{"id":"https://openalex.org/W2117960318","doi":"https://doi.org/10.1186/1471-2105-11-290","title":"Revealing and avoiding bias in semantic similarity scores for protein pairs","display_name":"Revealing and avoiding bias in semantic similarity scores for protein pairs","publication_year":2010,"publication_date":"2010-05-28","ids":{"openalex":"https://openalex.org/W2117960318","doi":"https://doi.org/10.1186/1471-2105-11-290","mag":"2117960318","pmid":"https://pubmed.ncbi.nlm.nih.gov/20509916"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-290","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-290","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-290","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-290","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100378469","display_name":"Jing Wang","orcid":"https://orcid.org/0000-0002-2512-0223"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Jing Wang","raw_affiliation_strings":["Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China","Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu 610054, China","institution_ids":[]},{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058559125","display_name":"Xianxiao Zhou","orcid":"https://orcid.org/0000-0001-9350-4467"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xianxiao Zhou","raw_affiliation_strings":["Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101811772","display_name":"Jing Zhu","orcid":"https://orcid.org/0000-0002-9039-6533"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jing Zhu","raw_affiliation_strings":["Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062902968","display_name":"Chenggui Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenggui Zhou","raw_affiliation_strings":["Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087055335","display_name":"Zheng Guo","orcid":"https://orcid.org/0000-0003-4466-6026"},"institutions":[{"id":"https://openalex.org/I150229711","display_name":"University of Electronic Science and Technology of China","ror":"https://ror.org/04qr3zq92","country_code":"CN","type":"education","lineage":["https://openalex.org/I150229711"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zheng Guo","raw_affiliation_strings":["Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150086, China","College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China","Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, 610054, China","institution_ids":["https://openalex.org/I150229711"]},{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150086, China","institution_ids":["https://openalex.org/I156144747"]},{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, China","institution_ids":["https://openalex.org/I156144747"]},{"raw_affiliation_string":"Bioinformatics Centre, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China","institution_ids":["https://openalex.org/I150229711"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5100378469"],"corresponding_institution_ids":["https://openalex.org/I150229711"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.9819,"has_fulltext":true,"cited_by_count":47,"citation_normalized_percentile":{"value":0.91511236,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"11","issue":"1","first_page":"290","last_page":"290"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.8598060607910156},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.677640438079834},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5748938322067261},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5656387805938721},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3782087564468384},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.377509742975235},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.3661808371543884},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.32762399315834045},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3156541883945465}],"concepts":[{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.8598060607910156},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.677640438079834},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5748938322067261},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5656387805938721},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3782087564468384},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.377509742975235},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.3661808371543884},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.32762399315834045},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3156541883945465},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/1471-2105-11-290","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-290","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-290","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20509916","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20509916","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:62949f22478b4153b81680e05013d0b7","is_oa":true,"landing_page_url":"https://doaj.org/article/62949f22478b4153b81680e05013d0b7","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 290 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2903568","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2903568","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-290","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-290","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-290","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3263722376","display_name":null,"funder_award_id":"30970668","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8070914166","display_name":null,"funder_award_id":"30571034","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2117960318.pdf","grobid_xml":"https://content.openalex.org/works/W2117960318.grobid-xml"},"referenced_works_count":91,"referenced_works":["https://openalex.org/W88719000","https://openalex.org/W102626146","https://openalex.org/W191432208","https://openalex.org/W222266893","https://openalex.org/W1537494447","https://openalex.org/W1552669063","https://openalex.org/W1605637875","https://openalex.org/W1647729745","https://openalex.org/W1925105768","https://openalex.org/W1966864071","https://openalex.org/W1970239938","https://openalex.org/W1973973036","https://openalex.org/W1980922062","https://openalex.org/W1980948656","https://openalex.org/W1982857867","https://openalex.org/W1985307298","https://openalex.org/W1986566140","https://openalex.org/W1989034333","https://openalex.org/W1989684700","https://openalex.org/W1998259086","https://openalex.org/W2000819248","https://openalex.org/W2006124679","https://openalex.org/W2006762667","https://openalex.org/W2009234149","https://openalex.org/W2017936606","https://openalex.org/W2034784092","https://openalex.org/W2035595951","https://openalex.org/W2037225069","https://openalex.org/W2039235696","https://openalex.org/W2041884394","https://openalex.org/W2044340941","https://openalex.org/W2045729458","https://openalex.org/W2046618236","https://openalex.org/W2046831513","https://openalex.org/W2061615066","https://openalex.org/W2070412833","https://openalex.org/W2072372949","https://openalex.org/W2078483536","https://openalex.org/W2079574756","https://openalex.org/W2081415962","https://openalex.org/W2083045667","https://openalex.org/W2084168100","https://openalex.org/W2095560417","https://openalex.org/W2097324953","https://openalex.org/W2097521365","https://openalex.org/W2097795961","https://openalex.org/W2103017472","https://openalex.org/W2104261859","https://openalex.org/W2105813018","https://openalex.org/W2106289940","https://openalex.org/W2108929223","https://openalex.org/W2109047523","https://openalex.org/W2110065044","https://openalex.org/W2110595429","https://openalex.org/W2113258769","https://openalex.org/W2116117181","https://openalex.org/W2116603180","https://openalex.org/W2117805756","https://openalex.org/W2119412782","https://openalex.org/W2119943416","https://openalex.org/W2120155048","https://openalex.org/W2121343862","https://openalex.org/W2124649657","https://openalex.org/W2127053639","https://openalex.org/W2127563440","https://openalex.org/W2128049108","https://openalex.org/W2130962401","https://openalex.org/W2131323902","https://openalex.org/W2131674595","https://openalex.org/W2132056568","https://openalex.org/W2135738422","https://openalex.org/W2136851956","https://openalex.org/W2142304903","https://openalex.org/W2145860140","https://openalex.org/W2147069866","https://openalex.org/W2149605741","https://openalex.org/W2151967815","https://openalex.org/W2157663959","https://openalex.org/W2159348493","https://openalex.org/W2159413587","https://openalex.org/W2166481425","https://openalex.org/W2168264491","https://openalex.org/W2169896388","https://openalex.org/W2170522882","https://openalex.org/W2298031700","https://openalex.org/W2312070181","https://openalex.org/W2483891037","https://openalex.org/W2531563875","https://openalex.org/W4235457527","https://openalex.org/W4248180311","https://openalex.org/W4248415074"],"related_works":["https://openalex.org/W4376653378","https://openalex.org/W2114797768","https://openalex.org/W2380654781","https://openalex.org/W2176214140","https://openalex.org/W2516873349","https://openalex.org/W2898077673","https://openalex.org/W4385239468","https://openalex.org/W4200476258","https://openalex.org/W1990601549","https://openalex.org/W2022470916"],"abstract_inverted_index":{"Current":[0],"semantic":[1,29],"similarity":[2,30],"measures":[3],"for":[4],"protein":[5,11],"pairs":[6],"are":[7,15,25],"highly":[8],"dependent":[9],"on":[10,27,38],"annotation":[12],"lengths,":[13],"which":[14],"subject":[16],"to":[17,55],"biological":[18],"research":[19],"bias.":[20],"This":[21],"affects":[22],"applications":[23],"that":[24,36],"based":[26],"these":[28],"scores,":[31],"especially":[32],"in":[33,45],"clustering":[34],"studies":[35],"rely":[37],"score":[39],"magnitudes.":[40],"The":[41],"normalized":[42],"scores":[43],"proposed":[44],"this":[46,53],"paper":[47],"can":[48],"reduce":[49],"the":[50],"effects":[51],"of":[52],"bias":[54],"some":[56],"extent.":[57]},"counts_by_year":[{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":8},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
