{"id":"https://openalex.org/W2139313089","doi":"https://doi.org/10.1186/1471-2105-11-475","title":"FragViz: visualization of fragmented networks","display_name":"FragViz: visualization of fragmented networks","publication_year":2010,"publication_date":"2010-09-22","ids":{"openalex":"https://openalex.org/W2139313089","doi":"https://doi.org/10.1186/1471-2105-11-475","mag":"2139313089","pmid":"https://pubmed.ncbi.nlm.nih.gov/20860802"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-475","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-475","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-475","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-475","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013965807","display_name":"Miha \u0160tajdohar","orcid":null},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Miha \u0160tajdohar","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana, Slovenia","[Faculty of Computer and Information Science, University of Ljubljana, Slovenia]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"[Faculty of Computer and Information Science, University of Ljubljana, Slovenia]","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063547256","display_name":"Minca Mramor","orcid":null},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":false,"raw_author_name":"Minca Mramor","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana, Slovenia","[Faculty of Computer and Information Science, University of Ljubljana, Slovenia]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"[Faculty of Computer and Information Science, University of Ljubljana, Slovenia]","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073792028","display_name":"Bla\u017e Zupan","orcid":"https://orcid.org/0000-0002-5864-7056"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]},{"id":"https://openalex.org/I181547552","display_name":"Baylor College of Medicine","ror":"https://ror.org/02pttbw34","country_code":"US","type":"education","lineage":["https://openalex.org/I181547552","https://openalex.org/I2801539370"]}],"countries":["SI","US"],"is_corresponding":false,"raw_author_name":"Bla\u017e Zupan","raw_affiliation_strings":["Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA","Faculty of Computer and Information Science, University of Ljubljana, Slovenia","Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA","Faculty of Computer and Information Science, University of Ljubljana, , Slovenia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, USA","institution_ids":["https://openalex.org/I181547552"]},{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, , Slovenia","institution_ids":["https://openalex.org/I153976015"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024075429","display_name":"Janez Dem\u0161ar","orcid":"https://orcid.org/0000-0002-1256-1687"},"institutions":[{"id":"https://openalex.org/I153976015","display_name":"University of Ljubljana","ror":"https://ror.org/05njb9z20","country_code":"SI","type":"education","lineage":["https://openalex.org/I153976015"]}],"countries":["SI"],"is_corresponding":true,"raw_author_name":"Janez Dem\u0161ar","raw_affiliation_strings":["Faculty of Computer and Information Science, University of Ljubljana, Slovenia","[Faculty of Computer and Information Science, University of Ljubljana, Slovenia]"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Faculty of Computer and Information Science, University of Ljubljana, Slovenia","institution_ids":["https://openalex.org/I153976015"]},{"raw_affiliation_string":"[Faculty of Computer and Information Science, University of Ljubljana, Slovenia]","institution_ids":["https://openalex.org/I153976015"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5024075429"],"corresponding_institution_ids":["https://openalex.org/I153976015"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.6473,"has_fulltext":true,"cited_by_count":3,"citation_normalized_percentile":{"value":0.76274447,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"11","issue":"1","first_page":"475","last_page":"475"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.7662000060081482,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10799","display_name":"Data Visualization and Analytics","score":0.7662000060081482,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.10080000013113022,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.026100000366568565,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.8091170787811279},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.763792872428894},{"id":"https://openalex.org/keywords/graph-drawing","display_name":"Graph drawing","score":0.7308652400970459},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4883810877799988},{"id":"https://openalex.org/keywords/network-analysis","display_name":"Network analysis","score":0.460714191198349},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.44888603687286377},{"id":"https://openalex.org/keywords/network-element","display_name":"Network element","score":0.41541799902915955},{"id":"https://openalex.org/keywords/distributed-computing","display_name":"Distributed computing","score":0.38699352741241455},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.14713796973228455},{"id":"https://openalex.org/keywords/engineering","display_name":"Engineering","score":0.07736441493034363}],"concepts":[{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.8091170787811279},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.763792872428894},{"id":"https://openalex.org/C112953755","wikidata":"https://www.wikidata.org/wiki/Q739462","display_name":"Graph drawing","level":3,"score":0.7308652400970459},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4883810877799988},{"id":"https://openalex.org/C32946077","wikidata":"https://www.wikidata.org/wiki/Q618079","display_name":"Network analysis","level":2,"score":0.460714191198349},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.44888603687286377},{"id":"https://openalex.org/C129119673","wikidata":"https://www.wikidata.org/wiki/Q4418003","display_name":"Network element","level":2,"score":0.41541799902915955},{"id":"https://openalex.org/C120314980","wikidata":"https://www.wikidata.org/wiki/Q180634","display_name":"Distributed computing","level":1,"score":0.38699352741241455},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.14713796973228455},{"id":"https://openalex.org/C127413603","wikidata":"https://www.wikidata.org/wiki/Q11023","display_name":"Engineering","level":0,"score":0.07736441493034363},{"id":"https://openalex.org/C119599485","wikidata":"https://www.wikidata.org/wiki/Q43035","display_name":"Electrical engineering","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007938","descriptor_name":"Leukemia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007938","descriptor_name":"Leukemia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007938","descriptor_name":"Leukemia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007938","descriptor_name":"Leukemia","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049490","descriptor_name":"Systems Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-475","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-475","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-475","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20860802","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20860802","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:ffa1f396987548b8a6877e7b7d64c604","is_oa":false,"landing_page_url":"https://doaj.org/article/ffa1f396987548b8a6877e7b7d64c604","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 475 (2010)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:1967290","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2955700","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-475","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-475","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-475","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5197067802","display_name":"Tehnologije znanj za odkrivanje novih zdravilnih u\u010dinkovin: analiza in na\u010drtovnje eksperimentov v visokozmogljivostni genetiki (Slovene)","funder_award_id":"L2-1112","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"},{"id":"https://openalex.org/G5769677123","display_name":"Artificial Intelligence and Intelligent Systems","funder_award_id":"P2-0209","funder_id":"https://openalex.org/F4320322554","funder_display_name":"Javna Agencija za Raziskovalno Dejavnost RS"}],"funders":[{"id":"https://openalex.org/F4320322554","display_name":"Javna Agencija za Raziskovalno Dejavnost RS","ror":"https://ror.org/059bp8k51"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2139313089.pdf","grobid_xml":"https://content.openalex.org/works/W2139313089.grobid-xml"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W172019652","https://openalex.org/W361578455","https://openalex.org/W1020953626","https://openalex.org/W1490453899","https://openalex.org/W1508416409","https://openalex.org/W1509608128","https://openalex.org/W1565377632","https://openalex.org/W1967173952","https://openalex.org/W1977135194","https://openalex.org/W1993436046","https://openalex.org/W2004159986","https://openalex.org/W2016833582","https://openalex.org/W2024839376","https://openalex.org/W2034269086","https://openalex.org/W2055801681","https://openalex.org/W2059985735","https://openalex.org/W2075220720","https://openalex.org/W2080526455","https://openalex.org/W2083045667","https://openalex.org/W2088320215","https://openalex.org/W2095956310","https://openalex.org/W2097223338","https://openalex.org/W2103017472","https://openalex.org/W2108238425","https://openalex.org/W2109363337","https://openalex.org/W2111104903","https://openalex.org/W2112090702","https://openalex.org/W2122863289","https://openalex.org/W2126602684","https://openalex.org/W2130410032","https://openalex.org/W2145486327","https://openalex.org/W2147468287","https://openalex.org/W2151933245","https://openalex.org/W2153490111","https://openalex.org/W2153577994","https://openalex.org/W2154699792","https://openalex.org/W2155901243","https://openalex.org/W2166043581","https://openalex.org/W2167252678","https://openalex.org/W2167482691","https://openalex.org/W2169065610","https://openalex.org/W2229908198","https://openalex.org/W2482589566","https://openalex.org/W2971494671","https://openalex.org/W4239775701","https://openalex.org/W4246354968"],"related_works":["https://openalex.org/W2346931493","https://openalex.org/W2903996962","https://openalex.org/W4312076339","https://openalex.org/W2798726020","https://openalex.org/W45302457","https://openalex.org/W2068726676","https://openalex.org/W4388097011","https://openalex.org/W2294734161","https://openalex.org/W404749220","https://openalex.org/W2114780358"],"abstract_inverted_index":{"BACKGROUND:":[0],"Researchers":[1],"in":[2,95,164],"systems":[3],"biology":[4],"use":[5],"network":[6,23,54,69,97,117,134],"visualization":[7,140,186],"to":[8,30,39,42,99,155],"summarize":[9],"the":[10,31,34,43,79,84,89,96,103,107,169,185,204,211],"results":[11],"of":[12,33,45,83,148,187,210],"their":[13,93,100],"analysis.":[14],"Such":[15],"networks":[16,110],"often":[17],"include":[18],"unconnected":[19,68,199],"components,":[20],"which":[21,60,119,191],"popular":[22],"alignment":[24],"algorithms":[25,153,193],"place":[26],"arbitrarily":[27],"with":[28,106],"respect":[29],"rest":[32],"network.":[35],"This":[36],"can":[37,61,115,161],"lead":[38],"misinterpretations":[40],"due":[41],"proximity":[44,94],"otherwise":[46],"unrelated":[47],"elements.":[48],"RESULTS:":[49],"We":[50],"propose":[51],"a":[52,73],"new":[53],"layout":[55,135,175],"optimization":[56,136,176],"technique":[57,177],"called":[58],"FragViz":[59,114,178],"incorporate":[62],"additional":[63,125],"information":[64,126],"on":[65,142,206],"relations":[66],"between":[67,198],"components.":[70,200],"It":[71],"uses":[72],"two-step":[74],"approach":[75],"by":[76,168],"first":[77],"arranging":[78],"nodes":[80],"within":[81],"each":[82],"components":[85,90],"and":[86,123,182,208],"then":[87],"placing":[88],"so":[91,158],"that":[92,113,127,159],"corresponds":[98],"relatedness.":[101],"In":[102],"experimental":[104],"study":[105],"leukemia":[108],"gene":[109],"we":[111],"demonstrate":[112],"obtain":[116],"layouts":[118],"are":[120],"more":[121],"interpretable":[122],"hold":[124],"could":[128],"not":[129,195],"be":[130,156,162],"exposed":[131],"using":[132],"classical":[133],"algorithms.":[137],"CONCLUSIONS:":[138],"Network":[139],"relies":[141],"computational":[143],"techniques":[144],"for":[145,190],"proper":[146],"placement":[147],"objects":[149],"under":[150],"consideration.":[151],"These":[152],"need":[154],"fast":[157],"they":[160],"incorporated":[163],"responsive":[165],"interfaces":[166],"required":[167],"explorative":[170],"data":[171],"analysis":[172],"environments.":[173],"Our":[174],"meets":[179],"these":[180],"requirements":[181],"specifically":[183],"addresses":[184],"fragmented":[188],"networks,":[189],"standard":[192],"do":[194],"consider":[196],"similarities":[197],"The":[201],"experiments":[202],"confirmed":[203],"claims":[205],"speed":[207],"accuracy":[209],"proposed":[212],"solution.":[213]},"counts_by_year":[{"year":2015,"cited_by_count":1},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
