{"id":"https://openalex.org/W2125456570","doi":"https://doi.org/10.1186/1471-2105-11-461","title":"Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions","display_name":"Pan-genome sequence analysis using Panseq: an online tool for the rapid analysis of core and accessory genomic regions","publication_year":2010,"publication_date":"2010-09-15","ids":{"openalex":"https://openalex.org/W2125456570","doi":"https://doi.org/10.1186/1471-2105-11-461","mag":"2125456570","pmid":"https://pubmed.ncbi.nlm.nih.gov/20843356"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-461","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-461","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-461","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-461","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057582762","display_name":"Chad Laing","orcid":"https://orcid.org/0000-0003-1162-257X"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"Chad Laing","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066902916","display_name":"Cody Buchanan","orcid":"https://orcid.org/0000-0001-7258-7275"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Cody Buchanan","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084125590","display_name":"Eduardo N. Taboada","orcid":"https://orcid.org/0000-0001-8373-3653"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Eduardo N Taboada","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025305703","display_name":"Yongxiang Zhang","orcid":"https://orcid.org/0000-0002-9477-7798"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Yongxiang Zhang","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081057604","display_name":"Andrew M. Kropinski","orcid":"https://orcid.org/0000-0002-6871-6799"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Andrew Kropinski","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, ON, Canada","\u2002Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, ON, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"\u2002Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090367021","display_name":"Andr\u00e9 Villegas","orcid":null},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Andre Villegas","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, ON, Canada","\u2002Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, ON, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"\u2002Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Guelph, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112445294","display_name":"James E. Thomas","orcid":null},"institutions":[{"id":"https://openalex.org/I107949126","display_name":"University of Lethbridge","ror":"https://ror.org/044j76961","country_code":"CA","type":"education","lineage":["https://openalex.org/I107949126"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"James E Thomas","raw_affiliation_strings":["Faculty of Biological Sciences, University of Lethbridge, Lethbridge, AB, Canada","Faculty of Biological Sciences, University of Lethbridge, Lethbridge, Canada"],"affiliations":[{"raw_affiliation_string":"Faculty of Biological Sciences, University of Lethbridge, Lethbridge, AB, Canada","institution_ids":["https://openalex.org/I107949126"]},{"raw_affiliation_string":"Faculty of Biological Sciences, University of Lethbridge, Lethbridge, Canada","institution_ids":["https://openalex.org/I107949126"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5021152702","display_name":"Victor P. J. Gannon","orcid":"https://orcid.org/0000-0001-6064-405X"},"institutions":[{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Victor PJ Gannon","raw_affiliation_strings":["Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada"],"affiliations":[{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, AB, Canada","institution_ids":["https://openalex.org/I177235860"]},{"raw_affiliation_string":"Laboratory for Foodborne Zoonoses, Public Health Agency of Canada, Lethbridge, Canada","institution_ids":["https://openalex.org/I177235860"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5057582762"],"corresponding_institution_ids":["https://openalex.org/I177235860"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.5161,"has_fulltext":true,"cited_by_count":303,"citation_normalized_percentile":{"value":0.9329021,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"11","issue":"1","first_page":"461","last_page":"461"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10943","display_name":"Escherichia coli research studies","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1310","display_name":"Endocrinology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10486","display_name":"Salmonella and Campylobacter epidemiology","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.8102193474769592},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.790979266166687},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6516941785812378},{"id":"https://openalex.org/keywords/multilocus-sequence-typing","display_name":"Multilocus sequence typing","score":0.5551700592041016},{"id":"https://openalex.org/keywords/locus","display_name":"Locus (genetics)","score":0.517695426940918},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.47955963015556335},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.44932398200035095},{"id":"https://openalex.org/keywords/bacterial-genome-size","display_name":"Bacterial genome size","score":0.44687822461128235},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.4286404550075531},{"id":"https://openalex.org/keywords/whole-genome-sequencing","display_name":"Whole genome sequencing","score":0.4268408715724945},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4156959354877472},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3893581032752991},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.14411872625350952}],"concepts":[{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.8102193474769592},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.790979266166687},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6516941785812378},{"id":"https://openalex.org/C77434933","wikidata":"https://www.wikidata.org/wiki/Q4043440","display_name":"Multilocus sequence typing","level":4,"score":0.5551700592041016},{"id":"https://openalex.org/C84597430","wikidata":"https://www.wikidata.org/wiki/Q106227","display_name":"Locus (genetics)","level":3,"score":0.517695426940918},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.47955963015556335},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.44932398200035095},{"id":"https://openalex.org/C3742359","wikidata":"https://www.wikidata.org/wiki/Q4839988","display_name":"Bacterial genome size","level":4,"score":0.44687822461128235},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.4286404550075531},{"id":"https://openalex.org/C24432333","wikidata":"https://www.wikidata.org/wiki/Q2068526","display_name":"Whole genome sequencing","level":4,"score":0.4268408715724945},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4156959354877472},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3893581032752991},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.14411872625350952},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004269","descriptor_name":"DNA, Bacterial","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019453","descriptor_name":"Escherichia coli O157","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019453","descriptor_name":"Escherichia coli O157","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019453","descriptor_name":"Escherichia coli O157","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-461","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-461","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-461","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20843356","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20843356","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:17bd34d2dd48438498642a6279d811ed","is_oa":true,"landing_page_url":"https://doaj.org/article/17bd34d2dd48438498642a6279d811ed","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 461 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2949892","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2949892","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-461","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-461","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-461","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities","score":0.7300000190734863}],"awards":[],"funders":[{"id":"https://openalex.org/F4320311580","display_name":"Canadian Food Inspection Agency","ror":"https://ror.org/00qxr8t08"},{"id":"https://openalex.org/F4320312568","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37"},{"id":"https://openalex.org/F4320320853","display_name":"Public Health Agency","ror":"https://ror.org/03ek62e72"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2125456570.pdf","grobid_xml":"https://content.openalex.org/works/W2125456570.grobid-xml"},"referenced_works_count":53,"referenced_works":["https://openalex.org/W93221006","https://openalex.org/W1519781644","https://openalex.org/W1546639740","https://openalex.org/W1956137100","https://openalex.org/W1967229113","https://openalex.org/W1977643851","https://openalex.org/W1988617659","https://openalex.org/W1991330646","https://openalex.org/W2010045259","https://openalex.org/W2015292449","https://openalex.org/W2019386061","https://openalex.org/W2038778059","https://openalex.org/W2039987645","https://openalex.org/W2041257508","https://openalex.org/W2045765967","https://openalex.org/W2055615325","https://openalex.org/W2058839892","https://openalex.org/W2064452752","https://openalex.org/W2089835122","https://openalex.org/W2091708538","https://openalex.org/W2092768265","https://openalex.org/W2095558317","https://openalex.org/W2096018607","https://openalex.org/W2096525273","https://openalex.org/W2100412820","https://openalex.org/W2106882534","https://openalex.org/W2107282968","https://openalex.org/W2109448478","https://openalex.org/W2112113834","https://openalex.org/W2116513121","https://openalex.org/W2124846410","https://openalex.org/W2125302790","https://openalex.org/W2127641304","https://openalex.org/W2132926880","https://openalex.org/W2135146244","https://openalex.org/W2139627484","https://openalex.org/W2142657063","https://openalex.org/W2144362290","https://openalex.org/W2150550043","https://openalex.org/W2150934173","https://openalex.org/W2152821544","https://openalex.org/W2156103113","https://openalex.org/W2158714788","https://openalex.org/W2161118925","https://openalex.org/W2168370942","https://openalex.org/W2171918702","https://openalex.org/W2325733589","https://openalex.org/W2466136626","https://openalex.org/W2772934464","https://openalex.org/W3199943451","https://openalex.org/W4211208250","https://openalex.org/W4231041617","https://openalex.org/W4297585095"],"related_works":["https://openalex.org/W2941777425","https://openalex.org/W2132072542","https://openalex.org/W2030437188","https://openalex.org/W2145001255","https://openalex.org/W1898047497","https://openalex.org/W2396926696","https://openalex.org/W2569062348","https://openalex.org/W2111685015","https://openalex.org/W2275684745","https://openalex.org/W2185086809"],"abstract_inverted_index":{"Panseq":[0,7],"is":[1,8],"freely":[2],"available":[3],"online":[4],"at":[5],"http://76.70.11.198/panseq.":[6],"written":[9],"in":[10],"Perl.":[11]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":10},{"year":2023,"cited_by_count":21},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":26},{"year":2020,"cited_by_count":52},{"year":2019,"cited_by_count":22},{"year":2018,"cited_by_count":29},{"year":2017,"cited_by_count":21},{"year":2016,"cited_by_count":24},{"year":2015,"cited_by_count":23},{"year":2014,"cited_by_count":23},{"year":2013,"cited_by_count":11},{"year":2012,"cited_by_count":8}],"updated_date":"2026-03-25T14:56:36.534964","created_date":"2025-10-10T00:00:00"}