://openalex.org/C2781083858","wikidata":"https://www.wikidata.org/wiki/Q17327049","display_name":"Scientific literature","level":2,"score":0.5575592517852783},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5327845811843872},{"id":"https://openalex.org/C9652623","wikidata":"https://www.wikidata.org/wiki/Q190109","display_name":"Field (mathematics)","level":2,"score":0.5260196328163147},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4939423203468323},{"id":"https://openalex.org/C100660578","wikidata":"https://www.wikidata.org/wiki/Q18733","display_name":"Recall","level":2,"score":0.4819076359272003},{"id":"https://openalex.org/C81669768","wikidata":"https://www.wikidata.org/wiki/Q2359161","display_name":"Precision and recall","level":2,"score":0.4582509398460388},{"id":"https://openalex.org/C2777267654","wikidata":"https://www.wikidata.org/wiki/Q3519023","display_name":"Test (biology)","level":2,"score":0.44309723377227783},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3532606363296509},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1790059208869934},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.14310604333877563},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12299835681915283},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0756949782371521},{"id":"https://openalex.org/C180747234","wikidata":"https://www.wikidata.org/wiki/Q23373","display_name":"Cognitive psychology","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C202444582","wikidata":"https://www.wikidata.org/wiki/Q837863","display_name":"Pure mathematics","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016239","descriptor_name":"MEDLINE","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/1471-2105-11-70","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-70","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-70","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20122157","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20122157","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:edoc.mdc-berlin.de:10730","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":{"id":"https://openalex.org/S4306400224","display_name":"MDC Repository (Max-Delbrueck-Center for Molecular Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:doaj.org/article:9d040331e8b24e278ee5ac3868cb8489","is_oa":false,"landing_page_url":"https://doaj.org/article/9d040331e8b24e278ee5ac3868cb8489","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 70 (2010)","raw_type":"article"},{"id":"pmh:oai:orbilu.uni.lu:10993/17061","is_oa":true,"landing_page_url":"https://orbilu.uni.lu/handle/10993/17061","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 11, 70. England (2010).","raw_type":null},{"id":"pmh:oai:orbilu.uni.lu:10993/17516","is_oa":true,"landing_page_url":"http://orbilu.uni.lu/handle/10993/17061","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 11, 70. England (2010).","raw_type":"info:eu-repo/semantics/other"},{"id":"pmh:oai:pubmedcentral.nih.gov:3098111","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3098111","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-70","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-70","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-70","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.4099999964237213,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321091","display_name":"Coordena\u00e7\u00e3o de Aperfei\u00e7oamento de Pessoal de N\u00edvel Superior","ror":"https://ror.org/00x0ma614"},{"id":"https://openalex.org/F4320321114","display_name":"Bundesministerium f\u00fcr Bildung und Forschung","ror":"https://ror.org/04pz7b180"},{"id":"https://openalex.org/F4320322025","display_name":"Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico","ror":"https://ror.org/03swz6y49"},{"id":"https://openalex.org/F4320322980","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de Minas Gerais","ror":"https://ror.org/00nc55f03"},{"id":"https://openalex.org/F4320323809","display_name":"Minist\u00e9rio da Educa\u00e7\u00e3o","ror":"https://ror.org/04d0xx942"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2111776022.pdf","grobid_xml":"https://content.openalex.org/works/W2111776022.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1524893958","https://openalex.org/W1547083634","https://openalex.org/W1567787856","https://openalex.org/W1605762876","https://openalex.org/W1969828950","https://openalex.org/W1971471239","https://openalex.org/W1979913878","https://openalex.org/W1990928629","https://openalex.org/W1996002274","https://openalex.org/W2003430388","https://openalex.org/W2011726136","https://openalex.org/W2031599462","https://openalex.org/W2040223842","https://openalex.org/W2042004694","https://openalex.org/W2051199719","https://openalex.org/W2064030835","https://openalex.org/W2069488475","https://openalex.org/W2088944985","https://openalex.org/W2099794271","https://openalex.org/W2100399875","https://openalex.org/W2103397879","https://openalex.org/W2103897355","https://openalex.org/W2111627817","https://openalex.org/W2112441656","https://openalex.org/W2113613985","https://openalex.org/W2117234604","https://openalex.org/W2120736575","https://openalex.org/W2122763686","https://openalex.org/W2124617249","https://openalex.org/W2135688535","https://openalex.org/W2145126338","https://openalex.org/W2148395543","https://openalex.org/W2152698860","https://openalex.org/W2156930958","https://openalex.org/W2159482845","https://openalex.org/W2160317546","https://openalex.org/W2169115409","https://openalex.org/W2169974160","https://openalex.org/W2416696155"],"related_works":["https://openalex.org/W4330338194","https://openalex.org/W2118758177","https://openalex.org/W2153520307","https://openalex.org/W2151459719","https://openalex.org/W623261610","https://openalex.org/W2036523811","https://openalex.org/W4232264032","https://openalex.org/W2358294942","https://openalex.org/W4367460280","https://openalex.org/W4328049145"],"abstract_inverted_index":{"BACKGROUND:":[0],"Biological":[1],"knowledge":[2],"is":[3],"represented":[4],"in":[5,16,52,97,121,153,182,186],"scientific":[6,188],"literature":[7,46],"that":[8,32,87],"often":[9,25],"describes":[10],"the":[11,41,44,56,104,107,142,147,161,168],"function":[12],"of":[13,18,30,35,43,58,64,82,90,106,133,138,144,149,156,170],"genes/proteins":[14],"(bioentities)":[15],"terms":[17,96,109],"their":[19],"interactions":[20,120],"(biointeractions).":[21],"Such":[22],"bioentities":[23,65,172],"are":[24,33],"related":[26],"to":[27,66,146,160],"biological":[28,95,174],"concepts":[29,175],"interest":[31],"specific":[34],"a":[36,48,62,67,73,122,131,136,154],"determined":[37],"research":[38],"field.":[39],"Therefore,":[40],"study":[42],"current":[45],"about":[47],"selected":[49],"topic":[50],"deposited":[51],"public":[53],"databases,":[54],"facilitates":[55],"generation":[57],"novel":[59],"hypotheses":[60,185],"associating":[61],"set":[63],"common":[68],"context.":[69],"RESULTS:":[70],"We":[71,140],"created":[72],"text":[74],"mining":[75,165],"system":[76,115],"(LAITOR:":[77],"Literature":[78],"Assistant":[79],"for":[80,103],"Identification":[81],"Terms":[83],"co-Occurrences":[84],"and":[85,93,135,173],"Relationships)":[86],"analyses":[88],"co-occurrences":[89],"bioentities,":[91],"biointeractions,":[92],"other":[94],"MEDLINE":[98],"abstracts.":[99,113],"The":[100,114],"method":[101],"accounts":[102],"position":[105],"co-occurring":[108],"within":[110],"sentences":[111],"or":[112],"detected":[116],"abstracts":[117,158],"mentioning":[118],"protein-protein":[119],"standard":[123],"test":[124,128],"(BioCreative":[125],"II":[126],"IAS":[127],"data)":[129],"with":[130,176],"precision":[132],"0.82-0.89":[134],"recall":[137],"0.48-0.70.":[139],"illustrate":[141],"application":[143],"LAITOR":[145],"detection":[148],"plant":[150],"response":[151],"genes":[152],"dataset":[155],"1000":[157],"relevant":[159],"topic.":[162],"CONCLUSIONS:":[163],"Text":[164],"tools":[166],"combining":[167],"extraction":[169],"interacting":[171],"network":[177],"displays":[178],"can":[179],"be":[180],"helpful":[181],"developing":[183],"reasonable":[184],"different":[187],"backgrounds.":[189]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":10},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2016-06-24T00:00:00"}
