{"id":"https://openalex.org/W2072349313","doi":"https://doi.org/10.1186/1471-2105-11-564","title":"Empirical bayes analysis of sequencing-based transcriptional profiling without replicates","display_name":"Empirical bayes analysis of sequencing-based transcriptional profiling without replicates","publication_year":2010,"publication_date":"2010-11-16","ids":{"openalex":"https://openalex.org/W2072349313","doi":"https://doi.org/10.1186/1471-2105-11-564","mag":"2072349313","pmid":"https://pubmed.ncbi.nlm.nih.gov/21080965"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-564","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-564","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-564","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-564","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101770186","display_name":"Zhijin Wu","orcid":"https://orcid.org/0000-0002-9596-9134"},"institutions":[{"id":"https://openalex.org/I27804330","display_name":"Brown University","ror":"https://ror.org/05gq02987","country_code":"US","type":"education","lineage":["https://openalex.org/I27804330"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Zhijin Wu","raw_affiliation_strings":["Center for Statistical Sciences and Department of Community Health, Box G-121S-7, Brown University, Providence RI 02912, USA. zwu@stat.brown.edu","Center for Statistical Sciences and Department of Community Health, Brown University, Providence, USA"],"affiliations":[{"raw_affiliation_string":"Center for Statistical Sciences and Department of Community Health, Box G-121S-7, Brown University, Providence RI 02912, USA. zwu@stat.brown.edu","institution_ids":["https://openalex.org/I27804330"]},{"raw_affiliation_string":"Center for Statistical Sciences and Department of Community Health, Brown University, Providence, USA","institution_ids":["https://openalex.org/I27804330"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063671936","display_name":"Bethany D. Jenkins","orcid":"https://orcid.org/0000-0003-2319-3098"},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]},{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bethany D Jenkins","raw_affiliation_strings":["Department of Cell and Molecular Biology, The University of Rhode Island, 120 Flagg Road, Kingston, RI, 02881, USA","The Graduate School of Oceanography, University of Rhode Island, South Ferry Road, Narragansett, RI, 02882, USA","The Graduate School of Oceanography, University of Rhode Island, Narragansett, USA"],"affiliations":[{"raw_affiliation_string":"Department of Cell and Molecular Biology, The University of Rhode Island, 120 Flagg Road, Kingston, RI, 02881, USA","institution_ids":["https://openalex.org/I17626003"]},{"raw_affiliation_string":"The Graduate School of Oceanography, University of Rhode Island, South Ferry Road, Narragansett, RI, 02882, USA","institution_ids":["https://openalex.org/I121847817","https://openalex.org/I17626003"]},{"raw_affiliation_string":"The Graduate School of Oceanography, University of Rhode Island, Narragansett, USA","institution_ids":["https://openalex.org/I121847817","https://openalex.org/I17626003"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073623148","display_name":"Tatiana A. Rynearson","orcid":"https://orcid.org/0000-0003-2951-0066"},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]},{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tatiana A Rynearson","raw_affiliation_strings":["The Graduate School of Oceanography, University of Rhode Island, South Ferry Road, Narragansett, RI, 02882, USA","The Graduate School of Oceanography, University of Rhode Island, Narragansett, USA"],"affiliations":[{"raw_affiliation_string":"The Graduate School of Oceanography, University of Rhode Island, South Ferry Road, Narragansett, RI, 02882, USA","institution_ids":["https://openalex.org/I121847817","https://openalex.org/I17626003"]},{"raw_affiliation_string":"The Graduate School of Oceanography, University of Rhode Island, Narragansett, USA","institution_ids":["https://openalex.org/I121847817","https://openalex.org/I17626003"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065948966","display_name":"Sonya T. Dyhrman","orcid":"https://orcid.org/0000-0003-2901-699X"},"institutions":[{"id":"https://openalex.org/I66958751","display_name":"Woods Hole Oceanographic Institution","ror":"https://ror.org/03zbnzt98","country_code":"US","type":"funder","lineage":["https://openalex.org/I66958751"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sonya T Dyhrman","raw_affiliation_strings":["Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, 02543, USA","Biology Dept., Woods Hole Oceanographic Institution, Woods Hole, USA"],"affiliations":[{"raw_affiliation_string":"Biology Department, Woods Hole Oceanographic Institution, Woods Hole, MA, 02543, USA","institution_ids":["https://openalex.org/I66958751"]},{"raw_affiliation_string":"Biology Dept., Woods Hole Oceanographic Institution, Woods Hole, USA","institution_ids":["https://openalex.org/I66958751"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045508458","display_name":"Mak A. Saito","orcid":"https://orcid.org/0000-0001-6040-9295"},"institutions":[{"id":"https://openalex.org/I66958751","display_name":"Woods Hole Oceanographic Institution","ror":"https://ror.org/03zbnzt98","country_code":"US","type":"funder","lineage":["https://openalex.org/I66958751"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mak A Saito","raw_affiliation_strings":["Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, 360 Woods Hole Rd, Woods Hole, MA, 02543, USA","Marine Chemistry & Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, USA"],"affiliations":[{"raw_affiliation_string":"Marine Chemistry and Geochemistry Department, Woods Hole Oceanographic Institution, 360 Woods Hole Rd, Woods Hole, MA, 02543, USA","institution_ids":["https://openalex.org/I66958751"]},{"raw_affiliation_string":"Marine Chemistry & Geochemistry Department, Woods Hole Oceanographic Institution, Woods Hole, USA","institution_ids":["https://openalex.org/I66958751"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063007326","display_name":"Melissa L. Mercier","orcid":null},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]},{"id":"https://openalex.org/I121847817","display_name":"The Graduate Center, CUNY","ror":"https://ror.org/00awd9g61","country_code":"US","type":"education","lineage":["https://openalex.org/I121847817"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melissa Mercier","raw_affiliation_strings":["The Graduate School of Oceanography, University of Rhode Island, South Ferry Road, Narragansett, RI, 02882, USA","The Graduate School of Oceanography, University of Rhode Island, Narragansett, USA"],"affiliations":[{"raw_affiliation_string":"The Graduate School of Oceanography, University of Rhode Island, South Ferry Road, Narragansett, RI, 02882, USA","institution_ids":["https://openalex.org/I121847817","https://openalex.org/I17626003"]},{"raw_affiliation_string":"The Graduate School of Oceanography, University of Rhode Island, Narragansett, USA","institution_ids":["https://openalex.org/I121847817","https://openalex.org/I17626003"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5037868695","display_name":"LeAnn P. Whitney","orcid":"https://orcid.org/0000-0001-8244-0613"},"institutions":[{"id":"https://openalex.org/I17626003","display_name":"University of Rhode Island","ror":"https://ror.org/013ckk937","country_code":"US","type":"education","lineage":["https://openalex.org/I17626003"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"LeAnn P Whitney","raw_affiliation_strings":["Department of Cell and Molecular Biology, The University of Rhode Island, 120 Flagg Road, Kingston, RI, 02881, USA","Department of Cell and Molecular Biology, The University of Rhode Island, Kingston, USA"],"affiliations":[{"raw_affiliation_string":"Department of Cell and Molecular Biology, The University of Rhode Island, 120 Flagg Road, Kingston, RI, 02881, USA","institution_ids":["https://openalex.org/I17626003"]},{"raw_affiliation_string":"Department of Cell and Molecular Biology, The University of Rhode Island, Kingston, USA","institution_ids":["https://openalex.org/I17626003"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5101770186"],"corresponding_institution_ids":["https://openalex.org/I27804330"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.3843,"has_fulltext":true,"cited_by_count":59,"citation_normalized_percentile":{"value":0.88546482,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"11","issue":"1","first_page":"564","last_page":"564"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9952999949455261,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/bayes-theorem","display_name":"Bayes' theorem","score":0.7313278913497925},{"id":"https://openalex.org/keywords/false-discovery-rate","display_name":"False discovery rate","score":0.6844928860664368},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.646685779094696},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6277198791503906},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5420322418212891},{"id":"https://openalex.org/keywords/sample-size-determination","display_name":"Sample size determination","score":0.515173077583313},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.4685305953025818},{"id":"https://openalex.org/keywords/deep-sequencing","display_name":"Deep sequencing","score":0.4220714271068573},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.35150450468063354},{"id":"https://openalex.org/keywords/bayesian-probability","display_name":"Bayesian probability","score":0.27232664823532104},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2617252469062805},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2525256872177124},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.18838465213775635},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.12129786610603333}],"concepts":[{"id":"https://openalex.org/C207201462","wikidata":"https://www.wikidata.org/wiki/Q182505","display_name":"Bayes' theorem","level":3,"score":0.7313278913497925},{"id":"https://openalex.org/C193244246","wikidata":"https://www.wikidata.org/wiki/Q5432696","display_name":"False discovery rate","level":3,"score":0.6844928860664368},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.646685779094696},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6277198791503906},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5420322418212891},{"id":"https://openalex.org/C129848803","wikidata":"https://www.wikidata.org/wiki/Q2564360","display_name":"Sample size determination","level":2,"score":0.515173077583313},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.4685305953025818},{"id":"https://openalex.org/C132917006","wikidata":"https://www.wikidata.org/wiki/Q5250436","display_name":"Deep sequencing","level":4,"score":0.4220714271068573},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.35150450468063354},{"id":"https://openalex.org/C107673813","wikidata":"https://www.wikidata.org/wiki/Q812534","display_name":"Bayesian probability","level":2,"score":0.27232664823532104},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2617252469062805},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2525256872177124},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18838465213775635},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.12129786610603333},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-11-564","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-564","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-564","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21080965","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21080965","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:digitalcommons.uri.edu:cmb_facpubs-1000","is_oa":true,"landing_page_url":"https://digitalcommons.uri.edu/cmb_facpubs/7","pdf_url":null,"source":{"id":"https://openalex.org/S4377196359","display_name":"Digital Commons - URI (University of Rhode Island)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I17626003","host_organization_name":"University of Rhode Island","host_organization_lineage":["https://openalex.org/I17626003"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Cell and Molecular Biology Faculty Publications","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:bc6fb1775ab942cab88febf065bd5f43","is_oa":true,"landing_page_url":"https://doaj.org/article/bc6fb1775ab942cab88febf065bd5f43","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 564 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3098101","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3098101","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-564","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-564","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-564","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9","score":0.44999998807907104}],"awards":[],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2072349313.pdf","grobid_xml":"https://content.openalex.org/works/W2072349313.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1509684938","https://openalex.org/W1973838650","https://openalex.org/W2037163649","https://openalex.org/W2050386030","https://openalex.org/W2061003492","https://openalex.org/W2061193616","https://openalex.org/W2065912508","https://openalex.org/W2080641985","https://openalex.org/W2081098333","https://openalex.org/W2085915653","https://openalex.org/W2102938424","https://openalex.org/W2105793531","https://openalex.org/W2107564978","https://openalex.org/W2112627990","https://openalex.org/W2114104545","https://openalex.org/W2114504176","https://openalex.org/W2116166762","https://openalex.org/W2119034410","https://openalex.org/W2126398084","https://openalex.org/W2129939060","https://openalex.org/W2131088968","https://openalex.org/W2141425631","https://openalex.org/W2141889578","https://openalex.org/W2145416275","https://openalex.org/W2477373210","https://openalex.org/W4241876622"],"related_works":["https://openalex.org/W2067135330","https://openalex.org/W2069695727","https://openalex.org/W1996185163","https://openalex.org/W1915362844","https://openalex.org/W2084813257","https://openalex.org/W2124644189","https://openalex.org/W2045929470","https://openalex.org/W2081127504","https://openalex.org/W2122223946","https://openalex.org/W4233500668"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":16},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":9}],"updated_date":"2026-03-01T08:55:55.761014","created_date":"2025-10-10T00:00:00"}
