{"id":"https://openalex.org/W2145259857","doi":"https://doi.org/10.1186/1471-2105-11-277","title":"Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context","display_name":"Prediction of breast cancer prognosis using gene set statistics provides signature stability and biological context","publication_year":2010,"publication_date":"2010-05-25","ids":{"openalex":"https://openalex.org/W2145259857","doi":"https://doi.org/10.1186/1471-2105-11-277","mag":"2145259857","pmid":"https://pubmed.ncbi.nlm.nih.gov/20500821"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-277","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-277","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-277","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-277","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5037544210","display_name":"Gad Abraham","orcid":"https://orcid.org/0000-0003-4853-0118"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Gad Abraham","raw_affiliation_strings":["Department of Computer Science and Software Engineering, The University of Melbourne, Parkville 3010, VIC, Australia","Department of Computer Science and Software Engineering, The University of Melbourne, Parkville, 3010, VIC, Australia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Software Engineering, The University of Melbourne, Parkville 3010, VIC, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Department of Computer Science and Software Engineering, The University of Melbourne, Parkville, 3010, VIC, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101601191","display_name":"Adam Kowalczyk","orcid":"https://orcid.org/0000-0001-9068-3383"},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Adam Kowalczyk","raw_affiliation_strings":["NICTA Victoria Laboratory, The University of Melbourne, Parkville, 3010, VIC, Australia"],"affiliations":[{"raw_affiliation_string":"NICTA Victoria Laboratory, The University of Melbourne, Parkville, 3010, VIC, Australia","institution_ids":["https://openalex.org/I165779595","https://openalex.org/I42894916"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010278367","display_name":"Sherene Loi","orcid":"https://orcid.org/0000-0001-6137-9171"},"institutions":[{"id":"https://openalex.org/I2800555584","display_name":"Peter MacCallum Cancer Centre","ror":"https://ror.org/02a8bt934","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I2800555584"]},{"id":"https://openalex.org/I2801838318","display_name":"Institut Jules Bordet","ror":"https://ror.org/05e8s8534","country_code":"BE","type":"healthcare","lineage":["https://openalex.org/I2801838318"]}],"countries":["AU","BE"],"is_corresponding":false,"raw_author_name":"Sherene Loi","raw_affiliation_strings":["Department of Medical Oncology, Peter MacCallum Cancer Centre, East Melbourne, VIC, 3002, Australia","Department of Translational Research and Functional Genomics Unit, Jules Bordet Institute, Brussels, Belgium"],"affiliations":[{"raw_affiliation_string":"Department of Medical Oncology, Peter MacCallum Cancer Centre, East Melbourne, VIC, 3002, Australia","institution_ids":["https://openalex.org/I2800555584"]},{"raw_affiliation_string":"Department of Translational Research and Functional Genomics Unit, Jules Bordet Institute, Brussels, Belgium","institution_ids":["https://openalex.org/I2801838318"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112903849","display_name":"Izhak Haviv","orcid":null},"institutions":[{"id":"https://openalex.org/I2800555584","display_name":"Peter MacCallum Cancer Centre","ror":"https://ror.org/02a8bt934","country_code":"AU","type":"healthcare","lineage":["https://openalex.org/I2800555584"]},{"id":"https://openalex.org/I142471025","display_name":"Baker Heart and Diabetes Institute","ror":"https://ror.org/03rke0285","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I142471025"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Izhak Haviv","raw_affiliation_strings":["Department of Biochemistry, School of Medicine, University of Melbourne, VIC, 3010, Australia","Metastasis Research Laboratory, Peter MacCallum Cancer Centre, East Melbourne, VIC, 3002, Australia","The Blood and DNA Profiling Facility, Baker IDI Institute, Prahran, VIC, 3004, Australia"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry, School of Medicine, University of Melbourne, VIC, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Metastasis Research Laboratory, Peter MacCallum Cancer Centre, East Melbourne, VIC, 3002, Australia","institution_ids":["https://openalex.org/I2800555584"]},{"raw_affiliation_string":"The Blood and DNA Profiling Facility, Baker IDI Institute, Prahran, VIC, 3004, Australia","institution_ids":["https://openalex.org/I142471025"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5041495909","display_name":"Justin Zobel","orcid":"https://orcid.org/0000-0001-6622-032X"},"institutions":[{"id":"https://openalex.org/I42894916","display_name":"Data61","ror":"https://ror.org/03q397159","country_code":"AU","type":"other","lineage":["https://openalex.org/I1292875679","https://openalex.org/I2801453606","https://openalex.org/I42894916","https://openalex.org/I4387156119"]},{"id":"https://openalex.org/I165779595","display_name":"University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Justin Zobel","raw_affiliation_strings":["Department of Computer Science and Software Engineering, The University of Melbourne, Parkville, 3010, VIC, Australia","NICTA Victoria Laboratory, The University of Melbourne, Parkville, 3010, VIC, Australia"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Software Engineering, The University of Melbourne, Parkville, 3010, VIC, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"NICTA Victoria Laboratory, The University of Melbourne, Parkville, 3010, VIC, Australia","institution_ids":["https://openalex.org/I165779595","https://openalex.org/I42894916"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5037544210"],"corresponding_institution_ids":["https://openalex.org/I165779595"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.3885,"has_fulltext":true,"cited_by_count":87,"citation_normalized_percentile":{"value":0.92937014,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"11","issue":"1","first_page":"277","last_page":"277"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9851999878883362,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6925694942474365},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6422037482261658},{"id":"https://openalex.org/keywords/breast-cancer","display_name":"Breast cancer","score":0.6371787190437317},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6234021782875061},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6189259886741638},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5714001655578613},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.5312777757644653},{"id":"https://openalex.org/keywords/microarray-analysis-techniques","display_name":"Microarray analysis techniques","score":0.512017548084259},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.4872092604637146},{"id":"https://openalex.org/keywords/microarray","display_name":"Microarray","score":0.4696504473686218},{"id":"https://openalex.org/keywords/gene-signature","display_name":"Gene signature","score":0.46545130014419556},{"id":"https://openalex.org/keywords/statistic","display_name":"Statistic","score":0.4500175714492798},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.38068342208862305},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3718774914741516},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.32043346762657166},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.15156301856040955},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.09809049963951111}],"concepts":[{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6925694942474365},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6422037482261658},{"id":"https://openalex.org/C530470458","wikidata":"https://www.wikidata.org/wiki/Q128581","display_name":"Breast cancer","level":3,"score":0.6371787190437317},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6234021782875061},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6189259886741638},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5714001655578613},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.5312777757644653},{"id":"https://openalex.org/C8415881","wikidata":"https://www.wikidata.org/wiki/Q6839217","display_name":"Microarray analysis techniques","level":4,"score":0.512017548084259},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.4872092604637146},{"id":"https://openalex.org/C186836561","wikidata":"https://www.wikidata.org/wiki/Q1931516","display_name":"Microarray","level":4,"score":0.4696504473686218},{"id":"https://openalex.org/C2779733811","wikidata":"https://www.wikidata.org/wiki/Q5531562","display_name":"Gene signature","level":4,"score":0.46545130014419556},{"id":"https://openalex.org/C89128539","wikidata":"https://www.wikidata.org/wiki/Q1949963","display_name":"Statistic","level":2,"score":0.4500175714492798},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.38068342208862305},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3718774914741516},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.32043346762657166},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.15156301856040955},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.09809049963951111},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011379","descriptor_name":"Prognosis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014408","descriptor_name":"Biomarkers, Tumor","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/1471-2105-11-277","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-277","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-277","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20500821","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20500821","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/263838","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/263838","pdf_url":"http://hdl.handle.net/11343/263838","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:dipot.ulb.ac.be:2013/117810","is_oa":true,"landing_page_url":"http://hdl.handle.net/2013/ULB-DIPOT:oai:dipot.ulb.ac.be:2013/117810","pdf_url":null,"source":{"id":"https://openalex.org/S4306401063","display_name":"D\u00e9p\u00f4t institutionnel de l'Universit\u00e9 libre de Bruxelles (Universit\u00e9 Libre de Bruxelles)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I132053463","host_organization_name":"Universit\u00e9 Libre de Bruxelles","host_organization_lineage":["https://openalex.org/I132053463"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC bioinformatics, 11","raw_type":"info:ulb-repo/semantics/openurl/article"},{"id":"pmh:oai:doaj.org/article:3c7b925d2cdc4038bf4f9a422240783e","is_oa":true,"landing_page_url":"https://doaj.org/article/3c7b925d2cdc4038bf4f9a422240783e","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 277 (2010)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2895626","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2895626","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-277","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-277","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-277","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.7699999809265137,"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G6194240451","display_name":"National ICT Australia","funder_award_id":"NICTA","funder_id":"https://openalex.org/F4320334704","funder_display_name":"Australian Research Council"},{"id":"https://openalex.org/G7859417660","display_name":null,"funder_award_id":"NHMRC","funder_id":"https://openalex.org/F4320334704","funder_display_name":"Australian Research Council"}],"funders":[{"id":"https://openalex.org/F4320315885","display_name":"Australian Government","ror":"https://ror.org/0314h5y94"},{"id":"https://openalex.org/F4320334626","display_name":"Medical Research Council","ror":"https://ror.org/03x94j517"},{"id":"https://openalex.org/F4320334704","display_name":"Australian Research Council","ror":"https://ror.org/05mmh0f86"},{"id":"https://openalex.org/F4320334705","display_name":"National Health and Medical Research Council","ror":"https://ror.org/011kf5r70"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2145259857.pdf","grobid_xml":"https://content.openalex.org/works/W2145259857.grobid-xml"},"referenced_works_count":70,"referenced_works":["https://openalex.org/W1480376833","https://openalex.org/W1504738275","https://openalex.org/W1528177290","https://openalex.org/W1966626540","https://openalex.org/W1968005447","https://openalex.org/W1976173969","https://openalex.org/W1983463159","https://openalex.org/W1992045522","https://openalex.org/W2003124695","https://openalex.org/W2003605043","https://openalex.org/W2012009763","https://openalex.org/W2016027155","https://openalex.org/W2018116321","https://openalex.org/W2020541351","https://openalex.org/W2020859582","https://openalex.org/W2034223032","https://openalex.org/W2058451329","https://openalex.org/W2067245109","https://openalex.org/W2068474065","https://openalex.org/W2074465378","https://openalex.org/W2080719056","https://openalex.org/W2087446092","https://openalex.org/W2088160256","https://openalex.org/W2091947792","https://openalex.org/W2098421151","https://openalex.org/W2103017472","https://openalex.org/W2105260721","https://openalex.org/W2113957930","https://openalex.org/W2115580179","https://openalex.org/W2115709314","https://openalex.org/W2123106337","https://openalex.org/W2123363536","https://openalex.org/W2124640147","https://openalex.org/W2128985829","https://openalex.org/W2129296674","https://openalex.org/W2130410032","https://openalex.org/W2134736660","https://openalex.org/W2135681892","https://openalex.org/W2136362180","https://openalex.org/W2139522545","https://openalex.org/W2141007997","https://openalex.org/W2148267504","https://openalex.org/W2150533948","https://openalex.org/W2150671673","https://openalex.org/W2151937508","https://openalex.org/W2153684756","https://openalex.org/W2154947819","https://openalex.org/W2156273110","https://openalex.org/W2157132621","https://openalex.org/W2157446225","https://openalex.org/W2157825442","https://openalex.org/W2157840751","https://openalex.org/W2157963336","https://openalex.org/W2159482845","https://openalex.org/W2160450758","https://openalex.org/W2160697532","https://openalex.org/W2163563958","https://openalex.org/W2165776880","https://openalex.org/W2167119716","https://openalex.org/W2167190345","https://openalex.org/W2169160999","https://openalex.org/W2170602872","https://openalex.org/W2260541909","https://openalex.org/W2797177778","https://openalex.org/W3015973740","https://openalex.org/W3021971632","https://openalex.org/W3119651796","https://openalex.org/W3175417087","https://openalex.org/W4245024447","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2041540252","https://openalex.org/W1996185163","https://openalex.org/W170658859","https://openalex.org/W2081127504","https://openalex.org/W1483316219","https://openalex.org/W4310366902","https://openalex.org/W3023720143","https://openalex.org/W2183420549","https://openalex.org/W2081507994","https://openalex.org/W1972696957"],"abstract_inverted_index":{"To":[0],"date,":[1],"most":[2],"analyses":[3],"of":[4,13,23],"gene":[5,29],"expression":[6],"data":[7,26],"have":[8],"focused":[9],"at":[10],"the":[11,14,25,33,41],"level":[12],"individual":[15],"genes.":[16],"We":[17],"show":[18],"that":[19],"a":[20],"complementary":[21],"approach":[22],"examining":[24],"using":[27],"predefined":[28],"sets":[30],"can":[31],"reduce":[32],"noise":[34],"and":[35],"could":[36],"provide":[37],"increased":[38],"insight":[39],"into":[40],"underlying":[42],"biological":[43],"pathways.":[44]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":16},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":11}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
