{"id":"https://openalex.org/W1996549514","doi":"https://doi.org/10.1186/1471-2105-11-249","title":"Gene bi-targeting by viral and human miRNAs","display_name":"Gene bi-targeting by viral and human miRNAs","publication_year":2010,"publication_date":"2010-05-13","ids":{"openalex":"https://openalex.org/W1996549514","doi":"https://doi.org/10.1186/1471-2105-11-249","mag":"1996549514","pmid":"https://pubmed.ncbi.nlm.nih.gov/20465802"},"language":"en","primary_location":{"id":"doi:10.1186/1471-2105-11-249","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-249","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-249","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-249","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5062614879","display_name":"Isana Veksler\u2010Lublinsky","orcid":"https://orcid.org/0000-0002-4251-6158"},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Isana Veksler-Lublinsky","raw_affiliation_strings":["Department of Computer Science, Ben-Gurion University, Beer-Sheva 84105, Israel. zivukelson@gmail.com","Department of Computer Science, Ben Gurion University, Beer Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Ben-Gurion University, Beer-Sheva 84105, Israel. zivukelson@gmail.com","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Department of Computer Science, Ben Gurion University, Beer Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056892922","display_name":"Yonat Shemer\u2010Avni","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Yonat Shemer-Avni","raw_affiliation_strings":["Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, 84105, Israel","Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Virology and Developmental Genetics/Health Sciences, Ben-Gurion University, Beer-Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033593347","display_name":"Klara Kedem","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":false,"raw_author_name":"Klara Kedem","raw_affiliation_strings":["Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","Department of Computer Science, Ben Gurion University, Beer Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Department of Computer Science, Ben Gurion University, Beer Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048383219","display_name":"Michal Ziv-Ukelson","orcid":null},"institutions":[{"id":"https://openalex.org/I124227911","display_name":"Ben-Gurion University of the Negev","ror":"https://ror.org/05tkyf982","country_code":"IL","type":"education","lineage":["https://openalex.org/I124227911"]}],"countries":["IL"],"is_corresponding":true,"raw_author_name":"Michal Ziv-Ukelson","raw_affiliation_strings":["Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","Department of Computer Science, Ben Gurion University, Beer Sheva, Israel"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Ben-Gurion University, Beer-Sheva, 84105, Israel","institution_ids":["https://openalex.org/I124227911"]},{"raw_affiliation_string":"Department of Computer Science, Ben Gurion University, Beer Sheva, Israel","institution_ids":["https://openalex.org/I124227911"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5048383219"],"corresponding_institution_ids":["https://openalex.org/I124227911"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":0.9257,"has_fulltext":true,"cited_by_count":33,"citation_normalized_percentile":{"value":0.75675219,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"11","issue":"1","first_page":"249","last_page":"249"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9442999958992004,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9442999958992004,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.005900000222027302,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.005100000184029341,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8152796030044556},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.7970209121704102},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6824156045913696},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6506222486495972},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5797110795974731},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5218304991722107},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.5206477046012878},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.49298354983329773},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4915538728237152}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8152796030044556},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.7970209121704102},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6824156045913696},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6506222486495972},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5797110795974731},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5218304991722107},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.5206477046012878},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.49298354983329773},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4915538728237152}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004854","descriptor_name":"Herpesvirus 4, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004854","descriptor_name":"Herpesvirus 4, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004854","descriptor_name":"Herpesvirus 4, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004854","descriptor_name":"Herpesvirus 4, Human","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012323","descriptor_name":"RNA Processing, Post-Transcriptional","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012367","descriptor_name":"RNA, Viral","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/1471-2105-11-249","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-249","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-249","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:20465802","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20465802","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:2579890","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3583137","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3583137","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3583137","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:db8a08bc9390483e9a543aec6f6f39aa","is_oa":true,"landing_page_url":"https://doaj.org/article/db8a08bc9390483e9a543aec6f6f39aa","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 11, Iss 1, p 249 (2010)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/1471-2105-11-249","is_oa":true,"landing_page_url":"https://doi.org/10.1186/1471-2105-11-249","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/1471-2105-11-249","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1996549514.pdf","grobid_xml":"https://content.openalex.org/works/W1996549514.grobid-xml"},"referenced_works_count":87,"referenced_works":["https://openalex.org/W938539187","https://openalex.org/W1481189688","https://openalex.org/W1486659038","https://openalex.org/W1513416145","https://openalex.org/W1536020257","https://openalex.org/W1648301895","https://openalex.org/W1890374229","https://openalex.org/W1918304741","https://openalex.org/W1965893507","https://openalex.org/W1966427699","https://openalex.org/W1969003435","https://openalex.org/W1972640951","https://openalex.org/W1976077409","https://openalex.org/W1977372263","https://openalex.org/W1978089275","https://openalex.org/W1978337436","https://openalex.org/W1985563073","https://openalex.org/W1990061958","https://openalex.org/W1994161108","https://openalex.org/W1996557380","https://openalex.org/W2001279251","https://openalex.org/W2002980277","https://openalex.org/W2010493387","https://openalex.org/W2026520054","https://openalex.org/W2027434506","https://openalex.org/W2027952293","https://openalex.org/W2032323486","https://openalex.org/W2032766715","https://openalex.org/W2033595939","https://openalex.org/W2036534625","https://openalex.org/W2037602045","https://openalex.org/W2040191060","https://openalex.org/W2042742026","https://openalex.org/W2044800314","https://openalex.org/W2047119105","https://openalex.org/W2047399907","https://openalex.org/W2050869737","https://openalex.org/W2055309264","https://openalex.org/W2060468039","https://openalex.org/W2063317473","https://openalex.org/W2066484007","https://openalex.org/W2066848701","https://openalex.org/W2071744122","https://openalex.org/W2071909988","https://openalex.org/W2072554988","https://openalex.org/W2073825741","https://openalex.org/W2074815090","https://openalex.org/W2079053367","https://openalex.org/W2083381199","https://openalex.org/W2087462807","https://openalex.org/W2087732778","https://openalex.org/W2089142809","https://openalex.org/W2090975474","https://openalex.org/W2091576301","https://openalex.org/W2094253263","https://openalex.org/W2094284771","https://openalex.org/W2094515886","https://openalex.org/W2102597691","https://openalex.org/W2103017472","https://openalex.org/W2108668859","https://openalex.org/W2112881364","https://openalex.org/W2115503551","https://openalex.org/W2119066197","https://openalex.org/W2120456037","https://openalex.org/W2123626443","https://openalex.org/W2124745612","https://openalex.org/W2125879257","https://openalex.org/W2129706781","https://openalex.org/W2131591844","https://openalex.org/W2133866843","https://openalex.org/W2134118500","https://openalex.org/W2144544802","https://openalex.org/W2146171942","https://openalex.org/W2149146453","https://openalex.org/W2149785901","https://openalex.org/W2152274187","https://openalex.org/W2153195747","https://openalex.org/W2161292296","https://openalex.org/W2162674813","https://openalex.org/W2163199119","https://openalex.org/W2167669999","https://openalex.org/W2167977613","https://openalex.org/W2753176400","https://openalex.org/W2910065277","https://openalex.org/W4240861547","https://openalex.org/W4249958171","https://openalex.org/W4254867250"],"related_works":["https://openalex.org/W106077234","https://openalex.org/W2041374557","https://openalex.org/W2081929287","https://openalex.org/W2132561013","https://openalex.org/W2128583238","https://openalex.org/W2144348650","https://openalex.org/W1994852842","https://openalex.org/W2049907435","https://openalex.org/W4246178523","https://openalex.org/W2034377088"],"abstract_inverted_index":{"BACKGROUND:":[0],"MicroRNAs":[1],"(miRNAs)":[2],"are":[3,138,160,179,261],"an":[4,280],"abundant":[5],"class":[6],"of":[7,21,47,122,151,195,254,272,287,300],"small":[8],"noncoding":[9],"RNAs":[10],"(20-24":[11],"nts)":[12],"that":[13,62,127,137,306],"can":[14,294],"affect":[15],"gene":[16,112,131],"expression":[17,213],"by":[18,49],"post-transcriptional":[19,130],"regulation":[20],"mRNAs.":[22,53],"They":[23],"play":[24,308],"important":[25],"roles":[26],"in":[27,129,140,162,174,309],"several":[28],"biological":[29,142,248,274],"processes":[30],"(e.g.,":[31],"development":[32],"and":[33,70,83,86,91,106,124,133,149,153,171,183,187,215,220,228,234,249,259,289,303],"cell":[34],"cycle":[35],"regulation).":[36],"Numerous":[37],"bioinformatics":[38],"methods":[39,222],"have":[40,223],"been":[41,224],"developed":[42],"to":[43,64,76,96,101,119,278,296],"identify":[44,102,120],"the":[45,65,78,221,304],"function":[46],"miRNAs":[48,85,108,126,150,233,307],"predicting":[50],"their":[51,71,87,134],"target":[52,135,185],"Some":[54],"viral":[55,82,90,105,123,154,288],"organisms":[56],"also":[57],"encode":[58],"miRNAs,":[59],"a":[60,117,163,181,189,297],"fact":[61],"contributes":[63],"complex":[66],"interactions":[67,302],"between":[68,81],"viruses":[69],"hosts.":[72],"A":[73],"need":[74],"arises":[75],"understand":[77],"functional":[79],"relationship":[80],"host":[84,92,107,111,125],"effect":[88],"on":[89,226],"genes.":[93],"Our":[94,218,257],"approach":[95,282],"meet":[97],"this":[98,175,201],"challenge":[99],"is":[100,172,276],"modules":[103,159,286,293],"where":[104],"cooperatively":[109],"regulate":[110],"expression.":[113],"RESULTS:":[114],"We":[115,144,243],"present":[116],"method":[118,191],"groups":[121,147],"cooperate":[128],"regulation,":[132],"genes":[136],"involved":[139],"similar":[141],"processes.":[143],"call":[145,169],"these":[146],"(genes":[148],"human":[152,227,235,290],"origin)":[155],"-":[156],"modules.":[157,242,256],"The":[158,177,266],"found":[161,240],"new":[164,182,190],"two-stage":[165],"procedure,":[166],"which":[167,238,269],"we":[168,203,239],"bi-targeting,":[170],"presented":[173,267],"paper.":[176],"stages":[178],"(i)":[180],"efficient":[184,281],"prediction,":[186],"(ii)":[188],"for":[192,237,252,283],"clustering":[193],"objects":[194],"three":[196],"different":[197],"data":[198,260],"types.":[199],"In":[200],"work":[202],"integrate":[204],"multiple":[205],"information":[206],"sources,":[207],"including":[208],"miRNA-target":[209],"binding":[210],"information,":[211],"miRNA":[212],"profiles,":[214],"GO":[216],"annotations.":[217],"hypotheses":[219],"tested":[225],"Epstein":[229],"Barr":[230],"virus":[231],"(EBV)":[232],"genes,":[236],"34":[241],"provide":[244],"supporting":[245],"evidence":[246],"from":[247],"medical":[250],"literature":[251],"two":[253],"our":[255],"code":[258],"available":[262],"at":[263],"http://www.cs.bgu.ac.il/~vaksler/BiTargeting.htm":[264],"CONCLUSIONS:":[265],"algorithm,":[268],"makes":[270],"use":[271],"diverse":[273],"data,":[275],"demonstrated":[277],"be":[279],"finding":[284],"bi-targeting":[285],"miRNAs.":[291],"These":[292],"contribute":[295],"better":[298],"understanding":[299],"viral-host":[301],"role":[305],"them.":[310]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":6},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
