{"id":"https://openalex.org/W2132641702","doi":"https://doi.org/10.1186/1471-2105-11-421","title":"Microarray meta-analysis database (M2DB): a uniformly pre-processed, quality controlled, and manually curated human clinical microarray database","display_name":"Microarray meta-analysis database (M2DB): a uniformly pre-processed, quality controlled, and manually curated human clinical microarray database","publication_year":2010,"publication_date":"2010-08-10","ids":{"openalex":"https://openalex.org/W2132641702","doi":"https://doi.org/10.1186/1471-2105-11-421","mag":"2132641702","pmid":"https://pubmed.ncbi.nlm.nih.gov/20698961"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-421","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-421","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-421","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-421","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068185287","display_name":"Wei\u2010Chung Cheng","orcid":"https://orcid.org/0000-0002-1229-4857"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Wei-Chung Cheng","raw_affiliation_strings":["Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, Hsinchu, Taiwan","Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, Hsinchu, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046987315","display_name":"Min\u2010Lung Tsai","orcid":null},"institutions":[{"id":"https://openalex.org/I77199428","display_name":"National Taiwan Sport University","ror":"https://ror.org/01zjvhn75","country_code":"TW","type":"education","lineage":["https://openalex.org/I77199428"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Min-Lung Tsai","raw_affiliation_strings":["Institute of Athletics, National Taiwan Sport University, No. 16, Section 1, Shuan-Shih Road, Taichung, 404, Taiwan","Institute of Athletics, National Taiwan Sport University, Taichung, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Athletics, National Taiwan Sport University, No. 16, Section 1, Shuan-Shih Road, Taichung, 404, Taiwan","institution_ids":["https://openalex.org/I77199428"]},{"raw_affiliation_string":"Institute of Athletics, National Taiwan Sport University, Taichung, Taiwan","institution_ids":["https://openalex.org/I77199428"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069362388","display_name":"Cheng-Wei Chang","orcid":"https://orcid.org/0000-0001-8175-8291"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Cheng-Wei Chang","raw_affiliation_strings":["Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086085037","display_name":"Ching-Lung Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ching-Lung Huang","raw_affiliation_strings":["Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043434274","display_name":"Chaang-Ray Chen","orcid":"https://orcid.org/0000-0003-2106-8699"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chaang-Ray Chen","raw_affiliation_strings":["Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044355777","display_name":"Wun\u2010Yi Shu","orcid":"https://orcid.org/0000-0002-3724-5410"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Wun-Yi Shu","raw_affiliation_strings":["Institute of Statistics, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","Institute of Statistics, National Tsing\u2010Hua University Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Statistics, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Institute of Statistics, National Tsing\u2010Hua University Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042815543","display_name":"Yun\u2010Shien Lee","orcid":"https://orcid.org/0000-0001-9617-335X"},"institutions":[{"id":"https://openalex.org/I192703390","display_name":"Ming Chuan University","ror":"https://ror.org/02pgvzy25","country_code":"TW","type":"education","lineage":["https://openalex.org/I192703390"]},{"id":"https://openalex.org/I3020100970","display_name":"Chang Gung Memorial Hospital","ror":"https://ror.org/02verss31","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I3020100970"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yun-Shien Lee","raw_affiliation_strings":["Department of Biotechnology, Ming Chuan University, 5 De Ming Rd., Gui Shan District, Taoyuan, 333, Taiwan","Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, No.5, Fuxing St., Taoyuan, 333, Taiwan","Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, Taoyuan, Taiwan","Department of Biotechnology, Ming Chuan University, Taoyuan, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biotechnology, Ming Chuan University, 5 De Ming Rd., Gui Shan District, Taoyuan, 333, Taiwan","institution_ids":["https://openalex.org/I192703390"]},{"raw_affiliation_string":"Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, No.5, Fuxing St., Taoyuan, 333, Taiwan","institution_ids":["https://openalex.org/I3020100970"]},{"raw_affiliation_string":"Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, Taoyuan, Taiwan","institution_ids":["https://openalex.org/I3020100970"]},{"raw_affiliation_string":"Department of Biotechnology, Ming Chuan University, Taoyuan, Taiwan","institution_ids":["https://openalex.org/I192703390"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072379956","display_name":"Tzu\u2010Hao Wang","orcid":"https://orcid.org/0000-0002-1418-7684"},"institutions":[{"id":"https://openalex.org/I173093425","display_name":"Chang Gung University","ror":"https://ror.org/00d80zx46","country_code":"TW","type":"education","lineage":["https://openalex.org/I173093425"]},{"id":"https://openalex.org/I3020100970","display_name":"Chang Gung Memorial Hospital","ror":"https://ror.org/02verss31","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I3020100970"]},{"id":"https://openalex.org/I4210116208","display_name":"Linkou Chang Gung Memorial Hospital","ror":"https://ror.org/02dnn6q67","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I3020100970","https://openalex.org/I4210116208"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Tzu-Hao Wang","raw_affiliation_strings":["Department of Obstetrics and Gynecology, Lin-Kou Medical Center, Chang Gung Memorial Hospital and Chang Gung University, No.5, Fuxing St., Taoyuan, 333, Taiwan","Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, No.5, Fuxing St., Taoyuan, 333, Taiwan","Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, Taoyuan, Taiwan","Department of Obstetrics and Gynecology, Lin-Kou Medical Center, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Lin-Kou Medical Center, Chang Gung Memorial Hospital and Chang Gung University, No.5, Fuxing St., Taoyuan, 333, Taiwan","institution_ids":["https://openalex.org/I3020100970","https://openalex.org/I4210116208","https://openalex.org/I173093425"]},{"raw_affiliation_string":"Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, No.5, Fuxing St., Taoyuan, 333, Taiwan","institution_ids":["https://openalex.org/I3020100970"]},{"raw_affiliation_string":"Genomic Medicine Research Core Laboratory, Chang Gung Memorial Hospital, Taoyuan, Taiwan","institution_ids":["https://openalex.org/I3020100970"]},{"raw_affiliation_string":"Department of Obstetrics and Gynecology, Lin-Kou Medical Center, Chang Gung Memorial Hospital and Chang Gung University, Taoyuan, Taiwan","institution_ids":["https://openalex.org/I173093425","https://openalex.org/I3020100970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065720039","display_name":"Ji\u2010Hong Hong","orcid":"https://orcid.org/0000-0002-1601-6555"},"institutions":[{"id":"https://openalex.org/I173093425","display_name":"Chang Gung University","ror":"https://ror.org/00d80zx46","country_code":"TW","type":"education","lineage":["https://openalex.org/I173093425"]},{"id":"https://openalex.org/I3020100970","display_name":"Chang Gung Memorial Hospital","ror":"https://ror.org/02verss31","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I3020100970"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ji-Hong Hong","raw_affiliation_strings":["Department of Medical Imaging and Radiological Science, Chang Gung University, No.259 Wen-Hwa 1st Road, Kwei-Shan, Taoyuan, 333, Taiwan","Department of Radiation Oncology, Chang Gung Memorial Hospital, No.5, Fuxing St., Taoyuan, 333, Taiwan","Department of Medical Imaging and Radiological Science Chang Gung University Taoyuan Taiwan","Department of Radiation Oncology; Chang Gung Memorial Hospital; Taoyuan Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Imaging and Radiological Science, Chang Gung University, No.259 Wen-Hwa 1st Road, Kwei-Shan, Taoyuan, 333, Taiwan","institution_ids":["https://openalex.org/I173093425"]},{"raw_affiliation_string":"Department of Radiation Oncology, Chang Gung Memorial Hospital, No.5, Fuxing St., Taoyuan, 333, Taiwan","institution_ids":["https://openalex.org/I3020100970"]},{"raw_affiliation_string":"Department of Medical Imaging and Radiological Science Chang Gung University Taoyuan Taiwan","institution_ids":["https://openalex.org/I173093425"]},{"raw_affiliation_string":"Department of Radiation Oncology; Chang Gung Memorial Hospital; Taoyuan Taiwan","institution_ids":["https://openalex.org/I3020100970"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039476669","display_name":"Chia\u2010Yang Li","orcid":"https://orcid.org/0000-0001-5689-9850"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chia-Yang Li","raw_affiliation_strings":["Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5033688509","display_name":"Ian C. Hsu","orcid":"https://orcid.org/0000-0003-2782-9997"},"institutions":[{"id":"https://openalex.org/I25846049","display_name":"National Tsing Hua University","ror":"https://ror.org/00zdnkx70","country_code":"TW","type":"education","lineage":["https://openalex.org/I25846049"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Ian C Hsu","raw_affiliation_strings":["Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences, National Tsing Hua University, No. 101, Section 2, Kuang-Fu Road, Hsinchu, 300, Taiwan","institution_ids":["https://openalex.org/I25846049"]},{"raw_affiliation_string":"Department of Biomedical Engineering and Environmental Sciences National Tsing-Hua University  Hsinchu Taiwan","institution_ids":["https://openalex.org/I25846049"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5068185287"],"corresponding_institution_ids":["https://openalex.org/I25846049"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.3139,"has_fulltext":true,"cited_by_count":36,"citation_normalized_percentile":{"value":0.88311258,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"421","last_page":"421"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9846000075340271,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9846000075340271,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.001500000013038516,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12867","display_name":"Advanced Biosensing Techniques and Applications","score":0.001500000013038516,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microarray-databases","display_name":"Microarray databases","score":0.761725127696991},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.752302885055542},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.6429455876350403},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6365699768066406},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.5513241291046143},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4978969097137451},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.44478708505630493},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.44342273473739624},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.429298996925354},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4166561961174011},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.4141862094402313},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1390245258808136},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.13731634616851807}],"concepts":[{"id":"https://openalex.org/C548314002","wikidata":"https://www.wikidata.org/wiki/Q6839218","display_name":"Microarray databases","level":5,"score":0.761725127696991},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.752302885055542},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.6429455876350403},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6365699768066406},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.5513241291046143},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4978969097137451},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.44478708505630493},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.44342273473739624},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.429298996925354},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4166561961174011},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.4141862094402313},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1390245258808136},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.13731634616851807},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011786","descriptor_name":"Quality Control","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015201","descriptor_name":"Meta-Analysis as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015201","descriptor_name":"Meta-Analysis as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015201","descriptor_name":"Meta-Analysis as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020411","descriptor_name":"Oligonucleotide Array Sequence Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-421","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-421","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-421","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20698961","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20698961","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:891a123bd55247818a693aece3d06421","is_oa":false,"landing_page_url":"https://doaj.org/article/891a123bd55247818a693aece3d06421","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 421 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2928207","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2928207","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-421","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-421","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-421","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2132641702.pdf","grobid_xml":"https://content.openalex.org/works/W2132641702.grobid-xml"},"referenced_works_count":59,"referenced_works":["https://openalex.org/W1523843467","https://openalex.org/W1544923801","https://openalex.org/W1551744077","https://openalex.org/W1966532209","https://openalex.org/W1967668617","https://openalex.org/W1968242645","https://openalex.org/W1973614663","https://openalex.org/W1977008606","https://openalex.org/W1977474286","https://openalex.org/W1977918192","https://openalex.org/W1987057619","https://openalex.org/W1987949408","https://openalex.org/W1996353320","https://openalex.org/W1998671175","https://openalex.org/W2002259113","https://openalex.org/W2010637767","https://openalex.org/W2020541351","https://openalex.org/W2024853484","https://openalex.org/W2028453610","https://openalex.org/W2054958397","https://openalex.org/W2074092657","https://openalex.org/W2084339467","https://openalex.org/W2086835855","https://openalex.org/W2090683547","https://openalex.org/W2098574180","https://openalex.org/W2099432911","https://openalex.org/W2100471807","https://openalex.org/W2100744492","https://openalex.org/W2101177856","https://openalex.org/W2101696428","https://openalex.org/W2102317785","https://openalex.org/W2106945333","https://openalex.org/W2107665951","https://openalex.org/W2114496328","https://openalex.org/W2124201592","https://openalex.org/W2124640147","https://openalex.org/W2128557431","https://openalex.org/W2130383124","https://openalex.org/W2131438131","https://openalex.org/W2131660156","https://openalex.org/W2132854417","https://openalex.org/W2140226087","https://openalex.org/W2141009231","https://openalex.org/W2142101030","https://openalex.org/W2147098034","https://openalex.org/W2147353173","https://openalex.org/W2148974291","https://openalex.org/W2152147743","https://openalex.org/W2154981570","https://openalex.org/W2158940923","https://openalex.org/W2159751674","https://openalex.org/W2160354730","https://openalex.org/W2160697532","https://openalex.org/W2162871532","https://openalex.org/W2167361714","https://openalex.org/W2168113705","https://openalex.org/W2170989872","https://openalex.org/W2172165869","https://openalex.org/W4253759977"],"related_works":["https://openalex.org/W2972511296","https://openalex.org/W2943416042","https://openalex.org/W1544923801","https://openalex.org/W3152114242","https://openalex.org/W77579337","https://openalex.org/W2490137852","https://openalex.org/W2056932428","https://openalex.org/W3023720143","https://openalex.org/W1483316219","https://openalex.org/W2412120523"],"abstract_inverted_index":{"BACKGROUND:":[0],"Over":[1],"the":[2,156,180],"past":[3],"decade,":[4],"gene":[5],"expression":[6],"microarray":[7,39,49,71,248],"studies":[8],"have":[9],"greatly":[10],"expanded":[11],"our":[12],"knowledge":[13],"of":[14,17,21,24,44,85,96,124,161,199,236,247],"genetic":[15],"mechanisms":[16],"human":[18,69,112],"diseases.":[19],"Meta-analysis":[20],"substantial":[22],"amounts":[23],"accumulated":[25],"data,":[26,91],"by":[27,139],"integrating":[28],"valuable":[29],"information":[30,80,144],"from":[31,47,146,179,187],"multiple":[32],"studies,":[33],"is":[34,67],"becoming":[35],"more":[36,102],"important":[37],"in":[38],"research.":[40],"However,":[41],"collecting":[42],"data":[43,59,173,195,201,217],"special":[45],"interest":[46],"public":[48],"repositories":[50],"often":[51],"present":[52],"major":[53],"practical":[54],"problems.":[55],"Moreover,":[56],"including":[57],"low-quality":[58],"may":[60],"significantly":[61],"reduce":[62],"meta-analysis":[63],"efficiency.":[64],"RESULTS:":[65],"M2DB":[66,115,205],"a":[68,94,121,207,228],"curated":[70,138],"database":[72,100,226],"designed":[73],"for":[74,82,190,202,210],"easy":[75],"querying,":[76],"based":[77,142],"on":[78,143],"clinical":[79,113,126,214,223],"and":[81,131,149,193,196,216,232],"interactive":[83],"retrieval":[84],"either":[86],"raw":[87,194],"or":[88],"uniformly":[89],"pre-processed":[90,200],"along":[92],"with":[93,171],"set":[95],"quality-control":[97],"metrics.":[98],"The":[99,183],"contains":[101],"than":[103],"10,000":[104],"previously":[105],"published":[106,150],"Affymetrix":[107],"GeneChip":[108],"arrays,":[109],"performed":[110],"using":[111,165],"specimens.":[114],"allows":[116],"online":[117,157],"querying":[118],"according":[119],"to":[120,219],"flexible":[122],"combination":[123],"five":[125],"annotations":[127,135],"describing":[128],"disease":[129],"state":[130],"sampling":[132],"location.":[133],"These":[134],"were":[136],"manually":[137],"controlled":[140],"vocabularies,":[141],"obtained":[145],"GEO,":[147],"ArrayExpress,":[148],"papers.":[151],"For":[152],"array-based":[153],"assessment":[154],"control,":[155],"query":[158,181,184],"provides":[159,185,227],"sets":[160],"QC":[162,168,211],"metrics,":[163],"generated":[164],"three":[166,197],"available":[167],"algorithms.":[169],"Arrays":[170],"poor":[172],"quality":[174],"can":[175],"easily":[176],"be":[177],"excluded":[178],"interface.":[182],"values":[186],"two":[188],"algorithms":[189],"gene-based":[191],"filtering,":[192],"kinds":[198],"downloading.":[203],"CONCLUSION:":[204],"utilizes":[206],"user-friendly":[208],"interface":[209],"parameters,":[212],"sample":[213],"annotations,":[215],"formats":[218],"help":[220],"users":[221],"obtain":[222],"metadata.":[224],"This":[225],"lower":[229],"entry":[230],"threshold":[231],"an":[233],"integrated":[234],"process":[235],"meta-analysis.":[237,249],"We":[238],"hope":[239],"that":[240],"this":[241],"research":[242],"will":[243],"promote":[244],"further":[245],"evolution":[246]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":9}],"updated_date":"2026-05-21T09:19:25.381259","created_date":"2025-10-10T00:00:00"}
