{"id":"https://openalex.org/W1964430425","doi":"https://doi.org/10.1186/1471-2105-11-563","title":"TESTLoc: protein subcellular localization prediction from EST data","display_name":"TESTLoc: protein subcellular localization prediction from EST data","publication_year":2010,"publication_date":"2010-11-15","ids":{"openalex":"https://openalex.org/W1964430425","doi":"https://doi.org/10.1186/1471-2105-11-563","mag":"1964430425","pmid":"https://pubmed.ncbi.nlm.nih.gov/21078192"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-563","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-563","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-563","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-563","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5108536696","display_name":"Yao-Qing Shen","orcid":null},"institutions":[{"id":"https://openalex.org/I4210118410","display_name":"Institut th\u00e9matique G\u00e9n\u00e9tique, g\u00e9nomique et bioinformatique","ror":"https://ror.org/01rfstj90","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I4210118410"]},{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA","FR"],"is_corresponding":true,"raw_author_name":"Yao-Qing Shen","raw_affiliation_strings":["Robert-Cedergren Center for Bioinformatics and Genomics; Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada. yaoqing.shen@umontreal.ca","Robert-Cedergren Center for Bioinformatics and Genomics","Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Robert-Cedergren Center for Bioinformatics and Genomics; Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada. yaoqing.shen@umontreal.ca","institution_ids":["https://openalex.org/I70931966"]},{"raw_affiliation_string":"Robert-Cedergren Center for Bioinformatics and Genomics","institution_ids":["https://openalex.org/I4210118410"]},{"raw_affiliation_string":"Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada","institution_ids":["https://openalex.org/I70931966"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5016440829","display_name":"Gertraud Burger","orcid":"https://orcid.org/0000-0002-8679-8812"},"institutions":[{"id":"https://openalex.org/I4210118410","display_name":"Institut th\u00e9matique G\u00e9n\u00e9tique, g\u00e9nomique et bioinformatique","ror":"https://ror.org/01rfstj90","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488","https://openalex.org/I4210118410"]},{"id":"https://openalex.org/I70931966","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34","country_code":"CA","type":"education","lineage":["https://openalex.org/I70931966"]}],"countries":["CA","FR"],"is_corresponding":false,"raw_author_name":"Gertraud Burger","raw_affiliation_strings":["Robert-Cedergren Center for Bioinformatics and Genomics; Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada","Robert-Cedergren Center for Bioinformatics and Genomics","Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Robert-Cedergren Center for Bioinformatics and Genomics; Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada","institution_ids":["https://openalex.org/I70931966"]},{"raw_affiliation_string":"Robert-Cedergren Center for Bioinformatics and Genomics","institution_ids":["https://openalex.org/I4210118410"]},{"raw_affiliation_string":"Biochemistry Department, Universit\u00e9 de Montr\u00e9al, 2900 Edouard-Montpetit, Montreal, QC, H3T 1J4, Canada","institution_ids":["https://openalex.org/I70931966"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5108536696"],"corresponding_institution_ids":["https://openalex.org/I4210118410","https://openalex.org/I70931966"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.2248,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.77150601,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"11","issue":"1","first_page":"563","last_page":"563"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11103","display_name":"Antimicrobial Peptides and Activities","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/2404","display_name":"Microbiology"},"field":{"id":"https://openalex.org/fields/24","display_name":"Immunology and Microbiology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.0003000000142492354,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/subcellular-localization","display_name":"Subcellular localization","score":0.7005974054336548},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6570870876312256},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.6287010908126831},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.5335085391998291},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.5200257301330566},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.5117875933647156},{"id":"https://openalex.org/keywords/protein-function-prediction","display_name":"Protein function prediction","score":0.4895985722541809},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4809086322784424},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4763736426830292},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4307129383087158},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3398122191429138},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.3156220316886902},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.28926992416381836},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.28279930353164673},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.15526539087295532},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.15362516045570374},{"id":"https://openalex.org/keywords/cytoplasm","display_name":"Cytoplasm","score":0.13039082288742065},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09980353713035583}],"concepts":[{"id":"https://openalex.org/C2776879804","wikidata":"https://www.wikidata.org/wiki/Q7630919","display_name":"Subcellular localization","level":3,"score":0.7005974054336548},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6570870876312256},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.6287010908126831},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.5335085391998291},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.5200257301330566},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.5117875933647156},{"id":"https://openalex.org/C207060522","wikidata":"https://www.wikidata.org/wiki/Q7251473","display_name":"Protein function prediction","level":4,"score":0.4895985722541809},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4809086322784424},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4763736426830292},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4307129383087158},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3398122191429138},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.3156220316886902},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.28926992416381836},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.28279930353164673},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.15526539087295532},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.15362516045570374},{"id":"https://openalex.org/C190062978","wikidata":"https://www.wikidata.org/wiki/Q79899","display_name":"Cytoplasm","level":2,"score":0.13039082288742065},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09980353713035583},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013347","descriptor_name":"Subcellular Fractions","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013347","descriptor_name":"Subcellular Fractions","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013347","descriptor_name":"Subcellular Fractions","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-563","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-563","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-563","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:21078192","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21078192","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:a90e5ec328cb426b8f1438153eab3dcf","is_oa":false,"landing_page_url":"https://doaj.org/article/a90e5ec328cb426b8f1438153eab3dcf","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 563 (2010)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:2026422","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3000424","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-563","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-563","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-563","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.4000000059604645,"display_name":"Life in Land"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309949","display_name":"Canadian Institute for Advanced Research","ror":"https://ror.org/01sdtdd95"},{"id":"https://openalex.org/F4320323175","display_name":"Universit\u00e9 de Montr\u00e9al","ror":"https://ror.org/0161xgx34"},{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1964430425.pdf","grobid_xml":"https://content.openalex.org/works/W1964430425.grobid-xml"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W1556654385","https://openalex.org/W1602584517","https://openalex.org/W1816488618","https://openalex.org/W1973253766","https://openalex.org/W1982228765","https://openalex.org/W1992577925","https://openalex.org/W1996423252","https://openalex.org/W2002364392","https://openalex.org/W2003255960","https://openalex.org/W2010813706","https://openalex.org/W2012352014","https://openalex.org/W2025117991","https://openalex.org/W2025131366","https://openalex.org/W2036029303","https://openalex.org/W2038335468","https://openalex.org/W2041956242","https://openalex.org/W2047977284","https://openalex.org/W2049699895","https://openalex.org/W2055616662","https://openalex.org/W2086758397","https://openalex.org/W2101745615","https://openalex.org/W2107247090","https://openalex.org/W2108898978","https://openalex.org/W2110041134","https://openalex.org/W2110659301","https://openalex.org/W2111127373","https://openalex.org/W2115694019","https://openalex.org/W2115998090","https://openalex.org/W2117987251","https://openalex.org/W2121869529","https://openalex.org/W2124961252","https://openalex.org/W2129974507","https://openalex.org/W2135565251","https://openalex.org/W2136930152","https://openalex.org/W2137335580","https://openalex.org/W2137424160","https://openalex.org/W2142075090","https://openalex.org/W2145957695","https://openalex.org/W2146389940","https://openalex.org/W2148941896","https://openalex.org/W2149822709","https://openalex.org/W2151790371","https://openalex.org/W2152458080","https://openalex.org/W2154916254","https://openalex.org/W2156125289","https://openalex.org/W2156362263","https://openalex.org/W2158173168","https://openalex.org/W2158714788","https://openalex.org/W2160941422","https://openalex.org/W2160979370","https://openalex.org/W2162024319","https://openalex.org/W2162666803","https://openalex.org/W2164395223","https://openalex.org/W2164620224","https://openalex.org/W2169043568","https://openalex.org/W2169432731","https://openalex.org/W2169805130","https://openalex.org/W2170700642","https://openalex.org/W2600206387","https://openalex.org/W2782267736","https://openalex.org/W2970201424","https://openalex.org/W4230640326"],"related_works":["https://openalex.org/W2384110740","https://openalex.org/W2159663778","https://openalex.org/W2374123826","https://openalex.org/W2065993463","https://openalex.org/W2181899571","https://openalex.org/W2135470984","https://openalex.org/W2082535576","https://openalex.org/W1568877569","https://openalex.org/W2015809665","https://openalex.org/W2935275081"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1],"eukaryotic":[2],"cell":[3],"has":[4,55],"an":[5],"intricate":[6],"architecture":[7],"with":[8],"compartments":[9,65],"and":[10,54,66,102,145,157,200],"substructures":[11],"dedicated":[12],"to":[13,37,59,164,197],"particular":[14],"biological":[15],"processes.":[16],"Knowing":[17],"the":[18,39,97,100,165,195],"subcellular":[19,64,121],"location":[20],"of":[21,41,69,99,107,124,192],"proteins":[22,60,125],"not":[23,79],"only":[24],"indicates":[25],"how":[26],"bio-processes":[27],"are":[28,147],"organized":[29],"in":[30],"different":[31,150],"cellular":[32],"compartments,":[33],"but":[34],"also":[35],"contributes":[36],"unravelling":[38],"function":[40],"individual":[42],"proteins.":[43],"Computational":[44],"localization":[45,122,181],"prediction":[46,76,123,182],"is":[47,140,179,201],"possible":[48],"based":[49,126],"on":[50,82,127],"sequence":[51,108,130],"information":[52,109],"alone,":[53],"been":[56],"successfully":[57],"applied":[58,163],"from":[61,90,110,133],"virtually":[62],"all":[63,67],"domains":[68],"life.":[70],"However,":[71],"we":[72],"realized":[73],"that":[74],"current":[75],"tools":[77],"do":[78],"perform":[80],"well":[81],"partial":[83,129],"protein":[84],"sequences":[85],"such":[86,152],"as":[87,142,153],"those":[88],"inferred":[89],"Expressed":[91],"Sequence":[92],"Tag":[93],"(EST)":[94],"data,":[95],"limiting":[96],"exploitation":[98],"large":[101],"taxonomically":[103],"most":[104,166],"comprehensive":[105],"body":[106],"eukaryotes.":[111],"RESULTS:":[112],"We":[113],"developed":[114],"a":[115,180,190],"new":[116],"predictor,":[117],"TESTLoc,":[118],"suited":[119],"for":[120,185,194,203],"their":[128],"conceptually":[131],"translated":[132],"ESTs":[134],"(EST-peptides).":[135],"Support":[136],"Vector":[137],"Machine":[138],"(SVM)":[139],"used":[141],"computational":[143],"method":[144],"EST-peptides":[146],"represented":[148],"by":[149],"features":[151],"amino":[154],"acid":[155],"composition":[156],"physicochemical":[158],"properties.":[159],"When":[160],"TESTLoc":[161,178],"was":[162],"challenging":[167],"test":[168],"case":[169],"(plant":[170],"data),":[171],"it":[172],"yielded":[173],"high":[174],"accuracy":[175],"(~85%).":[176],"CONCLUSIONS:":[177],"tool":[183],"tailored":[184],"EST":[186],"data.":[187],"It":[188],"provides":[189],"variety":[191],"models":[193],"users":[196],"choose":[198],"from,":[199],"available":[202],"download":[204],"at":[205],"http://megasun.bch.umontreal.ca/~shenyq/TESTLoc/TESTLoc.html.":[206]},"counts_by_year":[{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":4}],"updated_date":"2026-05-06T08:25:59.206177","created_date":"2025-10-10T00:00:00"}
