{"id":"https://openalex.org/W2063291655","doi":"https://doi.org/10.1186/1471-2105-11-365","title":"Knowledge-based annotation of small molecule binding sites in proteins","display_name":"Knowledge-based annotation of small molecule binding sites in proteins","publication_year":2010,"publication_date":"2010-07-01","ids":{"openalex":"https://openalex.org/W2063291655","doi":"https://doi.org/10.1186/1471-2105-11-365","mag":"2063291655","pmid":"https://pubmed.ncbi.nlm.nih.gov/20594344"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-365","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-365","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-365","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-365","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088801215","display_name":"Ratna R. Thangudu","orcid":"https://orcid.org/0000-0001-6765-0401"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ratna R Thangudu","raw_affiliation_strings":["National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD 20894, USA","National Center for Biotechnology Information, Bethesda, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD 20894, USA","institution_ids":[]},{"raw_affiliation_string":"National Center for Biotechnology Information, Bethesda, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035042265","display_name":"Manoj Tyagi","orcid":"https://orcid.org/0009-0002-8087-0542"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Manoj Tyagi","raw_affiliation_strings":["National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","National Center for Biotechnology Information, Bethesda, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","institution_ids":["https://openalex.org/I4210109390"]},{"raw_affiliation_string":"National Center for Biotechnology Information, Bethesda, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5002683484","display_name":"Benjamin A. Shoemaker","orcid":"https://orcid.org/0000-0002-1356-285X"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Benjamin A Shoemaker","raw_affiliation_strings":["National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","National Center for Biotechnology Information, Bethesda, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","institution_ids":["https://openalex.org/I4210109390"]},{"raw_affiliation_string":"National Center for Biotechnology Information, Bethesda, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040349721","display_name":"Stephen H. Bryant","orcid":null},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen H Bryant","raw_affiliation_strings":["National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","National Center for Biotechnology Information, Bethesda, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","institution_ids":["https://openalex.org/I4210109390"]},{"raw_affiliation_string":"National Center for Biotechnology Information, Bethesda, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055860373","display_name":"Anna R. Panchenko","orcid":"https://orcid.org/0000-0003-3104-1131"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anna R Panchenko","raw_affiliation_strings":["National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","National Center for Biotechnology Information, Bethesda, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","institution_ids":["https://openalex.org/I4210109390"]},{"raw_affiliation_string":"National Center for Biotechnology Information, Bethesda, USA","institution_ids":["https://openalex.org/I4210109390"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5035501070","display_name":"Thomas Madej","orcid":null},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Madej","raw_affiliation_strings":["National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","National Center for Biotechnology Information, Bethesda, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, 8600 Rockville Pike, Building 38A, Bethesda, MD, 20894, USA","institution_ids":["https://openalex.org/I4210109390"]},{"raw_affiliation_string":"National Center for Biotechnology Information, Bethesda, USA","institution_ids":["https://openalex.org/I4210109390"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5088801215"],"corresponding_institution_ids":["https://openalex.org/I4210109390"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.8924,"has_fulltext":true,"cited_by_count":18,"citation_normalized_percentile":{"value":0.85093515,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"11","issue":"1","first_page":"365","last_page":"365"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5992421507835388},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5521860122680664},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5265324711799622},{"id":"https://openalex.org/keywords/small-molecule","display_name":"Small molecule","score":0.4737628102302551},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.4238618016242981},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.385319322347641},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3763272166252136},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3402496576309204},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2941676378250122},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21869885921478271},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0971699059009552}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5992421507835388},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5521860122680664},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5265324711799622},{"id":"https://openalex.org/C161624437","wikidata":"https://www.wikidata.org/wiki/Q1988322","display_name":"Small molecule","level":2,"score":0.4737628102302551},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.4238618016242981},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.385319322347641},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3763272166252136},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3402496576309204},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2941676378250122},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21869885921478271},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0971699059009552},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051188","descriptor_name":"Knowledge Bases","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-365","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-365","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-365","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20594344","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20594344","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:9b2272dbe66c450ab8525424edec99e0","is_oa":true,"landing_page_url":"https://doaj.org/article/9b2272dbe66c450ab8525424edec99e0","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 365 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2909224","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2909224","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-365","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-365","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-365","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2063291655.pdf","grobid_xml":"https://content.openalex.org/works/W2063291655.grobid-xml"},"referenced_works_count":74,"referenced_works":["https://openalex.org/W1505791519","https://openalex.org/W1517566065","https://openalex.org/W1527927437","https://openalex.org/W1758070551","https://openalex.org/W1819481941","https://openalex.org/W1947762817","https://openalex.org/W1963826858","https://openalex.org/W1964640688","https://openalex.org/W1966168239","https://openalex.org/W1967293793","https://openalex.org/W1969051510","https://openalex.org/W1974499817","https://openalex.org/W1986199568","https://openalex.org/W1993046136","https://openalex.org/W2003066987","https://openalex.org/W2003656858","https://openalex.org/W2004175162","https://openalex.org/W2004589024","https://openalex.org/W2006421122","https://openalex.org/W2030860488","https://openalex.org/W2035333716","https://openalex.org/W2036792999","https://openalex.org/W2043543538","https://openalex.org/W2043886357","https://openalex.org/W2049355199","https://openalex.org/W2050330741","https://openalex.org/W2055147198","https://openalex.org/W2078247418","https://openalex.org/W2082972649","https://openalex.org/W2083654996","https://openalex.org/W2089639709","https://openalex.org/W2090699441","https://openalex.org/W2090794687","https://openalex.org/W2091563009","https://openalex.org/W2094148990","https://openalex.org/W2095521702","https://openalex.org/W2096525273","https://openalex.org/W2102017976","https://openalex.org/W2103150692","https://openalex.org/W2104760790","https://openalex.org/W2105826842","https://openalex.org/W2105902442","https://openalex.org/W2108302275","https://openalex.org/W2109872885","https://openalex.org/W2112109058","https://openalex.org/W2113944588","https://openalex.org/W2114470098","https://openalex.org/W2115595474","https://openalex.org/W2119498937","https://openalex.org/W2122849532","https://openalex.org/W2124018463","https://openalex.org/W2124641497","https://openalex.org/W2126048802","https://openalex.org/W2127553917","https://openalex.org/W2127866370","https://openalex.org/W2128402268","https://openalex.org/W2132395520","https://openalex.org/W2135043797","https://openalex.org/W2140407975","https://openalex.org/W2143011057","https://openalex.org/W2144258433","https://openalex.org/W2144477832","https://openalex.org/W2149044412","https://openalex.org/W2151311229","https://openalex.org/W2153463820","https://openalex.org/W2153613893","https://openalex.org/W2156207120","https://openalex.org/W2157892451","https://openalex.org/W2158020463","https://openalex.org/W2158714788","https://openalex.org/W2162335096","https://openalex.org/W2164813401","https://openalex.org/W4230224839","https://openalex.org/W4231041617"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W3143642740","https://openalex.org/W2169918901","https://openalex.org/W2167226024"],"abstract_inverted_index":{"A":[0],"new":[1],"algorithm":[2],"has":[3],"been":[4],"developed":[5],"to":[6],"predict":[7],"binding":[8],"sites":[9],"with":[10],"high":[11],"accuracy":[12],"in":[13],"terms":[14],"of":[15],"their":[16],"biological":[17],"validity.":[18],"It":[19],"also":[20],"provides":[21],"a":[22,43],"common":[23],"platform":[24],"for":[25,31,42],"function":[26],"prediction,":[27],"knowledge-based":[28],"docking":[29],"and":[30],"small":[32],"molecule":[33],"virtual":[34],"screening.":[35],"The":[36,48],"method":[37,49],"can":[38],"be":[39],"applied":[40],"even":[41],"query":[44],"sequence":[45],"without":[46],"structure.":[47],"is":[50],"available":[51],"at":[52],"http://www.ncbi.nlm.nih.gov/Structure/ibis/ibis.cgi.":[53]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":5}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
