{"id":"https://openalex.org/W2161291513","doi":"https://doi.org/10.1186/1471-2105-11-608","title":"MBAT: A scalable informatics system for unifying digital atlasing workflows","display_name":"MBAT: A scalable informatics system for unifying digital atlasing workflows","publication_year":2010,"publication_date":"2010-12-01","ids":{"openalex":"https://openalex.org/W2161291513","doi":"https://doi.org/10.1186/1471-2105-11-608","mag":"2161291513","pmid":"https://pubmed.ncbi.nlm.nih.gov/21176225"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-608","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-608","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-608","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-608","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081728471","display_name":"Daren Lee","orcid":"https://orcid.org/0000-0001-5960-0690"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]},{"id":"https://openalex.org/I4210143253","display_name":"Cognitive Neuroimaging Lab","ror":"https://ror.org/056wdpc91","country_code":"FR","type":"facility","lineage":["https://openalex.org/I154526488","https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I4210113668","https://openalex.org/I4210143253"]}],"countries":["FR","US"],"is_corresponding":true,"raw_author_name":"Daren Lee","raw_affiliation_strings":["UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA USA","UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA USA","institution_ids":["https://openalex.org/I4210143253"]},{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074987111","display_name":"Seth Ruffins","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Seth Ruffins","raw_affiliation_strings":["UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067564733","display_name":"Queenie Ng","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Queenie Ng","raw_affiliation_strings":["UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015418629","display_name":"Nikhil Sane","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nikhil Sane","raw_affiliation_strings":["UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Steve Anderson","orcid":null},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steve Anderson","raw_affiliation_strings":["UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014949118","display_name":"Arthur W. Toga","orcid":"https://orcid.org/0000-0001-7902-3755"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Arthur Toga","raw_affiliation_strings":["UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UCLA Laboratory of NeuroImaging, David Geffin School of Medicine, Los Angeles, CA, USA","institution_ids":["https://openalex.org/I161318765"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5081728471"],"corresponding_institution_ids":["https://openalex.org/I161318765","https://openalex.org/I4210143253"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.1509,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.85045761,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"11","issue":"1","first_page":"608","last_page":"608"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6523000001907349,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.6523000001907349,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.16339999437332153,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.039000000804662704,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8292301893234253},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.7720696926116943},{"id":"https://openalex.org/keywords/workspace","display_name":"Workspace","score":0.6305422782897949},{"id":"https://openalex.org/keywords/plug-in","display_name":"Plug-in","score":0.5216593742370605},{"id":"https://openalex.org/keywords/disparate-system","display_name":"Disparate system","score":0.5086649060249329},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.5074304938316345},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.5022382736206055},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.49793553352355957},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3283769190311432},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.2544136047363281},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.14019373059272766}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8292301893234253},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.7720696926116943},{"id":"https://openalex.org/C58581272","wikidata":"https://www.wikidata.org/wiki/Q12741163","display_name":"Workspace","level":3,"score":0.6305422782897949},{"id":"https://openalex.org/C4924752","wikidata":"https://www.wikidata.org/wiki/Q184148","display_name":"Plug-in","level":2,"score":0.5216593742370605},{"id":"https://openalex.org/C19443361","wikidata":"https://www.wikidata.org/wiki/Q5282533","display_name":"Disparate system","level":2,"score":0.5086649060249329},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.5074304938316345},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.5022382736206055},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.49793553352355957},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3283769190311432},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.2544136047363281},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.14019373059272766},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C90509273","wikidata":"https://www.wikidata.org/wiki/Q11012","display_name":"Robot","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-11-608","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-608","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-608","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21176225","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21176225","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:55de750f532940c6b70d128256199631","is_oa":true,"landing_page_url":"https://doaj.org/article/55de750f532940c6b70d128256199631","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 608 (2010)","raw_type":"article"},{"id":"pmh:oai:escholarship.org/ark:/13030/qt4v28n7vz","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/4v28n7vz","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, vol 11, iss 1","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3023809","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3023809","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:qt4v28n7vz","is_oa":false,"landing_page_url":"http://www.escholarship.org/uc/item/4v28n7vz","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Lee, Daren; Ruffins, Seth; Ng, Queenie; Sane, Nikhil; Anderson, Steve; &amp; Toga, Arthur. (2010). MBAT: A scalable informatics system for unifying digital atlasing workflows. BMC Bioinformatics, 11(1), 608. doi: http://dx.doi.org/10.1186/1471-2105-11-608. Retrieved from: http://www.escholarship.org/uc/item/4v28n7vz","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-608","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-608","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-608","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5199999809265137,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309398","display_name":"California Institute of Technology","ror":"https://ror.org/05dxps055"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2161291513.pdf","grobid_xml":"https://content.openalex.org/works/W2161291513.grobid-xml"},"referenced_works_count":27,"referenced_works":["https://openalex.org/W612038441","https://openalex.org/W1582171200","https://openalex.org/W1828735316","https://openalex.org/W1884695109","https://openalex.org/W1990005524","https://openalex.org/W1990740222","https://openalex.org/W2008430350","https://openalex.org/W2013171582","https://openalex.org/W2026527241","https://openalex.org/W2029380217","https://openalex.org/W2037582484","https://openalex.org/W2075654334","https://openalex.org/W2084772990","https://openalex.org/W2094008335","https://openalex.org/W2102099319","https://openalex.org/W2113142309","https://openalex.org/W2115070053","https://openalex.org/W2123491442","https://openalex.org/W2138825607","https://openalex.org/W2188300213","https://openalex.org/W2264378898","https://openalex.org/W2294349043","https://openalex.org/W2904473752","https://openalex.org/W4206812712","https://openalex.org/W4242366482","https://openalex.org/W6600680088","https://openalex.org/W6605158005"],"related_works":["https://openalex.org/W1593688782","https://openalex.org/W123858428","https://openalex.org/W2540114004","https://openalex.org/W4294624527","https://openalex.org/W2113336906","https://openalex.org/W2184157017","https://openalex.org/W2098305631","https://openalex.org/W3123856223","https://openalex.org/W2306673451","https://openalex.org/W4287367162"],"abstract_inverted_index":{"BACKGROUND:":[0],"Digital":[1],"atlases":[2,275],"provide":[3,131],"a":[4,44,76,102,132,143,170,260,269],"common":[5,171],"semantic":[6,281],"and":[7,18,27,35,39,56,65,78,88,109,124,134,148,173,194,237,241,273],"spatial":[8,279],"coordinate":[9],"system":[10],"that":[11,107,211],"can":[12],"be":[13],"leveraged":[14],"to":[15,33,59,81,85,130,141,146,178,192,252,292,297],"compare,":[16],"contrast,":[17],"correlate":[19],"data":[20,31,42,47,67,150,153,157,165,184,257],"from":[21,151,166],"disparate":[22,256],"sources.":[23,68],"As":[24],"the":[25,51,83,90,111,122,128,139,159,179,183,199,277],"quality":[26],"amount":[28],"of":[29,127,182,198,206,239,245],"biological":[30,274],"continues":[32],"advance":[34],"grow,":[36],"searching,":[37],"referencing,":[38],"comparing":[40],"this":[41],"with":[43],"researcher's":[45],"own":[46],"is":[48,54],"essential.":[49],"However,":[50],"integration":[52],"process":[53],"cumbersome":[55],"time-consuming":[57],"due":[58],"misaligned":[60],"data,":[61,272],"implicitly":[62],"defined":[63],"associations,":[64],"incompatible":[66],"This":[69],"work":[70],"addressing":[71],"these":[72],"challenges":[73],"by":[74,258],"providing":[75,259],"unified":[77,261],"adaptable":[79],"environment":[80,262],"accelerate":[82],"workflow":[84],"gather,":[86],"align,":[87],"analyze":[89],"data.":[91,247],"RESULTS:":[92],"The":[93,187],"MouseBIRN":[94],"Atlasing":[95],"Toolkit":[96],"(MBAT)":[97],"project":[98,129],"was":[99,119],"developed":[100,210],"as":[101,214,216,230],"cross-platform,":[103],"free":[104],"open-source":[105],"application":[106],"unifies":[108],"accelerates":[110],"digital":[112],"atlas":[113],"workflow.":[114],"A":[115,203],"tiered,":[116],"plug-in":[117,287],"architecture":[118],"designed":[120],"for":[121,263],"neuroinformatics":[123],"genomics":[125],"goals":[126],"modular":[133],"extensible":[135,285],"design.":[136],"MBAT":[137,249,289],"provides":[138],"ability":[140],"use":[142],"single":[144],"query":[145],"search":[147],"retrieve":[149],"multiple":[152,167,232],"sources,":[154],"align":[155],"image":[156,271],"using":[158],"user's":[160,270],"preferred":[161],"registration":[162],"method,":[163],"composite":[164],"sources":[168],"in":[169],"space,":[172],"link":[174],"relevant":[175],"informatics":[176],"information":[177],"current":[180],"view":[181],"or":[185,280],"atlas.":[186],"workspaces":[188],"leverage":[189],"tool":[190,207],"plug-ins":[191,208],"extend":[193],"allow":[195],"future":[196],"extensions":[197],"basic":[200],"workspace":[201],"functionality.":[202],"wide":[204],"variety":[205],"were":[209,226],"integrate":[212],"pre-existing":[213],"well":[215],"newly":[217],"created":[218],"technology":[219],"into":[220,276],"each":[221],"workspace.":[222],"Novel":[223],"atlasing":[224],"features":[225],"also":[227],"developed,":[228],"such":[229],"supporting":[231],"label":[233],"sets,":[234],"dynamic":[235],"selection":[236],"grouping":[238],"labels,":[240],"synchronized,":[242],"context-driven":[243],"display":[244],"ontological":[246],"CONCLUSIONS:":[248],"empowers":[250],"researchers":[251,291],"discover":[253],"correlations":[254],"among":[255],"bringing":[264],"together":[265],"distributed":[266],"reference":[267],"resources,":[268],"same":[278],"context.":[282],"Through":[283],"its":[284],"tiered":[286],"architecture,":[288],"allows":[290],"customize":[293],"all":[294],"platform":[295],"components":[296],"quickly":[298],"achieve":[299],"personalized":[300],"workflows.":[301]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
